BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017744
         (1827 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containi...   885   0.0  
ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containi...   815   0.0  
ref|XP_002301973.1| predicted protein [Populus trichocarpa] gi|2...   808   0.0  
emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]   791   0.0  
ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containi...   769   0.0  

>ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
            [Vitis vinifera]
          Length = 758

 Score =  885 bits (2288), Expect = 0.0
 Identities = 420/564 (74%), Positives = 478/564 (84%)
 Frame = -1

Query: 1827 CVDKAKELFEEMTSFGVEPNLVSWNGLIAGFNQNGYLSESVSVLCRMHSEGFVPDGTTIS 1648
            CVD+AK LF EM   GV+PNL+SWNG+IAGFN +G  SE+V +   MH  GF PDGTTIS
Sbjct: 195  CVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTIS 254

Query: 1647 CVLPVVGDLQDSKMGIQIHGYVVKQGLEGDNCVVCALVDMYGKCGCPFEMKRVFYELARM 1468
             VLP VGDL+D  MGI IHGYV+KQGL  D CV  AL+DMYGKC C  EM +VF ++  M
Sbjct: 255  SVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHM 314

Query: 1467 DLGSCNALVSGLSRNGLVDDALHTFMQFKDQEIELNVVSWTSIIACCTQNGKDIEALELF 1288
            D+GSCNA + GLSRNG V+ +L  F Q KDQ +ELNVVSWTS+IACC+QNG+DIEALELF
Sbjct: 315  DVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELF 374

Query: 1287 REMQLAGVKPNSVTIPCLLPACSNIAALMHGKAAHCYSLRRGFSHNVYVGSSLVDMYAKC 1108
            REMQ+AGVKPNSVTIPCLLPAC NIAALMHGKAAHC+SLRRG S +VYVGS+L+DMYAKC
Sbjct: 375  REMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKC 434

Query: 1107 GKIVDSRNCFDRLPTKNLVCWNAIMHGYAMHGLAREAIDIFELMQRSEQKPDFISLNCVL 928
            G+I  SR CFD +PTKNLVCWNA++ GYAMHG A+EA++IF+LMQRS QKPD IS  CVL
Sbjct: 435  GRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVL 494

Query: 927  SACCQGGLTEKGRHYFNNMYQEHGIEARMEHYACMVTLLSRAGRLEEAYAMIKEMRSEPD 748
            SAC Q GLTE+G +YFN+M  ++GIEAR+EHYACMVTLLSRAG+LE+AYAMI+ M   PD
Sbjct: 495  SACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPD 554

Query: 747  ACVWGALLSSCRVHGNVSLGEVAANQLFELEPNNAGNYVLLSNIYAAKGMWKEVNRVRGV 568
            ACVWGALLSSCRVH NVSLGEVAA +LFELEP+N GNY+LLSNIYA+KGMW EVNRVR +
Sbjct: 555  ACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDM 614

Query: 567  MENLGLRKNPGCSWIEVKNKVHTLLAGDRSHPNMAQIIEKLERLGMEMKKSGYRPDTNFV 388
            M+N GLRKNPGCSWIEVKNKVH LLAGD+SHP M QIIEKL++L MEMKK GY P+ NFV
Sbjct: 615  MKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPEINFV 674

Query: 387  LQDVEEQDKENILCGHSEKLAVCLGLLSTPPGTCLRVIKNLRICGDCHTAIKFIARFEGR 208
            LQDVEEQDKE ILCGHSEKLAV  GLL+TPPG  L+VIKNLRICGDCH  IKFI+ FE R
Sbjct: 675  LQDVEEQDKEQILCGHSEKLAVVFGLLNTPPGYPLQVIKNLRICGDCHVVIKFISSFERR 734

Query: 207  EIYVRDTNRFHHFKDGLCSCGDYW 136
            EI+VRDTNRFHHFK+G CSCGDYW
Sbjct: 735  EIFVRDTNRFHHFKEGACSCGDYW 758



 Score =  154 bits (390), Expect = 6e-35
 Identities = 106/410 (25%), Positives = 192/410 (46%), Gaps = 37/410 (9%)
 Frame = -1

