BLASTX nr result

ID: Coptis25_contig00017701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017701
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24131.3| unnamed protein product [Vitis vinifera]              133   2e-29
ref|XP_002265699.1| PREDICTED: general transcription factor 3C p...   133   2e-29
ref|XP_003540640.1| PREDICTED: general transcription factor 3C p...   130   9e-29
ref|XP_003538968.1| PREDICTED: general transcription factor 3C p...   130   1e-28
ref|XP_003607543.1| Transcription factor tau subunit sfc4 [Medic...   129   2e-28

>emb|CBI24131.3| unnamed protein product [Vitis vinifera]
          Length = 915

 Score =  133 bits (334), Expect = 2e-29
 Identities = 60/87 (68%), Positives = 75/87 (86%)
 Frame = +3

Query: 3    EALYNIARAYQHVGLVTLAASYYEKVIATQVKGYPIPKMPIEDSSLPQSHSQGYCNLRRE 182
            EALYNIARAY HVGLV+LA +YYEKV+AT  + YPIP++P E++ L ++   GYC+LRRE
Sbjct: 828  EALYNIARAYHHVGLVSLAVTYYEKVLATHERDYPIPRLPYENTDLVENRKPGYCDLRRE 887

Query: 183  AVYNLHLIYRKSGALDLARQVLRNHCS 263
            A YNLHLIY+KSGALDLARQVL++HC+
Sbjct: 888  AAYNLHLIYKKSGALDLARQVLKDHCT 914


>ref|XP_002265699.1| PREDICTED: general transcription factor 3C polypeptide 3-like [Vitis
            vinifera]
          Length = 1110

 Score =  133 bits (334), Expect = 2e-29
 Identities = 60/87 (68%), Positives = 75/87 (86%)
 Frame = +3

Query: 3    EALYNIARAYQHVGLVTLAASYYEKVIATQVKGYPIPKMPIEDSSLPQSHSQGYCNLRRE 182
            EALYNIARAY HVGLV+LA +YYEKV+AT  + YPIP++P E++ L ++   GYC+LRRE
Sbjct: 1023 EALYNIARAYHHVGLVSLAVTYYEKVLATHERDYPIPRLPYENTDLVENRKPGYCDLRRE 1082

Query: 183  AVYNLHLIYRKSGALDLARQVLRNHCS 263
            A YNLHLIY+KSGALDLARQVL++HC+
Sbjct: 1083 AAYNLHLIYKKSGALDLARQVLKDHCT 1109


>ref|XP_003540640.1| PREDICTED: general transcription factor 3C polypeptide 3-like
            [Glycine max]
          Length = 919

 Score =  130 bits (328), Expect = 9e-29
 Identities = 62/87 (71%), Positives = 73/87 (83%)
 Frame = +3

Query: 3    EALYNIARAYQHVGLVTLAASYYEKVIATQVKGYPIPKMPIEDSSLPQSHSQGYCNLRRE 182
            E+LYNIARA+ HVGLVTLAA YYEKVIA   K YPIPK+P E+    ++H  GYC+LRRE
Sbjct: 832  ESLYNIARAFHHVGLVTLAAFYYEKVIAICEKDYPIPKLPNENPDSIETHKPGYCDLRRE 891

Query: 183  AVYNLHLIYRKSGALDLARQVLRNHCS 263
            A YNLHLIY+KSGALDLARQVL++HC+
Sbjct: 892  AAYNLHLIYKKSGALDLARQVLKDHCT 918


>ref|XP_003538968.1| PREDICTED: general transcription factor 3C polypeptide 3-like
            [Glycine max]
          Length = 929

 Score =  130 bits (327), Expect = 1e-28
 Identities = 61/87 (70%), Positives = 74/87 (85%)
 Frame = +3

Query: 3    EALYNIARAYQHVGLVTLAASYYEKVIATQVKGYPIPKMPIEDSSLPQSHSQGYCNLRRE 182
            E+LYNIARA+ HVGLVTLA  YYEKVIA   + YPIPK+P E+S + ++H  GYC+LRRE
Sbjct: 842  ESLYNIARAFHHVGLVTLAVIYYEKVIAMCERDYPIPKLPNENSDIIETHKPGYCDLRRE 901

Query: 183  AVYNLHLIYRKSGALDLARQVLRNHCS 263
            A YNLHLIY+KSGALDLARQVLR++C+
Sbjct: 902  AAYNLHLIYKKSGALDLARQVLRDYCT 928


>ref|XP_003607543.1| Transcription factor tau subunit sfc4 [Medicago truncatula]
            gi|355508598|gb|AES89740.1| Transcription factor tau
            subunit sfc4 [Medicago truncatula]
          Length = 937

 Score =  129 bits (325), Expect = 2e-28
 Identities = 61/87 (70%), Positives = 73/87 (83%)
 Frame = +3

Query: 3    EALYNIARAYQHVGLVTLAASYYEKVIATQVKGYPIPKMPIEDSSLPQSHSQGYCNLRRE 182
            E+LYNIARAY HVGLVTLAA YYEKVIA + + YPIPK+  E   + ++H  GYCNLRRE
Sbjct: 850  ESLYNIARAYHHVGLVTLAAIYYEKVIAIRERDYPIPKLQNESIDVIENHKPGYCNLRRE 909

Query: 183  AVYNLHLIYRKSGALDLARQVLRNHCS 263
            A YNLHLIY++SGALDLARQVL+++CS
Sbjct: 910  AAYNLHLIYKRSGALDLARQVLKDYCS 936


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