BLASTX nr result

ID: Coptis25_contig00017648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017648
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279154.2| PREDICTED: uncharacterized protein LOC100261...    63   2e-08
emb|CBI26292.3| unnamed protein product [Vitis vinifera]               63   2e-08
ref|XP_002311635.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_002315756.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
dbj|BAG50072.1| transcription factor CPP [Lotus japonicus]             58   7e-07

>ref|XP_002279154.2| PREDICTED: uncharacterized protein LOC100261336 [Vitis vinifera]
          Length = 738

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/41 (75%), Positives = 34/41 (82%), Gaps = 1/41 (2%)
 Frame = +3

Query: 3   SPNRKRVSPPHSEFTSSPGRRNTRKLVLQSIPSFPSLN-QH 122
           SPN KRVSPPH +F SSP RR+ RKL+LQSIPSFPSL  QH
Sbjct: 698 SPNSKRVSPPHCDFGSSPSRRSGRKLILQSIPSFPSLTPQH 738


>emb|CBI26292.3| unnamed protein product [Vitis vinifera]
          Length = 717

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/41 (75%), Positives = 34/41 (82%), Gaps = 1/41 (2%)
 Frame = +3

Query: 3   SPNRKRVSPPHSEFTSSPGRRNTRKLVLQSIPSFPSLN-QH 122
           SPN KRVSPPH +F SSP RR+ RKL+LQSIPSFPSL  QH
Sbjct: 677 SPNSKRVSPPHCDFGSSPSRRSGRKLILQSIPSFPSLTPQH 717


>ref|XP_002311635.1| predicted protein [Populus trichocarpa] gi|222851455|gb|EEE89002.1|
           predicted protein [Populus trichocarpa]
          Length = 749

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/41 (75%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
 Frame = +3

Query: 3   SPNRKRVSPPHSEFTSSPGRRNTRKLVLQSIPSFPSLN-QH 122
           SPN KRVSPP S   SSPGRR+ RKL+LQSIPSFPSL  QH
Sbjct: 709 SPNSKRVSPPQSNLGSSPGRRSGRKLILQSIPSFPSLTPQH 749


>ref|XP_002315756.1| predicted protein [Populus trichocarpa] gi|222864796|gb|EEF01927.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/41 (73%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
 Frame = +3

Query: 3   SPNRKRVSPPHSEFTSSPGRRNTRKLVLQSIPSFPSLN-QH 122
           SPN KRVSPP + F SSPG R+ RKL+LQSIPSFPSL  QH
Sbjct: 121 SPNSKRVSPPQNNFGSSPGPRSGRKLILQSIPSFPSLTPQH 161


>dbj|BAG50072.1| transcription factor CPP [Lotus japonicus]
          Length = 764

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/40 (67%), Positives = 30/40 (75%)
 Frame = +3

Query: 3   SPNRKRVSPPHSEFTSSPGRRNTRKLVLQSIPSFPSLNQH 122
           SPN KR+S P+ E  SSP RR  RKL+LQSIPSFPSL  H
Sbjct: 724 SPNSKRISSPNCEMRSSPSRRGGRKLILQSIPSFPSLTTH 763


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