Query: 1776 EPNLVSWNGLIAGFNQNGYLSESVSVLCRMHSEGFVPDGTTISCVLPVVGDLQDSKMGIQ 1597
            EPN+ S++ LI  F++      ++S   +M + G +PD   +   +     L   K   Q
Sbjct: 76   EPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQ 135

Query: 1596 IHGYVVKQGLEGDNCVVCALVDMYGKCGCPFEMKRVFYELARMDLGSCNALVSGLSRNGL 1417
            +HG     G + D+ V  +LV MY KC    +  RVF  +   D+ S +ALV+  +R G 
Sbjct: 136  VHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGC 195

Query: 1416 VDDALHTFMQFKDQEIELNVVSWTSIIACCTQNGKDIEALELFREMQLAGVKPNSVTIPC 1237
            VD+A   F +  D  ++ N++SW  +IA    +G   EA+ +F +M L G +P+  TI  
Sbjct: 196  VDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISS 255

Query: 1236 LLPACSNIAALMHGKAAHCYSLRRGFSHNVYVGSSLVDMYAKC----------------- 1108
            +LPA  ++  L+ G   H Y +++G   +  V S+L+DMY KC                 
Sbjct: 256  VLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMD 315

Query: 1107 --------------GKIVDSRNCFDRLPTK----NLVCWNAIMHGYAMHGLAREAIDIFE 982
                          G++  S   F +L  +    N+V W +++   + +G   EA+++F 
Sbjct: 316  VGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFR 375

Query: 981  LMQRSEQKPDFISLNCVLSAC--CQGGLTEKGRHYFNNMYQEHGIEARMEHYACMVTLLS 808
             MQ +  KP+ +++ C+L AC      +  K  H F+      GI   +   + ++ + +
Sbjct: 376  EMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFS---LRRGISTDVYVGSALIDMYA 432

Query: 807  RAGRLEEAYAMIKEMRSEPDACVWGALLSSCRVHGNVSLGEVAANQLFEL 658
            + GR++ +      + ++   C W A+++   +HG        A ++F+L
Sbjct: 433  KCGRIQASRICFDGIPTKNLVC-WNAVIAGYAMHGKAK----EAMEIFDL 477


>ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230-like
            [Glycine max]
          Length = 748

 Score =  815 bits (2105), Expect = 0.0
 Identities = 384/563 (68%), Positives = 463/563 (82%)
 Frame = -1

Query: 1824 VDKAKELFEEMTSFGVEPNLVSWNGLIAGFNQNGYLSESVSVLCRMHSEGFVPDGTTISC 1645
            V++AKELF EM S GVEPNLVSWNG++AGF  NG+  E+V +   M  +GF PDG+T+SC
Sbjct: 186  VEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSC 245

Query: 1644 VLPVVGDLQDSKMGIQIHGYVVKQGLEGDNCVVCALVDMYGKCGCPFEMKRVFYELARMD 1465
            VLP VG L+D  +G Q+HGYV+KQGL  D  VV A++DMYGKCGC  EM RVF E+  M+
Sbjct: 246  VLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEME 305

Query: 1464 LGSCNALVSGLSRNGLVDDALHTFMQFKDQEIELNVVSWTSIIACCTQNGKDIEALELFR 1285
            +GS NA ++GLSRNG+VD AL  F +FKDQ++ELNVV+WTSIIA C+QNGKD+EALELFR
Sbjct: 306  IGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFR 365

Query: 1284 EMQLAGVKPNSVTIPCLLPACSNIAALMHGKAAHCYSLRRGFSHNVYVGSSLVDMYAKCG 1105
            +MQ  GV+PN+VTIP L+PAC NI+ALMHGK  HC+SLRRG   +VYVGS+L+DMYAKCG
Sbjct: 366  DMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCG 425

