BLASTX nr result

ID: Coptis25_contig00017611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017611
         (940 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273600.1| PREDICTED: alanyl-tRNA editing protein AlaX-...   362   5e-98
emb|CBI26074.3| unnamed protein product [Vitis vinifera]              352   7e-95
gb|AFK47580.1| unknown [Lotus japonicus]                              351   2e-94
ref|NP_001242235.1| uncharacterized protein LOC100781401 [Glycin...   349   5e-94
ref|XP_003609668.1| Alanyl-tRNA synthetase [Medicago truncatula]...   340   4e-91

>ref|XP_002273600.1| PREDICTED: alanyl-tRNA editing protein AlaX-L-like [Vitis vinifera]
          Length = 256

 Score =  362 bits (930), Expect = 5e-98
 Identities = 176/255 (69%), Positives = 212/255 (83%)
 Frame = -3

Query: 896 DSNKTQLEYFDNMWKLESQATLISYNQGEDGRRALILDSTIFHPQGGGQPYDTGYITNAV 717
           D + T+L Y+D+M+ L+S ATL+S+ +G+DGRRALILDSTIFHPQGGGQP DTG+I  + 
Sbjct: 2   DWSPTKLLYYDHMFLLQSSATLLSFFKGDDGRRALILDSTIFHPQGGGQPSDTGFIAISE 61

Query: 716 SDFKFLVQDVRLKDGLVFHYGEFKDCGGGECDWKIEKGLELCLFVDEQRRSLNSRLHSAG 537
           SD KF+VQDVR KDG+VFHYG F +    E + K+EKG E+ L VDE RR LNSRLHSAG
Sbjct: 62  SDIKFIVQDVRSKDGVVFHYG-FIENSNEELESKLEKGKEVSLHVDESRRKLNSRLHSAG 120

Query: 536 HLLDVCIRNVGLDNLEPGKAYHFPDGPFVEYKGTILQSELQKKQKELELDANALIAKGMK 357
           HLLD+C+R VGL NLEPGK YHFPDGPFVEYKG + Q+ELQ KQKELELDANALI++G K
Sbjct: 121 HLLDICMRTVGLGNLEPGKGYHFPDGPFVEYKGVVPQNELQGKQKELELDANALISRGGK 180

Query: 356 VYATILSYEDALESCGGQLPDYIPKGSSPRILRLGNNPGCPCGGTHVADISDIKSLKVSQ 177
           V A +L Y +A+E CGG LPDYIPK S+PRIL+LG+NPGCPCGGTHV+DIS+I S+KV+Q
Sbjct: 181 VSAVVLPYAEAVELCGGCLPDYIPKSSNPRILKLGDNPGCPCGGTHVSDISEIISVKVTQ 240

Query: 176 IRIKKGCTKVFYDVG 132
           IR KKG TKV+Y +G
Sbjct: 241 IRTKKGVTKVYYTIG 255


>emb|CBI26074.3| unnamed protein product [Vitis vinifera]
          Length = 243

 Score =  352 bits (903), Expect = 7e-95
 Identities = 171/243 (70%), Positives = 203/243 (83%)
 Frame = -3

Query: 860 MWKLESQATLISYNQGEDGRRALILDSTIFHPQGGGQPYDTGYITNAVSDFKFLVQDVRL 681
           M+ L+S ATL+S+ +G+DGRRALILDSTIFHPQGGGQP DTG+I  + SD KF+VQDVR 
Sbjct: 1   MFLLQSSATLLSFFKGDDGRRALILDSTIFHPQGGGQPSDTGFIAISESDIKFIVQDVRS 60

Query: 680 KDGLVFHYGEFKDCGGGECDWKIEKGLELCLFVDEQRRSLNSRLHSAGHLLDVCIRNVGL 501
           KDG+VFHYG F +    E + K+EKG E+ L VDE RR LNSRLHSAGHLLD+C+R VGL
Sbjct: 61  KDGVVFHYG-FIENSNEELESKLEKGKEVSLHVDESRRKLNSRLHSAGHLLDICMRTVGL 119

