BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017607
         (1874 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containi...   397   e-108
emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]   397   e-108
ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containi...   375   e-101
emb|CBI16436.3| unnamed protein product [Vitis vinifera]              367   4e-99
ref|XP_003619639.1| Pentatricopeptide repeat-containing protein ...   367   6e-99

>ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
            [Vitis vinifera]
          Length = 624

 Score =  397 bits (1021), Expect = e-108
 Identities = 185/235 (78%), Positives = 209/235 (88%)
 Frame = +2

Query: 2    HYGCMVDLLGRAGFLKEAEDMILTMPVAPDAIIWGALLGACRIHRDTEMGERIGKIISEL 181
            HYGCMVDLLGR+G LKEAE+ +  MP+APDA IWGALLGACRIH+D E G+RIGKII EL
Sbjct: 390  HYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKEL 449

Query: 182  DPSNVGCNVLLANMYSASGRWTEAKVLREKVELGGVKKTPGCTSIELNGMVHQFLVGDRS 361
            D  ++GC+VLLAN+YSASG+W EAK +R+K+E+ G KKTPGC+SIELNG+ HQFLVGDRS
Sbjct: 450  DSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRS 509

Query: 362  HPQTEQIYSFLDEMTVKLKIAGYVPEIGEVLLDISDEEDKETALSRHSEKLAIAFGLINT 541
            HPQT+Q+Y FLDEMT KLK AGYVPE GEVLLDI DEEDKETALS+HSEKLAIAFGLINT
Sbjct: 510  HPQTKQLYLFLDEMTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINT 569

Query: 542  APGTPIRIMKNLRVCCDCHEATKFISKVYNREIIVRDRLRFHHVRDGQCSCKDYW 706
             PGT IRI+KNLRVC DCHEATKFISKVY REIIVRDR+R+HH +DG CSCKDYW
Sbjct: 570  PPGTAIRIVKNLRVCADCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 624


>emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
          Length = 539

 Score =  397 bits (1021), Expect = e-108
 Identities = 185/235 (78%), Positives = 209/235 (88%)
 Frame = +2

Query: 2    HYGCMVDLLGRAGFLKEAEDMILTMPVAPDAIIWGALLGACRIHRDTEMGERIGKIISEL 181
            HYGCMVDLLGR+G LKEAE+ +  MP+APDA IWGALLGACRIH+D E G+RIGKII EL
Sbjct: 305  HYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKEL 364

Query: 182  DPSNVGCNVLLANMYSASGRWTEAKVLREKVELGGVKKTPGCTSIELNGMVHQFLVGDRS 361
            D  ++GC+VLLAN+YSASG+W EAK +R+K+E+ G KKTPGC+SIELNG+ HQFLVGDRS
Sbjct: 365  DSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRS 424

Query: 362  HPQTEQIYSFLDEMTVKLKIAGYVPEIGEVLLDISDEEDKETALSRHSEKLAIAFGLINT 541
            HPQT+Q+Y FLDEMT KLK AGYVPE GEVLLDI DEEDKETALS+HSEKLAIAFGLINT
Sbjct: 425  HPQTKQLYLFLDEMTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINT 484

Query: 542  APGTPIRIMKNLRVCCDCHEATKFISKVYNREIIVRDRLRFHHVRDGQCSCKDYW 706
             PGT IRI+KNLRVC DCHEATKFISKVY REIIVRDR+R+HH +DG CSCKDYW
Sbjct: 485  PPGTAIRIVKNLRVCADCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 539


>ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Cucumis sativus] gi|449516005|ref|XP_004165038.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At5g66520-like [Cucumis sativus]
          Length = 609

 Score =  375 bits (963), Expect = e-101
 Identities = 173/235 (73%), Positives = 202/235 (85%)
 Frame = +2

Query: 2    HYGCMVDLLGRAGFLKEAEDMILTMPVAPDAIIWGALLGACRIHRDTEMGERIGKIISEL 181
            HYGC+VDLLGRAG LKEAE++I +M + PD  IWGALL AC+IH+D EMGER+GKI+ EL
Sbjct: 375  HYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLSACKIHKDAEMGERVGKIVKEL 434

Query: 182  DPSNVGCNVLLANMYSASGRWTEAKVLREKVELGGVKKTPGCTSIELNGMVHQFLVGDRS 361
            DP+++GC+VLLAN+YS +G W EA+ LREK+   G KKTPGC+SIELNGM HQFLVGDRS
Sbjct: 435  DPNHLGCHVLLANIYSLTGNWNEARTLREKIAESGKKKTPGCSSIELNGMFHQFLVGDRS 494