Query: 1104 KIVDSRNCFDRLPTKNLVCWNAIMHGYAMHGLAREAIDIFELMQRSEQKPDFISLNCVLS 925
            +I  +R CFD++   NLV WNA+M GYAMHG A+E +++F +M +S QKPD ++  CVLS
Sbjct: 426  RIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLS 485

Query: 924  ACCQGGLTEKGRHYFNNMYQEHGIEARMEHYACMVTLLSRAGRLEEAYAMIKEMRSEPDA 745
            AC Q GLTE+G   +N+M +EHGIE +MEHYAC+VTLLSR G+LEEAY++IKEM  EPDA
Sbjct: 486  ACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDA 545

Query: 744  CVWGALLSSCRVHGNVSLGEVAANQLFELEPNNAGNYVLLSNIYAAKGMWKEVNRVRGVM 565
            CVWGALLSSCRVH N+SLGE+AA +LF LEP N GNY+LLSNIYA+KG+W E NR+R VM
Sbjct: 546  CVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVM 605

Query: 564  ENLGLRKNPGCSWIEVKNKVHTLLAGDRSHPNMAQIIEKLERLGMEMKKSGYRPDTNFVL 385
            ++ GLRKNPG SWIEV +KVH LLAGD+SHP M  I+EKL++L M+MKKSGY P TNFVL
Sbjct: 606  KSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSGYLPKTNFVL 665

Query: 384  QDVEEQDKENILCGHSEKLAVCLGLLSTPPGTCLRVIKNLRICGDCHTAIKFIARFEGRE 205
            QDVEEQDKE ILCGHSEKLAV LGLL+T PG  L+VIKNLRIC DCH  IK I+R EGRE
Sbjct: 666  QDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGRE 725

Query: 204  IYVRDTNRFHHFKDGLCSCGDYW 136
            IYVRDTNRFHHFKDG+CSCGD+W
Sbjct: 726  IYVRDTNRFHHFKDGVCSCGDFW 748



 Score =  150 bits (378), Expect = 1e-33
 Identities = 80/308 (25%), Positives = 156/308 (50%)
 Frame = -1

Query: 1773 PNLVSWNGLIAGFNQNGYLSESVSVLCRMHSEGFVPDGTTISCVLPVVGDLQDSKMGIQI 1594
            P L S++ LI  F ++ +    ++    +H    +PD   +   +     L+    G Q+
Sbjct: 67   PTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQL 126

Query: 1593 HGYVVKQGLEGDNCVVCALVDMYGKCGCPFEMKRVFYELARMDLGSCNALVSGLSRNGLV 1414
            H +    G   D+ V  +L  MY KC    + +++F  +   D+   +A+++G SR GLV
Sbjct: 127  HAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLV 186

Query: 1413 DDALHTFMQFKDQEIELNVVSWTSIIACCTQNGKDIEALELFREMQLAGVKPNSVTIPCL 1234
            ++A   F + +   +E N+VSW  ++A    NG   EA+ +FR M + G  P+  T+ C+
Sbjct: 187  EEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCV 246

Query: 1233 LPACSNIAALMHGKAAHCYSLRRGFSHNVYVGSSLVDMYAKCGKIVDSRNCFDRLPTKNL 1054
            LPA   +  ++ G   H Y +++G   + +V S+++DMY KCG + +    FD +    +
Sbjct: 247  LPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEI 306

Query: 1053 VCWNAIMHGYAMHGLAREAIDIFELMQRSEQKPDFISLNCVLSACCQGGLTEKGRHYFNN 874
               NA + G + +G+   A+++F   +  + + + ++   ++++C Q G   +    F +
Sbjct: 307  GSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRD 366

Query: 873  MYQEHGIE 850
            M Q +G+E
Sbjct: 367  M-QAYGVE 373


>ref|XP_002301973.1| predicted protein [Populus trichocarpa] gi|222843699|gb|EEE81246.1|
            predicted protein [Populus trichocarpa]
          Length = 716

