BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017623
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containi...   153   1e-35
ref|XP_002306730.1| predicted protein [Populus trichocarpa] gi|2...   151   5e-35
ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   144   6e-33
ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containi...   144   6e-33
ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat...   142   3e-32

>ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g34160-like [Vitis vinifera]
          Length = 573

 Score =  153 bits (387), Expect = 1e-35
 Identities = 71/92 (77%), Positives = 80/92 (86%)
 Frame = +1

Query: 1   YVPETCYVLHDIGEEEKEIALCHHSEKLAIAFGLINTGAGTSIQVIKNLMICGDCYAVFK 180
           YV ET  VLHDIGEE+KE ALCHHSEKLA+AFGLI+T  GT I+V KNL ICGDC+ V K
Sbjct: 482 YVAETSLVLHDIGEEDKENALCHHSEKLAVAFGLISTSEGTPIRVNKNLRICGDCHVVIK 541

Query: 181 LISKIYEREIIVRDRSRFHRFKEGSCSCGDYW 276
           LISKIY++EIIVRDR+RFHRFK+GSCSC DYW
Sbjct: 542 LISKIYDQEIIVRDRARFHRFKDGSCSCRDYW 573


>ref|XP_002306730.1| predicted protein [Populus trichocarpa] gi|222856179|gb|EEE93726.1|
           predicted protein [Populus trichocarpa]
          Length = 578

 Score =  151 bits (382), Expect = 5e-35
 Identities = 72/92 (78%), Positives = 78/92 (84%)
 Frame = +1

Query: 1   YVPETCYVLHDIGEEEKEIALCHHSEKLAIAFGLINTGAGTSIQVIKNLMICGDCYAVFK 180
           YV ET +VLHDIGEE+KE  L HHSEKLA+AFGLI+T  GT IQVIKNL ICGDC+ V K
Sbjct: 487 YVAETSFVLHDIGEEDKENVLGHHSEKLAVAFGLISTSEGTPIQVIKNLRICGDCHFVIK 546

Query: 181 LISKIYEREIIVRDRSRFHRFKEGSCSCGDYW 276
           LISKIY+REIIVRDR RFHRFKEG CSC DYW
Sbjct: 547 LISKIYDREIIVRDRVRFHRFKEGFCSCRDYW 578


>ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g34160-like [Cucumis sativus]
          Length = 576

 Score =  144 bits (364), Expect = 6e-33
 Identities = 69/92 (75%), Positives = 76/92 (82%)
 Frame = +1

Query: 1   YVPETCYVLHDIGEEEKEIALCHHSEKLAIAFGLINTGAGTSIQVIKNLMICGDCYAVFK 180
           Y  +T  VLHDIG+E+KE ALC+HSEKLA+AFGL  T  GT IQVIKNL ICGDC+ V K
Sbjct: 485 YSADTSNVLHDIGDEDKENALCYHSEKLAVAFGLTCTEEGTPIQVIKNLRICGDCHVVIK 544

Query: 181 LISKIYEREIIVRDRSRFHRFKEGSCSCGDYW 276
           LISKIY REIIVRDR+RFHRFKEG CSC DYW
Sbjct: 545 LISKIYIREIIVRDRTRFHRFKEGLCSCKDYW 576


>ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g34160-like [Cucumis sativus]
          Length = 576

 Score =  144 bits (364), Expect = 6e-33
 Identities = 69/92 (75%), Positives = 76/92 (82%)
 Frame = +1

Query: 1   YVPETCYVLHDIGEEEKEIALCHHSEKLAIAFGLINTGAGTSIQVIKNLMICGDCYAVFK 180
           Y  +T  VLHDIG+E+KE ALC+HSEKLA+AFGL  T  GT IQVIKNL ICGDC+ V K
Sbjct: 485 YSADTSNVLHDIGDEDKENALCYHSEKLAVAFGLTCTEEGTPIQVIKNLRICGDCHVVIK 544

Query: 181 LISKIYEREIIVRDRSRFHRFKEGSCSCGDYW 276
           LISKIY REIIVRDR+RFHRFKEG CSC DYW
Sbjct: 545 LISKIYIREIIVRDRTRFHRFKEGLCSCKDYW 576


>ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 689

 Score =  142 bits (358), Expect = 3e-32
 Identities = 66/92 (71%), Positives = 75/92 (81%)
 Frame = +1

Query: 1   YVPETCYVLHDIGEEEKEIALCHHSEKLAIAFGLINTGAGTSIQVIKNLMICGDCYAVFK 180
           Y+P+T +VLHDI EEEKE  L  HSEKLAIAFGL+NT  G  ++V KNL ICGDC+A  K
Sbjct: 598 YIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATK 657

Query: 181 LISKIYEREIIVRDRSRFHRFKEGSCSCGDYW 276
            ISKIYEREIIVRD +RFH FK+GSCSCGDYW
Sbjct: 658 FISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 689