BLASTX nr result

ID: Coptis25_contig00017604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017604
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001783652.1| predicted protein [Physcomitrella patens sub...   108   2e-33
ref|XP_002304855.1| predicted protein [Populus trichocarpa] gi|1...   119   2e-25
dbj|BAJ88724.1| predicted protein [Hordeum vulgare subsp. vulgare]    119   3e-25
ref|XP_002532069.1| mitochondrial oxoglutarate/malate carrier pr...   119   3e-25
ref|XP_002439442.1| hypothetical protein SORBIDRAFT_09g006480 [S...   118   4e-25

>ref|XP_001783652.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162664842|gb|EDQ51547.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 310

 Score =  108 bits (270), Expect(2) = 2e-33
 Identities = 49/70 (70%), Positives = 55/70 (78%)
 Frame = -3

Query: 361 KPKYRKCNLDASGKYPYTGSLDCTMKTLKSGGPLKFYTGFSVYCVRIAPHVMMTWIFLSQ 182
           K + +K      G+YPYTGS+DC +KTL  GGPLKFYTGF  YCVRIAPHVMMTWIFL+Q
Sbjct: 241 KTQIQKMQPGPDGRYPYTGSVDCALKTLAQGGPLKFYTGFGTYCVRIAPHVMMTWIFLNQ 300

Query: 181 IQKLEKSISL 152
           IQKLEKS  L
Sbjct: 301 IQKLEKSYGL 310



 Score = 59.3 bits (142), Expect(2) = 2e-33
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = -2

Query: 422 GASTVSGFFAAACSLPFDYVKTQIQKMQP 336
           GAS VSGFFA+ACSLPFDYVKTQIQKMQP
Sbjct: 221 GASAVSGFFASACSLPFDYVKTQIQKMQP 249


>ref|XP_002304855.1| predicted protein [Populus trichocarpa] gi|118487618|gb|ABK95634.1|
           unknown [Populus trichocarpa]
           gi|222842287|gb|EEE79834.1| predicted protein [Populus
           trichocarpa]
          Length = 299

 Score =  119 bits (299), Expect = 2e-25
 Identities = 54/70 (77%), Positives = 60/70 (85%)
 Frame = -3

Query: 361 KPKYRKCNLDASGKYPYTGSLDCTMKTLKSGGPLKFYTGFSVYCVRIAPHVMMTWIFLSQ 182
           K + +K   DA GKYPYTGS+DC +KTLKSGGP KFYTGF VYCVRIAPHVMMTWIFL+Q
Sbjct: 230 KTQIQKMQPDAQGKYPYTGSMDCALKTLKSGGPFKFYTGFPVYCVRIAPHVMMTWIFLNQ 289

Query: 181 IQKLEKSISL 152
           IQKLEKS+ L
Sbjct: 290 IQKLEKSVGL 299



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/36 (83%), Positives = 32/36 (88%)
 Frame = -2

Query: 422 GASTVSGFFAAACSLPFDYVKTQIQKMQP*CKRKIP 315
           GAS+VSGFFAAACSLPFDYVKTQIQKMQP  + K P
Sbjct: 210 GASSVSGFFAAACSLPFDYVKTQIQKMQPDAQGKYP 245


>dbj|BAJ88724.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 306

 Score =  119 bits (297), Expect = 3e-25
 Identities = 54/70 (77%), Positives = 60/70 (85%)
 Frame = -3

Query: 361 KPKYRKCNLDASGKYPYTGSLDCTMKTLKSGGPLKFYTGFSVYCVRIAPHVMMTWIFLSQ 182
           K + +K   DA+GKYPYTGSLDC MKTLKSGGP KFYTGF VYCVRIAPHVMMTWIFL+Q
Sbjct: 237 KTQVQKMQPDATGKYPYTGSLDCAMKTLKSGGPFKFYTGFPVYCVRIAPHVMMTWIFLNQ 296

Query: 181 IQKLEKSISL 152
           IQK+EK + L
Sbjct: 297 IQKVEKRVGL 306



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -2

Query: 422 GASTVSGFFAAACSLPFDYVKTQIQKMQP*CKRKIP 315
           GAS VSGFFA+ACSLPFDYVKTQ+QKMQP    K P
Sbjct: 217 GASAVSGFFASACSLPFDYVKTQVQKMQPDATGKYP 252


>ref|XP_002532069.1| mitochondrial oxoglutarate/malate carrier protein, putative
           [Ricinus communis] gi|223528273|gb|EEF30324.1|
           mitochondrial oxoglutarate/malate carrier protein,
           putative [Ricinus communis]
          Length = 300

 Score =  119 bits (297), Expect = 3e-25
 Identities = 54/70 (77%), Positives = 59/70 (84%)
 Frame = -3

Query: 361 KPKYRKCNLDASGKYPYTGSLDCTMKTLKSGGPLKFYTGFSVYCVRIAPHVMMTWIFLSQ 182
           K + +K   DA GKYPYTGSLDC MKTLKSGGP KFYTGF VYCVRIAPHVMMTWIFL+Q
Sbjct: 231 KTQIQKMQPDAQGKYPYTGSLDCAMKTLKSGGPFKFYTGFPVYCVRIAPHVMMTWIFLNQ 290

Query: 181 IQKLEKSISL 152
           IQK EK++ L
Sbjct: 291 IQKFEKTVGL 300



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/36 (80%), Positives = 31/36 (86%)
 Frame = -2

Query: 422 GASTVSGFFAAACSLPFDYVKTQIQKMQP*CKRKIP 315
           GAS VSGFFA+ACSLPFDYVKTQIQKMQP  + K P
Sbjct: 211 GASAVSGFFASACSLPFDYVKTQIQKMQPDAQGKYP 246


>ref|XP_002439442.1| hypothetical protein SORBIDRAFT_09g006480 [Sorghum bicolor]
           gi|241944727|gb|EES17872.1| hypothetical protein
           SORBIDRAFT_09g006480 [Sorghum bicolor]
          Length = 308

 Score =  118 bits (296), Expect = 4e-25
 Identities = 54/70 (77%), Positives = 59/70 (84%)
 Frame = -3

Query: 361 KPKYRKCNLDASGKYPYTGSLDCTMKTLKSGGPLKFYTGFSVYCVRIAPHVMMTWIFLSQ 182
           K + +K   DA+GKYPYTGSLDC MKT KSGGP KFYTGF VYCVRIAPHVMMTWIFL+Q
Sbjct: 239 KTQIQKMQPDANGKYPYTGSLDCAMKTFKSGGPFKFYTGFPVYCVRIAPHVMMTWIFLNQ 298

Query: 181 IQKLEKSISL 152
           IQKLEK I +
Sbjct: 299 IQKLEKKIGI 308



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -2

Query: 422 GASTVSGFFAAACSLPFDYVKTQIQKMQP*CKRKIP 315
           GAS +SGFFA+ACSLPFDYVKTQIQKMQP    K P
Sbjct: 219 GASAISGFFASACSLPFDYVKTQIQKMQPDANGKYP 254


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