 Score =  808 bits (2087), Expect = 0.0
 Identities = 391/563 (69%), Positives = 458/563 (81%)
 Frame = -1

Query: 1824 VDKAKELFEEMTSFGVEPNLVSWNGLIAGFNQNGYLSESVSVLCRMHSEGFVPDGTTISC 1645
            V + KELF +    GVE NLVSWNG+I+GFN++G   ++V +   MH EG  PDGT++S 
Sbjct: 156  VKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSS 215

Query: 1644 VLPVVGDLQDSKMGIQIHGYVVKQGLEGDNCVVCALVDMYGKCGCPFEMKRVFYELARMD 1465
            VLP VGDL    MGIQIH YV+KQGL  D  VV AL+DMYGKC C  EM  VF E+  +D
Sbjct: 216  VLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVD 275

Query: 1464 LGSCNALVSGLSRNGLVDDALHTFMQFKDQEIELNVVSWTSIIACCTQNGKDIEALELFR 1285
            +G+CNALV+GLSRNGLVD+AL  F QFK   ++LNVVSWTS+IA C+QNGKD+EALELFR
Sbjct: 276  VGACNALVTGLSRNGLVDNALEVFKQFKG--MDLNVVSWTSMIASCSQNGKDMEALELFR 333

Query: 1284 EMQLAGVKPNSVTIPCLLPACSNIAALMHGKAAHCYSLRRGFSHNVYVGSSLVDMYAKCG 1105
            EMQ+ GVKPNSVTIPCLLPAC NIAAL+HGKAAHC+SLR G  ++VYVGS+L+DMYAKCG
Sbjct: 334  EMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCG 393

Query: 1104 KIVDSRNCFDRLPTKNLVCWNAIMHGYAMHGLAREAIDIFELMQRSEQKPDFISLNCVLS 925
            +++ SR CFD +P +NLV WN++M GYAMHG   EAI+IFELMQR  QKPD +S  CVLS
Sbjct: 394  RMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLS 453

Query: 924  ACCQGGLTEKGRHYFNNMYQEHGIEARMEHYACMVTLLSRAGRLEEAYAMIKEMRSEPDA 745
            AC QGGLTE+G  YF++M + HG+EARMEHY+CMVTLL R+GRLEEAYAMIK+M  EPD+
Sbjct: 454  ACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDS 513

Query: 744  CVWGALLSSCRVHGNVSLGEVAANQLFELEPNNAGNYVLLSNIYAAKGMWKEVNRVRGVM 565
            CVWGALLSSCRVH  V LGE+AA ++FELEP N GNY+LLSNIYA+K MW EV+ VR +M
Sbjct: 514  CVWGALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMM 573

Query: 564  ENLGLRKNPGCSWIEVKNKVHTLLAGDRSHPNMAQIIEKLERLGMEMKKSGYRPDTNFVL 385
             + GL+KNPG SWIE+KNKVH LLAGD SHP M QIIEKL +L +EMKKSGY P T+FVL
Sbjct: 574  RSRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVL 633

Query: 384  QDVEEQDKENILCGHSEKLAVCLGLLSTPPGTCLRVIKNLRICGDCHTAIKFIARFEGRE 205
            QDVEEQDKE ILCGHSEKLAV LGLL+T PG  L+VIKNLRIC DCH  IKFI+ FE RE
Sbjct: 634  QDVEEQDKEQILCGHSEKLAVVLGLLNTKPGFPLQVIKNLRICRDCHAVIKFISDFEKRE 693

Query: 204  IYVRDTNRFHHFKDGLCSCGDYW 136
            I+VRDTNRFH FK G+CSCGDYW
Sbjct: 694  IFVRDTNRFHQFKGGVCSCGDYW 716



 Score =  143 bits (361), Expect = 1e-31
 Identities = 99/399 (24%), Positives = 190/399 (47%), Gaps = 4/399 (1%)
 Frame = -1