Query: 362  HPQTEQIYSFLDEMTVKLKIAGYVPEIGEVLLDISDEEDKETALSRHSEKLAIAFGLINT 541
            HPQT+Q+Y FLDEM  KLKIAGY+PE GEVLLDI D ED+ETAL +HSEKLAIAFGL+NT
Sbjct: 495  HPQTKQLYLFLDEMITKLKIAGYIPESGEVLLDIDDNEDRETALLKHSEKLAIAFGLMNT 554

Query: 542  APGTPIRIMKNLRVCCDCHEATKFISKVYNREIIVRDRLRFHHVRDGQCSCKDYW 706
             P TPIRI+KNLRVC DCH A KFISKVY+REIIVRDR+R+HH +DG CSC DYW
Sbjct: 555  TPKTPIRIVKNLRVCSDCHLAIKFISKVYDREIIVRDRIRYHHFKDGTCSCNDYW 609


>emb|CBI16436.3| unnamed protein product [Vitis vinifera]
          Length = 545

 Score =  367 bits (943), Expect = 4e-99
 Identities = 171/220 (77%), Positives = 195/220 (88%)
 Frame = +2

Query: 47  KEAEDMILTMPVAPDAIIWGALLGACRIHRDTEMGERIGKIISELDPSNVGCNVLLANMY 226
           +EAE+ +  MP+APDA IWGALLGACRIH+D E G+RIGKII ELD  ++GC+VLLAN+Y
Sbjct: 326 REAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLY 385

Query: 227 SASGRWTEAKVLREKVELGGVKKTPGCTSIELNGMVHQFLVGDRSHPQTEQIYSFLDEMT 406
           SASG+W EAK +R+K+E+ G KKTPGC+SIELNG+ HQFLVGDRSHPQT+Q+Y FLDEMT
Sbjct: 386 SASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMT 445

Query: 407 VKLKIAGYVPEIGEVLLDISDEEDKETALSRHSEKLAIAFGLINTAPGTPIRIMKNLRVC 586
            KLK AGYVPE GEVLLDI DEEDKETALS+HSEKLAIAFGLINT PGT IRI+KNLRVC
Sbjct: 446 TKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRIVKNLRVC 505

Query: 587 CDCHEATKFISKVYNREIIVRDRLRFHHVRDGQCSCKDYW 706
            DCHEATKFISKVY REIIVRDR+R+HH +DG CSCKDYW
Sbjct: 506 ADCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 545


>ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355494654|gb|AES75857.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1182

 Score =  367 bits (942), Expect = 6e-99
 Identities = 174/235 (74%), Positives = 205/235 (87%), Gaps = 1/235 (0%)
 Frame = +2

Query: 2    HYGCMVDLLGRAGFLKEAEDMILTMPVAPDAIIWGALLGACRIHRDTEMGERIGKIISEL 181
            HYGCMVDLL R+G LK++E+MIL+MP+APD  IWGALL ACRI++D E G RIG+II E+
Sbjct: 550  HYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKEI 609

Query: 182  DPSNVGCNVLLANMYSASGRWTEAKVLREKVELGGV-KKTPGCTSIELNGMVHQFLVGDR 358
            DP+++GCNVLL N+YS SGRW EA+++REK E+    KK PG +SIELNG+ H+FLVGDR
Sbjct: 610  DPNHIGCNVLLGNIYSTSGRWNEARMVREKNEINSDRKKIPGFSSIELNGVFHEFLVGDR 669

Query: 359  SHPQTEQIYSFLDEMTVKLKIAGYVPEIGEVLLDISDEEDKETALSRHSEKLAIAFGLIN 538
            SHPQ+ +IYSFLDEM  KLKIAGYVPE+GEVLLD  DEEDKETALS HSEKLAIAFGL+N
Sbjct: 670  SHPQSREIYSFLDEMISKLKIAGYVPELGEVLLDFDDEEDKETALSVHSEKLAIAFGLMN 729

Query: 539  TAPGTPIRIMKNLRVCCDCHEATKFISKVYNREIIVRDRLRFHHVRDGQCSCKDY 703
            TAPGTPIRI+KNLRVC DCH+ATKFISKVY+R IIVRDR+R+HH +DG CSCKDY
Sbjct: 730  TAPGTPIRIVKNLRVCGDCHQATKFISKVYDRVIIVRDRMRYHHFKDGICSCKDY 784