Query: 500 DNLEPGKAYHFPDGPFVEYKGTILQSELQKKQKELELDANALIAKGMKVYATILSYEDAL 321
            NLEPGK YHFPDGPFVEYKG + Q+ELQ KQKELELDANALI++G KV A +L Y +A+
Sbjct: 120 GNLEPGKGYHFPDGPFVEYKGVVPQNELQGKQKELELDANALISRGGKVSAVVLPYAEAV 179

Query: 320 ESCGGQLPDYIPKGSSPRILRLGNNPGCPCGGTHVADISDIKSLKVSQIRIKKGCTKVFY 141
           E CGG LPDYIPK S+PRIL+LG+NPGCPCGGTHV+DIS+I S+KV+QIR KKG TKV+Y
Sbjct: 180 ELCGGCLPDYIPKSSNPRILKLGDNPGCPCGGTHVSDISEIISVKVTQIRTKKGVTKVYY 239

Query: 140 DVG 132
            +G
Sbjct: 240 TIG 242


>gb|AFK47580.1| unknown [Lotus japonicus]
          Length = 256

 Score =  351 bits (900), Expect = 2e-94
 Identities = 168/254 (66%), Positives = 208/254 (81%)
 Frame = -3

Query: 896 DSNKTQLEYFDNMWKLESQATLISYNQGEDGRRALILDSTIFHPQGGGQPYDTGYITNAV 717
           D N T+L+Y+D++W L+S ATL+S+ +G+DGR ALILD TIF+PQGGGQP DTG+I    
Sbjct: 2   DKNPTKLDYYDDIWMLQSTATLLSHFKGDDGRHALILDRTIFYPQGGGQPADTGFICIEG 61

Query: 716 SDFKFLVQDVRLKDGLVFHYGEFKDCGGGECDWKIEKGLELCLFVDEQRRSLNSRLHSAG 537
           SD KF+V DVR KDG+VFHYG+F++ GG E +  +EKG E+ LFVDE RR LNSRLHSAG
Sbjct: 62  SDIKFVVHDVRSKDGIVFHYGDFENLGG-EVELTLEKGKEVSLFVDESRRKLNSRLHSAG 120

Query: 536 HLLDVCIRNVGLDNLEPGKAYHFPDGPFVEYKGTILQSELQKKQKELELDANALIAKGMK 357
           HLLD+C+  +GL +LEPGKAYHF DGP+VEYKG I Q+E+Q KQK+LEL+ANALI+ G K
Sbjct: 121 HLLDICLPRIGLGHLEPGKAYHFADGPWVEYKGVIPQNEIQNKQKDLELEANALISVGGK 180

Query: 356 VYATILSYEDALESCGGQLPDYIPKGSSPRILRLGNNPGCPCGGTHVADISDIKSLKVSQ 177
           V A IL Y++A + CGG LPDY+PK S+PRI+ +G NPGCPCGGTHVADISDI  +KVSQ
Sbjct: 181 VSADILLYDEAAKLCGGCLPDYVPKESTPRIVTIGGNPGCPCGGTHVADISDIIQIKVSQ 240

Query: 176 IRIKKGCTKVFYDV 135
           IR KKG TKV+Y+V
Sbjct: 241 IRSKKGQTKVYYNV 254


>ref|NP_001242235.1| uncharacterized protein LOC100781401 [Glycine max]
           gi|255638817|gb|ACU19712.1| unknown [Glycine max]
          Length = 262

 Score =  349 bits (896), Expect = 5e-94
 Identities = 169/259 (65%), Positives = 209/259 (80%), Gaps = 1/259 (0%)
 Frame = -3

Query: 908 LQMADSNKTQLEYFDNMWKLESQATLISYNQGEDGRRALILDSTIFHPQGGGQPYDTGYI 729
           L + D N T+LE+FD+MW+LES ATL+S+ +G+DGR  L LD TIF+PQGGGQP DTG++
Sbjct: 3   LGLMDKNPTKLEHFDDMWRLESTATLLSHLKGDDGRHVLTLDRTIFYPQGGGQPADTGFV 62