Query: 1737 FNQNGYLSESVSVLCRMHSEGFVPDGTTISCVLPVVGDLQDSKMGIQIHGYVVKQGLEGD 1558
            F++  +    + V   M ++G VPD   +  V+     L   + G Q+H + +  GL  D
Sbjct: 49   FSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLD 108

Query: 1557 NCVVCALVDMYGKCGCPFEMKRVFYELARMDLGSCNALVSGLSRNGLVDDALHTFMQFKD 1378
            + V+ +L+ MY +     + + VF +L +  + + +AL+S  +R G V +    F Q +D
Sbjct: 109  SVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRD 168

Query: 1377 QEIELNVVSWTSIIACCTQNGKDIEALELFREMQLAGVKPNSVTIPCLLPACSNIAALMH 1198
              +ELN+VSW  +I+   ++G  ++A+ +F+ M L G+KP+  ++  +LPA  ++   + 
Sbjct: 169  LGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLM 228

Query: 1197 GKAAHCYSLRRGFSHNVYVGSSLVDMYAKCGKIVDSRNCFDRLPTKNLVCWNAIMHGYAM 1018
            G   HCY +++G   + +V S+L+DMY KC    +    F+ +   ++   NA++ G + 
Sbjct: 229  GIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSR 288

Query: 1017 HGLAREAIDIFELMQRSEQKPDFISLNCVLSACCQGGLTEKGRHYFNNMYQEHGIEARME 838
            +GL   A+++F+  Q      + +S   ++++C Q G   +    F  M Q  G++    
Sbjct: 289  NGLVDNALEVFK--QFKGMDLNVVSWTSMIASCSQNGKDMEALELFREM-QIEGVKPNSV 345

Query: 837  HYACMVTLLSRAGRL---EEAYAMIKEMRSEPDACVWGALLSSCRVHGNVSLGEVAANQL 667
               C++        L   + A+          D  V  AL+      G +    +A+   
Sbjct: 346  TIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRM----LASRLC 401

Query: 666  FELEPN-NAGNYVLLSNIYAAKGMWKEVNRVRGVMENLG 553
            F++ PN N  ++  L   YA  G   E   +  +M+  G
Sbjct: 402  FDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCG 440


>emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
          Length = 760

 Score =  791 bits (2042), Expect = 0.0
 Identities = 377/512 (73%), Positives = 432/512 (84%)
 Frame = -1

Query: 1827 CVDKAKELFEEMTSFGVEPNLVSWNGLIAGFNQNGYLSESVSVLCRMHSEGFVPDGTTIS 1648
            CVD+AK LF EM   GV+PNL+SWNG+IAGFN +G  SE+V +   MH  GF PDGTTIS
Sbjct: 195  CVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTIS 254

Query: 1647 CVLPVVGDLQDSKMGIQIHGYVVKQGLEGDNCVVCALVDMYGKCGCPFEMKRVFYELARM 1468
             VLP VGDL+D  MGI IHGYV+KQGL  D CV  AL+DMYGKC C  EM +VF ++  M
Sbjct: 255  SVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHM 314

Query: 1467 DLGSCNALVSGLSRNGLVDDALHTFMQFKDQEIELNVVSWTSIIACCTQNGKDIEALELF 1288
            D+GSCNA + GLSRNG V+ +L  F Q KDQ +ELNVVSWTS+IACC+QNG+D+EALELF
Sbjct: 315  DVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELF 374

Query: 1287 REMQLAGVKPNSVTIPCLLPACSNIAALMHGKAAHCYSLRRGFSHNVYVGSSLVDMYAKC 1108
            REMQ+AGVKPNSVTIPCLLPAC NIAALMHGKAAHC+SLRRG S +VYVGS+L+DMYAKC
Sbjct: 375  REMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKC 434

Query: 1107 GKIVDSRNCFDRLPTKNLVCWNAIMHGYAMHGLAREAIDIFELMQRSEQKPDFISLNCVL 928
            G+I  SR CFD +PTKNLVCWNA++ GYAMHG A+EA++IF+LMQRS QKPD IS  CVL
Sbjct: 435  GRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVL 494

