BLASTX nr result

ID: Coptis25_contig00017666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017666
         (1400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269195.1| PREDICTED: uncharacterized protein LOC100265...   318   e-102
ref|XP_002519376.1| conserved hypothetical protein [Ricinus comm...   306   1e-98
ref|XP_003529690.1| PREDICTED: uncharacterized protein LOC100804...   307   8e-96
gb|ABK96167.1| unknown [Populus trichocarpa]                          296   2e-95
ref|NP_178346.2| uncharacterized protein [Arabidopsis thaliana] ...   303   3e-94

>ref|XP_002269195.1| PREDICTED: uncharacterized protein LOC100265963 [Vitis vinifera]
           gi|297739435|emb|CBI29617.3| unnamed protein product
           [Vitis vinifera]
          Length = 282

 Score =  318 bits (816), Expect(2) = e-102
 Identities = 155/185 (83%), Positives = 169/185 (91%)
 Frame = -1

Query: 830 SFYSTSQGIETAVPVLLVDGYNVCGYWTKLKKHFMNGRLDIARQKLIDELITFSTLREVK 651
           + Y T+QGI+TAVPVLLVDGYNVCGYW KLKKHF+NGRLDIARQKLIDEL+TFS LREVK
Sbjct: 93  TLYYTNQGIDTAVPVLLVDGYNVCGYWMKLKKHFVNGRLDIARQKLIDELVTFSLLREVK 152

Query: 650 VVVVFDALMSRFPTHKEDFAGIDVVFSSESCADAWIEKEVVALKEDGCPKVWVVTSDRCQ 471
           VVVVFDA+MS  PTHKE+FAGIDVV+S ESCADAWIEKEVVAL+EDGCPKVWVVTSD CQ
Sbjct: 153 VVVVFDAMMSGLPTHKENFAGIDVVYSGESCADAWIEKEVVALREDGCPKVWVVTSDNCQ 212

Query: 470 QQAAHGAGAFIWSSKALVTEIKASQKEFEKMLHEHRSNSVQGKLLKHNLDSGVVDALKDL 291
           QQAAHGAGAF+WS KALV+EIKAS KE E+ML E RS S+QGKLLKHNLD+ VVDALKDL
Sbjct: 213 QQAAHGAGAFVWSCKALVSEIKASHKEVERMLQEQRSTSMQGKLLKHNLDAEVVDALKDL 272

Query: 290 RSKLS 276
           R KLS
Sbjct: 273 RKKLS 277



 Score = 81.6 bits (200), Expect(2) = e-102
 Identities = 46/82 (56%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
 Frame = -2

Query: 1180 KFMARRKKSC---TPSKDSDLGARRITSNVKQNLQFLKLWREFHXXXXXXXXXXXSYRKK 1010
            K +AR KKS    +P K S+    RIT+NVKQNLQFLKLW+EF            SYR+K
Sbjct: 14   KIVARSKKSSQQPSPYKGSESTPPRITTNVKQNLQFLKLWKEFQKRKSSTPKPATSYRRK 73

Query: 1009 KGQKEEQLEDTELYLDPTVTLY 944
            K QK++  EDTELY DPTVTLY
Sbjct: 74   KVQKDDLPEDTELYHDPTVTLY 95


>ref|XP_002519376.1| conserved hypothetical protein [Ricinus communis]
           gi|223541443|gb|EEF42993.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 303

 Score =  306 bits (784), Expect(2) = 1e-98
 Identities = 153/185 (82%), Positives = 162/185 (87%)
 Frame = -1

Query: 830 SFYSTSQGIETAVPVLLVDGYNVCGYWTKLKKHFMNGRLDIARQKLIDELITFSTLREVK 651
           S Y T+Q I+ AVPVLLVDGYNVCGYW KLKKHFMNGRLDIARQKLIDELITFS LREVK
Sbjct: 112 SLYYTNQVIDDAVPVLLVDGYNVCGYWPKLKKHFMNGRLDIARQKLIDELITFSMLREVK 171

Query: 650 VVVVFDALMSRFPTHKEDFAGIDVVFSSESCADAWIEKEVVALKEDGCPKVWVVTSDRCQ 471
           VV VFDA+MS  PTHKE F GIDVVFS ESCADAWIEKEVVAL+EDGCPKVWVVTSDR Q
Sbjct: 172 VVAVFDAMMSGLPTHKETFIGIDVVFSGESCADAWIEKEVVALREDGCPKVWVVTSDRMQ 231

