BLASTX nr result

ID: Coptis25_contig00017740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017740
         (1201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520256.1| PREDICTED: uncharacterized protein LOC100780...   288   2e-75
ref|XP_002526813.1| conserved hypothetical protein [Ricinus comm...   278   2e-72
ref|XP_003634532.1| PREDICTED: uncharacterized protein LOC100252...   265   1e-68
emb|CBI18163.3| unnamed protein product [Vitis vinifera]              265   1e-68
ref|XP_003590256.1| Erythroid differentiation-related factor [Me...   254   4e-65

>ref|XP_003520256.1| PREDICTED: uncharacterized protein LOC100780584 [Glycine max]
          Length = 1462

 Score =  288 bits (737), Expect = 2e-75
 Identities = 150/225 (66%), Positives = 175/225 (77%), Gaps = 6/225 (2%)
 Frame = +3

Query: 531  CIGRLEIARPKPVGFLCGSIPVPTDKAFYHHNNNAFTXXXXXXXXXXXXXXNKLNAPRYR 710
            C+G LEIA PKPVGFLCGSIPVPTDK+F+H  ++A                  +NAPRYR
Sbjct: 24   CVGTLEIATPKPVGFLCGSIPVPTDKSFHHAFHSALLPTP-----------QTVNAPRYR 72

Query: 711  --VLPTETDLNTPPDLPH--QILLPINATTS--TTGDFHRESTAISQNFARKCEALAVSG 872
              +LPTETDLNTPP L +    +LP+ A  S  T GDF  E TA++ NF RKCEALAVSG
Sbjct: 73   YRMLPTETDLNTPPLLANFPDKVLPVGAVHSKATGGDFPWEGTAVASNFNRKCEALAVSG 132

Query: 873  LAEYGDEIDVVAPADILKQIFKMPYTKARLSIAVHRIGQTLVLNSGPDIEEGEKLVRRHS 1052
            LA+YGDEIDV+APADILKQIFKMPY+KARLSIAV RIG TLVLN+GPD+EEGEKL+RRH+
Sbjct: 133  LADYGDEIDVIAPADILKQIFKMPYSKARLSIAVRRIGHTLVLNTGPDVEEGEKLIRRHN 192

Query: 1053 SQSKSADPSLFLNFAMHSVRAEACDCPPSPYATPEEESNSTILPG 1187
            +QSK AD SLFLNFAMHSVR EACDCPP+ +   EE+SNS++LPG
Sbjct: 193  NQSKCADQSLFLNFAMHSVRMEACDCPPTHHVPSEEQSNSSVLPG 237


>ref|XP_002526813.1| conserved hypothetical protein [Ricinus communis]
            gi|223533817|gb|EEF35548.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1420

 Score =  278 bits (711), Expect = 2e-72
 Identities = 144/230 (62%), Positives = 169/230 (73%), Gaps = 3/230 (1%)
 Frame = +3

Query: 507  GGGELLECCIGRLEIARPKPVGFLCGSIPVPTDKAFYHHNNNAFTXXXXXXXXXXXXXXN 686
            GGGEL   C+GRLEI RPKPVGFLCGSIPVPTDK+F+  N+                   
Sbjct: 15   GGGELQ--CVGRLEIVRPKPVGFLCGSIPVPTDKSFHAFNSALIPSP------------R 60

Query: 687  KLNAPRYRVLPTETDLNTPP---DLPHQILLPINATTSTTGDFHRESTAISQNFARKCEA 857
             ++APRYR+LP ETDLNT P   +LP ++L         +G+   E  A+S N  RKCEA
Sbjct: 61   TVSAPRYRMLPAETDLNTLPVVANLPDKVLPFSAVQAKASGELPWEGDAVSSNLTRKCEA 120

Query: 858  LAVSGLAEYGDEIDVVAPADILKQIFKMPYTKARLSIAVHRIGQTLVLNSGPDIEEGEKL 1037
            LAVSGL EYGDEIDV+AP DILKQIFKMPY+KARLSIAV RIGQTL+LN+GPD+EEGEKL
Sbjct: 121  LAVSGLVEYGDEIDVIAPTDILKQIFKMPYSKARLSIAVRRIGQTLILNAGPDVEEGEKL 180

Query: 1038 VRRHSSQSKSADPSLFLNFAMHSVRAEACDCPPSPYATPEEESNSTILPG 1187
            VRRH +QSK AD SLFLNFAMHSVR EACDCPP+ +A+ E  S+S++ PG
Sbjct: 181  VRRHKTQSKCADQSLFLNFAMHSVRMEACDCPPTHHASSEGHSDSSVFPG 230


>ref|XP_003634532.1| PREDICTED: uncharacterized protein LOC100252053 [Vitis vinifera]
          Length = 1432

 Score =  265 bits (678), Expect = 1e-68
 Identities = 142/225 (63%), Positives = 167/225 (74%), Gaps = 4/225 (1%)
 Frame = +3

Query: 531  CIGRLEIARPKPVGFLCGSIPVPTDKAFYHHNNNAFTXXXXXXXXXXXXXXNKLNAPRYR 710
            C+GRLE+ RPKPVGFLCGSIPVPTDKAF H  N+A                  ++APRYR
Sbjct: 16   CVGRLEVVRPKPVGFLCGSIPVPTDKAF-HAVNSALIIPSSPT----------VSAPRYR 64