Query: 927  SACCQGGLTEKGRHYFNNMYQEHGIEARMEHYACMVTLLSRAGRLEEAYAMIKEMRSEPD 748
            SAC Q GLTE+G +YFN+M  ++GIEAR+EHYACMVTLLSRAG+LE+AYAMI+ M   PD
Sbjct: 495  SACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPD 554

Query: 747  ACVWGALLSSCRVHGNVSLGEVAANQLFELEPNNAGNYVLLSNIYAAKGMWKEVNRVRGV 568
            ACVWGALLSSCRVH NVSLGEVAA +LFELEP+N GNY+LLSNIYA+KGMW EVNRVR +
Sbjct: 555  ACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDM 614

Query: 567  MENLGLRKNPGCSWIEVKNKVHTLLAGDRSHPNMAQIIEKLERLGMEMKKSGYRPDTNFV 388
            M+N GLRKNPGCSWIEVKNKVH LLAGD+SHP M QIIE L++L MEMKK GY P+ NFV
Sbjct: 615  MKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEMKKLGYFPEINFV 674

Query: 387  LQDVEEQDKENILCGHSEKLAVCLGLLSTPPG 292
            LQDVEEQDKE ILCGHSEKLAV  GLL+TPPG
Sbjct: 675  LQDVEEQDKEQILCGHSEKLAVVFGLLNTPPG 706



 Score =  155 bits (392), Expect = 3e-35
 Identities = 106/410 (25%), Positives = 192/410 (46%), Gaps = 37/410 (9%)
 Frame = -1

Query: 1776 EPNLVSWNGLIAGFNQNGYLSESVSVLCRMHSEGFVPDGTTISCVLPVVGDLQDSKMGIQ 1597
            EPN+ S++ LI  F++      ++S   +M + G +PD   +   +     L   K   Q
Sbjct: 76   EPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQ 135

Query: 1596 IHGYVVKQGLEGDNCVVCALVDMYGKCGCPFEMKRVFYELARMDLGSCNALVSGLSRNGL 1417
            +HG     G + D+ V  +LV MY KC    +  RVF  +   D+ S +ALV+  +R G 
Sbjct: 136  VHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGC 195

Query: 1416 VDDALHTFMQFKDQEIELNVVSWTSIIACCTQNGKDIEALELFREMQLAGVKPNSVTIPC 1237
            VD+A   F +  D  ++ N++SW  +IA    +G   EA+ +F +M L G +P+  TI  
Sbjct: 196  VDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISS 255

Query: 1236 LLPACSNIAALMHGKAAHCYSLRRGFSHNVYVGSSLVDMYAKC----------------- 1108
            +LPA  ++  L+ G   H Y +++G   +  V S+L+DMY KC                 
Sbjct: 256  VLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMD 315

Query: 1107 --------------GKIVDSRNCFDRLPTK----NLVCWNAIMHGYAMHGLAREAIDIFE 982
                          G++  S   F +L  +    N+V W +++   + +G   EA+++F 
Sbjct: 316  VGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFR 375

Query: 981  LMQRSEQKPDFISLNCVLSAC--CQGGLTEKGRHYFNNMYQEHGIEARMEHYACMVTLLS 808
             MQ +  KP+ +++ C+L AC      +  K  H F+      GI   +   + ++ + +
Sbjct: 376  EMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFS---LRRGISTDVYVGSALIDMYA 432

Query: 807  RAGRLEEAYAMIKEMRSEPDACVWGALLSSCRVHGNVSLGEVAANQLFEL 658
            + GR++ +      + ++   C W A+++   +HG        A ++F+L
Sbjct: 433  KCGRIQASRICFDGIPTKNLVC-WNAVIAGYAMHGKAK----EAMEIFDL 477


>ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230-like
            [Brachypodium distachyon]
          Length = 661