Query: 470 QQAAHGAGAFIWSSKALVTEIKASQKEFEKMLHEHRSNSVQGKLLKHNLDSGVVDALKDL 291
           Q AAHGAGAF+WSSKALV+EIKAS KE E ML E R  S QG+LLKHNLDS VVDALKDL
Sbjct: 232 QHAAHGAGAFVWSSKALVSEIKASHKEVEMMLQEQRPTSFQGRLLKHNLDSEVVDALKDL 291

Query: 290 RSKLS 276
           R+KL+
Sbjct: 292 RNKLA 296



 Score = 81.6 bits (200), Expect(2) = 1e-98
 Identities = 46/88 (52%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
 Frame = -2

Query: 1204 RSCYCAFPKFMARRKKSCTPS-KDSDLGARRITSNVKQNLQFLKLWREFHXXXXXXXXXX 1028
            R+ Y      M + KK  +PS KD +    RITSN+KQNLQFLKLW+EF           
Sbjct: 27   RNTYYKIVIVMGKNKKPRSPSPKDPEPAPPRITSNLKQNLQFLKLWKEFQKRKSSTPKPA 86

Query: 1027 XSYRKKKGQKEEQLEDTELYLDPTVTLY 944
             SYRKKK QKE+  EDTELY DPT++LY
Sbjct: 87   TSYRKKKVQKEDLPEDTELYRDPTLSLY 114


>ref|XP_003529690.1| PREDICTED: uncharacterized protein LOC100804585 [Glycine max]
          Length = 286

 Score =  307 bits (786), Expect(2) = 8e-96
 Identities = 149/185 (80%), Positives = 163/185 (88%), Gaps = 1/185 (0%)
 Frame = -1

Query: 827 FYSTSQGI-ETAVPVLLVDGYNVCGYWTKLKKHFMNGRLDIARQKLIDELITFSTLREVK 651
           +Y+  QGI + AVPVLLVDGYNVCGYW KLKKHF+ GRLDIARQKLIDEL+TFS LREVK
Sbjct: 97  YYTNQQGILDNAVPVLLVDGYNVCGYWMKLKKHFVKGRLDIARQKLIDELLTFSMLREVK 156

Query: 650 VVVVFDALMSRFPTHKEDFAGIDVVFSSESCADAWIEKEVVALKEDGCPKVWVVTSDRCQ 471
           +VVVFDA+MS  PTHKEDFAG+D++FS E+CAD WIEKEV ALKEDGCPKVWVVTSD C 
Sbjct: 157 IVVVFDAMMSGLPTHKEDFAGLDIIFSGETCADTWIEKEVAALKEDGCPKVWVVTSDHCH 216

Query: 470 QQAAHGAGAFIWSSKALVTEIKASQKEFEKMLHEHRSNSVQGKLLKHNLDSGVVDALKDL 291
           QQAAHGAGAFIWS KALVTEIKASQKE E+ML E RS S QG+LLKHNLD+ VVDALKDL
Sbjct: 217 QQAAHGAGAFIWSCKALVTEIKASQKEVERMLQEQRSTSFQGRLLKHNLDAEVVDALKDL 276

Query: 290 RSKLS 276
           R KLS
Sbjct: 277 RQKLS 281



 Score = 71.6 bits (174), Expect(2) = 8e-96
 Identities = 38/77 (49%), Positives = 50/77 (64%)
 Frame = -2

Query: 1174 MARRKKSCTPSKDSDLGARRITSNVKQNLQFLKLWREFHXXXXXXXXXXXSYRKKKGQKE 995
            M R+K++    +DS+    RITSNVKQNL+FLKLW+ F            SYRKKK +KE
Sbjct: 25   MVRKKQT----QDSESTPPRITSNVKQNLRFLKLWKSFQNRNSSTPRPSTSYRKKKVEKE 80

Query: 994  EQLEDTELYLDPTVTLY 944
            + + DT+LY DPT +LY
Sbjct: 81   DDVVDTDLYRDPTTSLY 97


>gb|ABK96167.1| unknown [Populus trichocarpa]
          Length = 297

 Score =  296 bits (758), Expect(2) = 2e-95
 Identities = 144/185 (77%), Positives = 160/185 (86%)
 Frame = -1

Query: 830 SFYSTSQGIETAVPVLLVDGYNVCGYWTKLKKHFMNGRLDIARQKLIDELITFSTLREVK 651
           S Y T+Q +ET VPVLLVDGYNVCGYW KLKKHF+NGRLDIARQKLIDEL+ FS  R+VK
Sbjct: 106 SLYYTNQIVETGVPVLLVDGYNVCGYWAKLKKHFVNGRLDIARQKLIDELVAFSLARDVK 165

