BLASTX nr result

ID: Coptis25_contig00017734 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017734
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315738.1| predicted protein [Populus trichocarpa] gi|2...   211   4e-53
ref|XP_002517028.1| conserved hypothetical protein [Ricinus comm...   206   1e-51
emb|CBI26352.3| unnamed protein product [Vitis vinifera]              197   7e-49
ref|XP_002280086.1| PREDICTED: ion channel CASTOR-like [Vitis vi...   197   7e-49
ref|XP_002311654.1| predicted protein [Populus trichocarpa] gi|2...   195   3e-48

>ref|XP_002315738.1| predicted protein [Populus trichocarpa] gi|222864778|gb|EEF01909.1|
           predicted protein [Populus trichocarpa]
          Length = 751

 Score =  211 bits (538), Expect = 4e-53
 Identities = 96/122 (78%), Positives = 114/122 (93%)
 Frame = -2

Query: 395 VSNSSTCELLKSISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFHLCGFPS 216
           VSN++TCELLKS+SG+KVEPVENVASKLFVQCSRQKGLIKIY+HLLNYRKNVF+LC FP 
Sbjct: 304 VSNTNTCELLKSVSGVKVEPVENVASKLFVQCSRQKGLIKIYKHLLNYRKNVFNLCSFPV 363

Query: 215 LAGLKYKTIRLGFKEAVVCGLYRSGKIYFHPNDEEVLEQTDKVLFIAPVDGKRNPQVVFS 36
           LAG+KY+ +R GF+E VVCGLYR+GKIYFHPND+E+L+QTDK+LFI PV GKRNPQ+ +S
Sbjct: 364 LAGIKYRQLRRGFQEVVVCGLYRNGKIYFHPNDDEILQQTDKILFIGPVHGKRNPQIAYS 423

Query: 35  NV 30
           +V
Sbjct: 424 SV 425


>ref|XP_002517028.1| conserved hypothetical protein [Ricinus communis]
           gi|223543663|gb|EEF45191.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 787

 Score =  206 bits (525), Expect = 1e-51
 Identities = 94/122 (77%), Positives = 113/122 (92%)
 Frame = -2

Query: 395 VSNSSTCELLKSISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFHLCGFPS 216
           VSNS+TC+LLKSISG+KVEPVENV SKLFVQCSRQKGLIKIYRHLLNYRKNVF+LC FP+
Sbjct: 294 VSNSNTCDLLKSISGVKVEPVENVVSKLFVQCSRQKGLIKIYRHLLNYRKNVFNLCSFPN 353

Query: 215 LAGLKYKTIRLGFKEAVVCGLYRSGKIYFHPNDEEVLEQTDKVLFIAPVDGKRNPQVVFS 36
           LAG+KY+ +R GF+E VVCGLYR+GKIYFHP+D+E+L+QTDKVLFI PV G+R P++ +S
Sbjct: 354 LAGIKYRKLRRGFQEVVVCGLYRNGKIYFHPSDDEILQQTDKVLFIGPVHGRRRPEIAYS 413

Query: 35  NV 30
           +V
Sbjct: 414 SV 415


>emb|CBI26352.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score =  197 bits (501), Expect = 7e-49
 Identities = 94/122 (77%), Positives = 108/122 (88%)
 Frame = -2

Query: 395 VSNSSTCELLKSISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFHLCGFPS 216
           V+NS T ELLKSISGLKVEPVENVASKL VQCSRQKGLIKIY+HLLNYRKNVF+L  FP+
Sbjct: 410 VTNSQTAELLKSISGLKVEPVENVASKLLVQCSRQKGLIKIYKHLLNYRKNVFNLFSFPN 469

Query: 215 LAGLKYKTIRLGFKEAVVCGLYRSGKIYFHPNDEEVLEQTDKVLFIAPVDGKRNPQVVFS 36
           LAG+KY+ +R GF+ AVVCGLYR+GKIYFHPND+EVL QTDKVLF+ PV GKR PQ+ + 
Sbjct: 470 LAGIKYRQLRRGFEGAVVCGLYRNGKIYFHPNDDEVLRQTDKVLFVGPVPGKREPQLAYP 529

Query: 35  NV 30
           +V
Sbjct: 530 DV 531


>ref|XP_002280086.1| PREDICTED: ion channel CASTOR-like [Vitis vinifera]
          Length = 729

 Score =  197 bits (501), Expect = 7e-49
 Identities = 94/122 (77%), Positives = 108/122 (88%)
 Frame = -2

Query: 395 VSNSSTCELLKSISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFHLCGFPS 216
           V+NS T ELLKSISGLKVEPVENVASKL VQCSRQKGLIKIY+HLLNYRKNVF+L  FP+
Sbjct: 293 VTNSQTAELLKSISGLKVEPVENVASKLLVQCSRQKGLIKIYKHLLNYRKNVFNLFSFPN 352

Query: 215 LAGLKYKTIRLGFKEAVVCGLYRSGKIYFHPNDEEVLEQTDKVLFIAPVDGKRNPQVVFS 36
           LAG+KY+ +R GF+ AVVCGLYR+GKIYFHPND+EVL QTDKVLF+ PV GKR PQ+ + 
Sbjct: 353 LAGIKYRQLRRGFEGAVVCGLYRNGKIYFHPNDDEVLRQTDKVLFVGPVPGKREPQLAYP 412

Query: 35  NV 30
           +V
Sbjct: 413 DV 414


>ref|XP_002311654.1| predicted protein [Populus trichocarpa] gi|222851474|gb|EEE89021.1|
           predicted protein [Populus trichocarpa]
          Length = 652

 Score =  195 bits (496), Expect = 3e-48
 Identities = 90/117 (76%), Positives = 107/117 (91%)
 Frame = -2

Query: 380 TCELLKSISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFHLCGFPSLAGLK 201
           TCELLKSISG+KVEPVENVASKLFVQCSRQKGLIKIYRHLLNY+KNVF+LC FP+LAG+K
Sbjct: 220 TCELLKSISGVKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYQKNVFNLCSFPALAGIK 279

Query: 200 YKTIRLGFKEAVVCGLYRSGKIYFHPNDEEVLEQTDKVLFIAPVDGKRNPQVVFSNV 30
           Y  +R GF+E VVCGLYR+GKI+FHPND+EV++Q DK+LFI PV GKR+ Q+ +S+V
Sbjct: 280 YWQLRRGFEEVVVCGLYRNGKIFFHPNDDEVVQQADKILFIGPVHGKRSSQIAYSSV 336


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