 Score =  769 bits (1985), Expect = 0.0
 Identities = 362/557 (64%), Positives = 443/557 (79%)
 Frame = -1

Query: 1806 LFEEMTSFGVEPNLVSWNGLIAGFNQNGYLSESVSVLCRMHSEGFVPDGTTISCVLPVVG 1627
            L E+M S GVEPN+++WNGL++G N++G   ++V+ L RMHSEGF PD T +SC L  VG
Sbjct: 105  LLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVG 164

Query: 1626 DLQDSKMGIQIHGYVVKQGLEGDNCVVCALVDMYGKCGCPFEMKRVFYELARMDLGSCNA 1447
            D+++  +G Q+HGYVVK G   D CVV AL+DMYGKCG   E+ RVF+E + MD+ SCNA
Sbjct: 165  DVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNA 224

Query: 1446 LVSGLSRNGLVDDALHTFMQFKDQEIELNVVSWTSIIACCTQNGKDIEALELFREMQLAG 1267
            LV+GLSRN  V +AL  F +F  + +ELNVVSWTSI+ACC QNG+D+EA++LFR MQ  G
Sbjct: 225  LVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIG 284

Query: 1266 VKPNSVTIPCLLPACSNIAALMHGKAAHCYSLRRGFSHNVYVGSSLVDMYAKCGKIVDSR 1087
            V+PNSVTIPC+LPA +N+AALMHG++AHC+SLR+GF H+VYVGS+LVDMYAKCGK   +R
Sbjct: 285  VEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHAR 344

Query: 1086 NCFDRLPTKNLVCWNAIMHGYAMHGLAREAIDIFELMQRSEQKPDFISLNCVLSACCQGG 907
              FD +P++N+V WNA++ GYAMHG A  A+ +F  MQ+ +QKPD ++  CVL AC Q G
Sbjct: 345  TIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAG 404

Query: 906  LTEKGRHYFNNMYQEHGIEARMEHYACMVTLLSRAGRLEEAYAMIKEMRSEPDACVWGAL 727
            LTE+GR YFN M Q HGI  RMEHYACMVTLL R+G+L+EAY +I EM  EPD+C+WG+L
Sbjct: 405  LTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSL 464

Query: 726  LSSCRVHGNVSLGEVAANQLFELEPNNAGNYVLLSNIYAAKGMWKEVNRVRGVMENLGLR 547
            L SCRV+GNV L EVAA +LF+LEP NAGNYVLLSNIYA+K MW  VNRVR  M+N+GL+
Sbjct: 465  LGSCRVYGNVLLAEVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLK 524

Query: 546  KNPGCSWIEVKNKVHTLLAGDRSHPNMAQIIEKLERLGMEMKKSGYRPDTNFVLQDVEEQ 367
            K  GCSWIE+KNKVH LLAGD SHP M  I EKL +L +EM + G+ P  +FVL DVEEQ
Sbjct: 525  KEKGCSWIEIKNKVHMLLAGDNSHPMMTAITEKLNQLTIEMNRLGFAPSRDFVLHDVEEQ 584

Query: 366  DKENILCGHSEKLAVCLGLLSTPPGTCLRVIKNLRICGDCHTAIKFIARFEGREIYVRDT 187
            +K+NIL  HSEKLAV LGL+ST PGT LRVIKNLRICGDCH A+KFI+ FE REI VRDT
Sbjct: 585  EKDNILAVHSEKLAVALGLISTRPGTPLRVIKNLRICGDCHEAMKFISSFEQREISVRDT 644

Query: 186  NRFHHFKDGLCSCGDYW 136
            NRFHHFKDG CSCGDYW
Sbjct: 645  NRFHHFKDGKCSCGDYW 661



 Score =  103 bits (257), Expect = 2e-19
 Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 1/199 (0%)
 Frame = -1

Query: 1824 VDKAKELFEEMTSFGVEPNLVSWNGLIAGFNQNGYLSESVSVLCRMHSEGFVPDGTTISC 1645
            V +A  LF E    GVE N+VSW  ++A   QNG   E+V +   M S G  P+  TI C
Sbjct: 235  VSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPC 294