Query: 650 VVVVFDALMSRFPTHKEDFAGIDVVFSSESCADAWIEKEVVALKEDGCPKVWVVTSDRCQ 471
           VVVVFDA+MS  PTHKE+FAG+DV+F+ ESCADAWIEKEVVALKEDGCPKVWVVTSD   
Sbjct: 166 VVVVFDAMMSGLPTHKENFAGVDVIFTGESCADAWIEKEVVALKEDGCPKVWVVTSDHIH 225

Query: 470 QQAAHGAGAFIWSSKALVTEIKASQKEFEKMLHEHRSNSVQGKLLKHNLDSGVVDALKDL 291
           Q AAHGAGAFIWS KALV+E+KASQ+E E+ L E R  S QG+LLKHNLDS VVDALKDL
Sbjct: 226 QHAAHGAGAFIWSCKALVSEVKASQQEVERALQELRPTSFQGRLLKHNLDSEVVDALKDL 285

Query: 290 RSKLS 276
           R KL+
Sbjct: 286 RKKLA 290



 Score = 80.9 bits (198), Expect(2) = 2e-95
 Identities = 44/80 (55%), Positives = 54/80 (67%), Gaps = 3/80 (3%)
 Frame = -2

Query: 1174 MARRKKS---CTPSKDSDLGARRITSNVKQNLQFLKLWREFHXXXXXXXXXXXSYRKKKG 1004
            MA+ KKS    +P+K S+    RITSNVKQNLQFLKLW+EF            SYR+KK 
Sbjct: 29   MAKSKKSQPASSPNKGSESAPPRITSNVKQNLQFLKLWKEFQKRKSSTPKPSTSYRRKKV 88

Query: 1003 QKEEQLEDTELYLDPTVTLY 944
            +KE+  EDTELY DPT++LY
Sbjct: 89   EKEDLPEDTELYRDPTLSLY 108


>ref|NP_178346.2| uncharacterized protein [Arabidopsis thaliana]
           gi|26449562|dbj|BAC41907.1| unknown protein [Arabidopsis
           thaliana] gi|28950879|gb|AAO63363.1| At2g02410
           [Arabidopsis thaliana] gi|330250483|gb|AEC05577.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 308

 Score =  303 bits (776), Expect(2) = 3e-94
 Identities = 147/186 (79%), Positives = 166/186 (89%), Gaps = 1/186 (0%)
 Frame = -1

Query: 830 SFYSTSQGI-ETAVPVLLVDGYNVCGYWTKLKKHFMNGRLDIARQKLIDELITFSTLREV 654
           + Y T+QG+ + AVPVLLVDGYNVCGYW KLKKHFM GRLD+ARQKL+DEL++FS ++EV
Sbjct: 117 TLYYTNQGLLDDAVPVLLVDGYNVCGYWMKLKKHFMKGRLDVARQKLVDELVSFSMVKEV 176

Query: 653 KVVVVFDALMSRFPTHKEDFAGIDVVFSSESCADAWIEKEVVALKEDGCPKVWVVTSDRC 474
           KVVVVFDALMS  PTHKEDFAG+DV+FS E+CADAWIEKEVVAL+EDGCPKVWVVTSD C
Sbjct: 177 KVVVVFDALMSGLPTHKEDFAGVDVIFSGETCADAWIEKEVVALREDGCPKVWVVTSDVC 236

Query: 473 QQQAAHGAGAFIWSSKALVTEIKASQKEFEKMLHEHRSNSVQGKLLKHNLDSGVVDALKD 294
           QQQAAHGAGA+IWSSKALV+EIK+  KE EKM+ E RS S QG+LLKHNLDS VVDALKD
Sbjct: 237 QQQAAHGAGAYIWSSKALVSEIKSMHKEVEKMMQETRSTSFQGRLLKHNLDSEVVDALKD 296

Query: 293 LRSKLS 276
           LR KLS
Sbjct: 297 LRDKLS 302



 Score = 70.1 bits (170), Expect(2) = 3e-94
 Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
 Frame = -2

Query: 1243 SWSGMSILFPLPYRSCYCAFPKFMARRKKSCTPS--KDSDLGARRITSNVKQNLQFLKLW 1070
            +WS  S      Y SC     K   + KK    S  K+S+    RI SNVK NLQ LKLW
Sbjct: 22   NWSSSSC----SYDSCRVLVVKMGGKSKKPHQSSSFKESEPEPPRIKSNVKHNLQLLKLW 77

Query: 1069 REFHXXXXXXXXXXXSYRKKKGQKEEQLEDTELYLDPTVTLY 944
            +EF            SYRKKK +K+E  +D+ELY DPT TLY
Sbjct: 78   KEFQSRGSGMAKPATSYRKKKVEKDELPDDSELYRDPTNTLY 119


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