Query: 711  VLPTETDLNTPP---DLPHQILLPINATTSTTGDFHRESTAISQNFARKCEALAVSGLAE 881
            ++PTETDLN PP   DLP ++L      +S+ GD   ES A+  N   K EALAVSGL E
Sbjct: 65   MIPTETDLNMPPLQSDLPEKVLPLAAVQSSSAGDLPWESGAVKSNLTSKGEALAVSGLVE 124

Query: 882  YGDEIDVVAPADILKQIFKMPYTKARLSIAVHRIGQTLVLNSGPDIEEGEKLVRRHSSQS 1061
            YGD+IDV+AP DILKQIFKMPY+KA+LSIAVHRIGQTLVLN+GP IE+GEKLVRRH +QS
Sbjct: 125  YGDDIDVIAPVDILKQIFKMPYSKAQLSIAVHRIGQTLVLNTGPGIEDGEKLVRRH-NQS 183

Query: 1062 KSADPSLFLNFAMHSVRAEACDCPPSPYATPEEESNST-ILPGQY 1193
            K AD SLFLNFAMHSVR EACDCPP+  +  EE+ NS+ +LPG +
Sbjct: 184  KCADQSLFLNFAMHSVRMEACDCPPTHNSQSEEQPNSSEVLPGLF 228


>emb|CBI18163.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  265 bits (678), Expect = 1e-68
 Identities = 142/225 (63%), Positives = 167/225 (74%), Gaps = 4/225 (1%)
 Frame = +3

Query: 531  CIGRLEIARPKPVGFLCGSIPVPTDKAFYHHNNNAFTXXXXXXXXXXXXXXNKLNAPRYR 710
            C+GRLE+ RPKPVGFLCGSIPVPTDKAF H  N+A                  ++APRYR
Sbjct: 16   CVGRLEVVRPKPVGFLCGSIPVPTDKAF-HAVNSALIIPSSPT----------VSAPRYR 64

Query: 711  VLPTETDLNTPP---DLPHQILLPINATTSTTGDFHRESTAISQNFARKCEALAVSGLAE 881
            ++PTETDLN PP   DLP ++L      +S+ GD   ES A+  N   K EALAVSGL E
Sbjct: 65   MIPTETDLNMPPLQSDLPEKVLPLAAVQSSSAGDLPWESGAVKSNLTSKGEALAVSGLVE 124

Query: 882  YGDEIDVVAPADILKQIFKMPYTKARLSIAVHRIGQTLVLNSGPDIEEGEKLVRRHSSQS 1061
            YGD+IDV+AP DILKQIFKMPY+KA+LSIAVHRIGQTLVLN+GP IE+GEKLVRRH +QS
Sbjct: 125  YGDDIDVIAPVDILKQIFKMPYSKAQLSIAVHRIGQTLVLNTGPGIEDGEKLVRRH-NQS 183

Query: 1062 KSADPSLFLNFAMHSVRAEACDCPPSPYATPEEESNST-ILPGQY 1193
            K AD SLFLNFAMHSVR EACDCPP+  +  EE+ NS+ +LPG +
Sbjct: 184  KCADQSLFLNFAMHSVRMEACDCPPTHNSQSEEQPNSSEVLPGLF 228


>ref|XP_003590256.1| Erythroid differentiation-related factor [Medicago truncatula]
            gi|355479304|gb|AES60507.1| Erythroid
            differentiation-related factor [Medicago truncatula]
          Length = 1433

 Score =  254 bits (648), Expect = 4e-65
 Identities = 134/232 (57%), Positives = 162/232 (69%), Gaps = 2/232 (0%)
 Frame = +3

Query: 498  TKSGGGELLECCIGRLEIARPKPVGFLCGSIPVPTDKAFYHHNNNAFTXXXXXXXXXXXX 677
            +++ GGELL  C+G LEIA PKPVGFLCGSIPVPTD +F+                    
Sbjct: 11   SENSGGELL--CVGTLEIATPKPVGFLCGSIPVPTDNSFHS---------------ALLP 53

Query: 678  XXNKLNAPRYR--VLPTETDLNTPPDLPHQILLPINATTSTTGDFHRESTAISQNFARKC 851
                +NAPRYR  +LPT+TDLNTPP LP    +  N +    GDF  ESTA++ NFARKC
Sbjct: 54   TPQTVNAPRYRYRMLPTQTDLNTPPLLPVGSAVHSNTSAGGGGDFPWESTAVASNFARKC 113

Query: 852  EALAVSGLAEYGDEIDVVAPADILKQIFKMPYTKARLSIAVHRIGQTLVLNSGPDIEEGE 1031
            EALAVSG  +YGDEID++APADILKQIFKMPY+KARLSIAVHRIG TLVLN+GPDIEEGE
Sbjct: 114  EALAVSGFVDYGDEIDIIAPADILKQIFKMPYSKARLSIAVHRIGDTLVLNTGPDIEEGE 173

Query: 1032 KLVRRHSSQSKSADPSLFLNFAMHSVRAEACDCPPSPYATPEEESNSTILPG 1187
            KL+RRH++QSK              +R EACDCPP+ +   E++SNS++ PG
Sbjct: 174  KLIRRHNNQSK--------------LRMEACDCPPTHHVPSEDQSNSSVFPG 211


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