Query: 1644 VLPVVGDLQDSKMGIQIHGYVVKQGLEGDNCVVCALVDMYGKCGCPFEMKRVFYELARMD 1465
            VLP   ++     G   H + +++G   D  V  ALVDMY KCG     + +F  +   +
Sbjct: 295  VLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRN 354

Query: 1464 LGSCNALVSGLSRNGLVDDALHTFMQFKDQEIELNVVSWTSIIACCTQNGKDIEALELFR 1285
            + S NA++ G + +G   +A+  F   +  + + ++V++T ++  C+Q G   E    F 
Sbjct: 355  VVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFN 414

Query: 1284 EMQLA-GVKPNSVTIPCLL 1231
            EMQ   G+ P      C++
Sbjct: 415  EMQQGHGISPRMEHYACMV 433



 Score =  100 bits (249), Expect = 1e-18
 Identities = 76/338 (22%), Positives = 142/338 (42%), Gaps = 37/338 (10%)
 Frame = -1

Query: 1596 IHGYVVKQGLEGDNCVVCALVDMYGKCGCPFEMKRVFYELARMDLGSCNALVSGLSRNGL 1417
            +H   V  GL  D  V  +L+  Y + G     + VF  +   ++   +AL++G S  G 
Sbjct: 39   LHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGD 98

Query: 1416 VDDALHTFMQFKDQEIELNVVSWTSIIACCTQNGKDIEALELFREMQLAGVKPNSVTIPC 1237
             + A     Q +   +E NV++W  +++   ++G+ ++A+     M   G  P++  + C
Sbjct: 99   AEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSC 158

Query: 1236 LLPACSNIAALMHGKAAHCYSLRRGFSHNVYVGSSLVDMYAKCGKI------------VD 1093
             L A  ++  +  GK  H Y ++ G   +  V ++L+DMY KCG+             +D
Sbjct: 159  ALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMD 218

Query: 1092 SRNC-----------------------FDRLPTKNLVCWNAIMHGYAMHGLAREAIDIFE 982
              +C                         R    N+V W +I+     +G   EA+D+F 
Sbjct: 219  VASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFR 278

Query: 981  LMQRSEQKPDFISLNCVLSACCQGGLTEKGR--HYFNNMYQEHGIEARMEHYACMVTLLS 808
             MQ    +P+ +++ CVL A         GR  H F+      G    +   + +V + +
Sbjct: 279  TMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFS---LRKGFLHDVYVGSALVDMYA 335

Query: 807  RAGRLEEAYAMIKEMRSEPDACVWGALLSSCRVHGNVS 694
            + G+   A  +   M S  +   W A++    +HG+ +
Sbjct: 336  KCGKARHARTIFDAMPSR-NVVSWNAMIGGYAMHGDAA 372



 Score = 65.1 bits (157), Expect = 6e-08
 Identities = 40/135 (29%), Positives = 70/135 (51%)
 Frame = -1

Query: 1293 LFREMQLAGVKPNSVTIPCLLPACSNIAALMHGKAAHCYSLRRGFSHNVYVGSSLVDMYA 1114
            L+  ++     P+   +P  L +C    A    +A H  ++  G + + +V SSL+  Y 
Sbjct: 7    LYHFLRHVSFPPDPHLLPSALKSCP---AQPLARALHAAAVVSGLAEDPFVASSLLHSYI 63

Query: 1113 KCGKIVDSRNCFDRLPTKNLVCWNAIMHGYAMHGLAREAIDIFELMQRSEQKPDFISLNC 934
            + G    +R+ FDR+P KN+V W+A++ GY+  G A  A  + E M+ +  +P+ I+ N 
Sbjct: 64   RLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNG 123

Query: 933  VLSACCQGGLTEKGR 889
            ++S     GL   GR
Sbjct: 124  LVS-----GLNRSGR 133