BLASTX nr result

ID: Coptis25_contig00017676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017676
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140791.1| PREDICTED: putative dihydrodipicolinate redu...    69   7e-15
ref|XP_004173790.1| PREDICTED: putative dihydrodipicolinate redu...    69   7e-15
ref|XP_002322434.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-13
emb|CBI31836.3| unnamed protein product [Vitis vinifera]               73   3e-12
ref|XP_002274702.1| PREDICTED: putative dihydrodipicolinate redu...    73   3e-12

>ref|XP_004140791.1| PREDICTED: putative dihydrodipicolinate reductase 3,
           chloroplastic-like [Cucumis sativus]
          Length = 300

 Score = 68.9 bits (167), Expect(2) = 7e-15
 Identities = 30/40 (75%), Positives = 38/40 (95%)
 Frame = +3

Query: 207 VVINGATKDIGKAAILAITKARGMEIAGAVDSHLVGQDIG 326
           V+INGA K+IG+AA++A+TKARGME+AGAVDSH VG+DIG
Sbjct: 38  VIINGAAKEIGRAAVIAVTKARGMEVAGAVDSHCVGEDIG 77



 Score = 36.2 bits (82), Expect(2) = 7e-15
 Identities = 18/36 (50%), Positives = 21/36 (58%)
 Frame = +2

Query: 17  MAALNSSFQLTEYKRTHKRLVTSPIICSVQTSQNNI 124
           MA L   F  T YK + K+   S I+CSVQ SQ NI
Sbjct: 1   MATLGCQFPFTVYKNSKKKRPGSSILCSVQPSQGNI 36


>ref|XP_004173790.1| PREDICTED: putative dihydrodipicolinate reductase 3,
           chloroplastic-like [Cucumis sativus]
          Length = 189

 Score = 68.9 bits (167), Expect(2) = 7e-15
 Identities = 30/40 (75%), Positives = 38/40 (95%)
 Frame = +3

Query: 207 VVINGATKDIGKAAILAITKARGMEIAGAVDSHLVGQDIG 326
           V+INGA K+IG+AA++A+TKARGME+AGAVDSH VG+DIG
Sbjct: 38  VIINGAAKEIGRAAVIAVTKARGMEVAGAVDSHCVGEDIG 77



 Score = 36.2 bits (82), Expect(2) = 7e-15
 Identities = 18/36 (50%), Positives = 21/36 (58%)
 Frame = +2

Query: 17  MAALNSSFQLTEYKRTHKRLVTSPIICSVQTSQNNI 124
           MA L   F  T YK + K+   S I+CSVQ SQ NI
Sbjct: 1   MATLGCQFPFTVYKNSKKKRPGSSILCSVQPSQGNI 36


>ref|XP_002322434.1| predicted protein [Populus trichocarpa] gi|222869430|gb|EEF06561.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score = 69.7 bits (169), Expect(2) = 1e-13
 Identities = 31/40 (77%), Positives = 38/40 (95%)
 Frame = +3

Query: 207 VVINGATKDIGKAAILAITKARGMEIAGAVDSHLVGQDIG 326
           VVINGA K+IG+AA++A+TKARGME+AGAVDSH VG+DIG
Sbjct: 38  VVINGAAKEIGRAAVIAVTKARGMEVAGAVDSHFVGEDIG 77



 Score = 31.2 bits (69), Expect(2) = 1e-13
 Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = +2

Query: 17  MAALNSSFQLTEYKRTHKRLVTSPII-CSVQTSQNNI 124
           MAAL+  F  T +K   K ++T P I CS+Q SQ+NI
Sbjct: 1   MAALSCHFHFTVHK-VSKNVITRPFISCSMQPSQSNI 36


>emb|CBI31836.3| unnamed protein product [Vitis vinifera]
          Length = 303

 Score = 72.8 bits (177), Expect(2) = 3e-12
 Identities = 33/41 (80%), Positives = 40/41 (97%)
 Frame = +3

Query: 207 VVINGATKDIGKAAILAITKARGMEIAGAVDSHLVGQDIGM 329
           VVINGA K+IG+AA++A+TKARGME+AGAVDSHLVG+DIGM
Sbjct: 40  VVINGAAKEIGRAAVVAVTKARGMEVAGAVDSHLVGEDIGM 80



 Score = 23.5 bits (49), Expect(2) = 3e-12
 Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
 Frame = +2

Query: 20  AALNSSFQLTEYKRTHKRLVTSPII-CSV-QTSQNNI 124
           AAL+S F  T Y R+ K + T  ++ CS+ Q SQ+NI
Sbjct: 3   AALSSQFHPTTY-RSIKNVKTKQLVSCSMQQPSQSNI 38


>ref|XP_002274702.1| PREDICTED: putative dihydrodipicolinate reductase 3, chloroplastic
           [Vitis vinifera] gi|147816661|emb|CAN68386.1|
           hypothetical protein VITISV_012454 [Vitis vinifera]
          Length = 302

 Score = 72.8 bits (177), Expect(2) = 3e-12
 Identities = 33/41 (80%), Positives = 40/41 (97%)
 Frame = +3

Query: 207 VVINGATKDIGKAAILAITKARGMEIAGAVDSHLVGQDIGM 329
           VVINGA K+IG+AA++A+TKARGME+AGAVDSHLVG+DIGM
Sbjct: 40  VVINGAAKEIGRAAVVAVTKARGMEVAGAVDSHLVGEDIGM 80



 Score = 23.5 bits (49), Expect(2) = 3e-12
 Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
 Frame = +2

Query: 20  AALNSSFQLTEYKRTHKRLVTSPII-CSV-QTSQNNI 124
           AAL+S F  T Y R+ K + T  ++ CS+ Q SQ+NI
Sbjct: 3   AALSSQFHPTTY-RSIKNVKTKQLVSCSMQQPSQSNI 38


Top