BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017755
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...    79   6e-13
ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chlor...    79   6e-13
ref|XP_003527651.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...    78   1e-12
ref|XP_003523282.1| PREDICTED: RNA pseudourine synthase 2, chlor...    76   7e-12
ref|XP_002301949.1| predicted protein [Populus trichocarpa] gi|2...    75   2e-11

>ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 2,
           chloroplastic-like [Cucumis sativus]
          Length = 452

 Score = 79.3 bits (194), Expect = 6e-13
 Identities = 35/49 (71%), Positives = 40/49 (81%)
 Frame = -1

Query: 679 VSMLERPCLHALALGFKHPHTGERIKFSCAPPTDFVETLSLLRNMGSKK 533
           VS LERPCLHAL LGF HPHTG+ I+FSC PPTDF E LS LR +G++K
Sbjct: 377 VSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFTEILSQLREIGTQK 425


>ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cucumis
           sativus]
          Length = 453

 Score = 79.3 bits (194), Expect = 6e-13
 Identities = 35/49 (71%), Positives = 40/49 (81%)
 Frame = -1

Query: 679 VSMLERPCLHALALGFKHPHTGERIKFSCAPPTDFVETLSLLRNMGSKK 533
           VS LERPCLHAL LGF HPHTG+ I+FSC PPTDF E LS LR +G++K
Sbjct: 378 VSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFTEILSQLREIGTQK 426


>ref|XP_003527651.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 2,
           chloroplastic-like [Glycine max]
          Length = 441

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 34/51 (66%), Positives = 40/51 (78%)
 Frame = -1

Query: 679 VSMLERPCLHALALGFKHPHTGERIKFSCAPPTDFVETLSLLRNMGSKKTS 527
           VS L+RPCLHAL LGF+HPHTGE++ FSC PP DF E LS LR +GS+  S
Sbjct: 384 VSRLDRPCLHALTLGFQHPHTGEQVHFSCEPPADFAEILSQLRRIGSETVS 434


>ref|XP_003523282.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Glycine
           max]
          Length = 450

 Score = 75.9 bits (185), Expect = 7e-12
 Identities = 33/51 (64%), Positives = 39/51 (76%)
 Frame = -1

Query: 679 VSMLERPCLHALALGFKHPHTGERIKFSCAPPTDFVETLSLLRNMGSKKTS 527
           VS L+RPCLHA  LGF+HPHTGE++ FSC PP DF E LS LR +GS+  S
Sbjct: 393 VSRLDRPCLHAWTLGFQHPHTGEQVHFSCEPPADFAEILSQLRRIGSETVS 443


>ref|XP_002301949.1| predicted protein [Populus trichocarpa] gi|222843675|gb|EEE81222.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 35/53 (66%), Positives = 40/53 (75%)
 Frame = -1

Query: 679 VSMLERPCLHALALGFKHPHTGERIKFSCAPPTDFVETLSLLRNMGSKKTSLE 521
           +S LERPCLHALALGF HP TG+ I FSC PP DF E LS LR MG++K S +
Sbjct: 391 LSGLERPCLHALALGFTHPCTGKEIHFSCPPPPDFTEILSQLREMGTEKLSFK 443