Query: 728 T-NAVSDFKFLVQDVRLKDGLVFHYGEFKDCGGGECDWKIEKGLELCLFVDEQRRSLNSR 552
             +   + KFLV DVR KDG+VFHYG F++ GG E +  +EKG E+ LFVD+ RR LNSR
Sbjct: 63  LIHGFDNNKFLVSDVRSKDGIVFHYGFFENLGG-EFEPTLEKGKEVSLFVDQPRRKLNSR 121

Query: 551 LHSAGHLLDVCIRNVGLDNLEPGKAYHFPDGPFVEYKGTILQSELQKKQKELELDANALI 372
           LHSAGHLLD+C+  +GL NLEPGKAYHFPDGP+VEYKGTI Q+E+Q KQK+LEL+ANALI
Sbjct: 122 LHSAGHLLDICLPRIGLGNLEPGKAYHFPDGPWVEYKGTISQNEMQSKQKDLELEANALI 181

Query: 371 AKGMKVYATILSYEDALESCGGQLPDYIPKGSSPRILRLGNNPGCPCGGTHVADISDIKS 192
           + G KV   IL Y++A + CGG LPDY+PK S+PRI+R+ +NPGCPCGGTHVADISDIK 
Sbjct: 182 SMGGKVSVDILPYDEAAKLCGGCLPDYVPKESTPRIVRIRDNPGCPCGGTHVADISDIKQ 241

Query: 191 LKVSQIRIKKGCTKVFYDV 135
           +KVSQIR KKG TK +Y V
Sbjct: 242 IKVSQIRSKKGLTKAYYYV 260


>ref|XP_003609668.1| Alanyl-tRNA synthetase [Medicago truncatula]
           gi|355510723|gb|AES91865.1| Alanyl-tRNA synthetase
           [Medicago truncatula]
          Length = 258

 Score =  340 bits (871), Expect = 4e-91
 Identities = 161/254 (63%), Positives = 203/254 (79%)
 Frame = -3

Query: 896 DSNKTQLEYFDNMWKLESQATLISYNQGEDGRRALILDSTIFHPQGGGQPYDTGYITNAV 717
           D + T+L+Y+D+MW L S ATL+S+ +G+DGR  LILD TIF+PQGGGQP DTG++    
Sbjct: 4   DKSPTKLDYYDDMWNLHSTATLVSHFKGDDGRHVLILDRTIFYPQGGGQPADTGFLIIHD 63

Query: 716 SDFKFLVQDVRLKDGLVFHYGEFKDCGGGECDWKIEKGLELCLFVDEQRRSLNSRLHSAG 537
           S+ KF+V DVR KDG+V HYG F+  GG E +  +EKG E+ L VDE RR LNSRLHSAG
Sbjct: 64  SNIKFVVHDVRSKDGIVLHYGVFEGMGG-EFEGTLEKGKEVSLSVDEDRRKLNSRLHSAG 122

Query: 536 HLLDVCIRNVGLDNLEPGKAYHFPDGPFVEYKGTILQSELQKKQKELELDANALIAKGMK 357
           HLLD+C+  +GL +LEPGKAYHF DGP+VEYKG + Q+E+Q KQKELE++ANALI+ G K
Sbjct: 123 HLLDICLPKIGLGHLEPGKAYHFSDGPWVEYKGVVPQNEMQNKQKELEIEANALISMGGK 182

Query: 356 VYATILSYEDALESCGGQLPDYIPKGSSPRILRLGNNPGCPCGGTHVADISDIKSLKVSQ 177
           V A IL Y++A + CGG LPDY+PK S+PRI+++G+NPGCPCGGTHV D+SDI  +KVSQ
Sbjct: 183 VSADILLYDEAAKLCGGILPDYVPKESTPRIVQIGDNPGCPCGGTHVLDVSDITKIKVSQ 242

Query: 176 IRIKKGCTKVFYDV 135
           IR KKG TKVFY+V
Sbjct: 243 IRSKKGMTKVFYNV 256


Top