BLASTX nr result

ID: Coptis25_contig00017596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017596
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33172.3| unnamed protein product [Vitis vinifera]              197   7e-49
ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like...   197   7e-49
emb|CAN64633.1| hypothetical protein VITISV_043788 [Vitis vinifera]   197   7e-49
ref|XP_002312063.1| predicted protein [Populus trichocarpa] gi|2...   197   1e-48
ref|XP_002315251.1| predicted protein [Populus trichocarpa] gi|2...   196   2e-48

>emb|CBI33172.3| unnamed protein product [Vitis vinifera]
          Length = 934

 Score =  197 bits (501), Expect = 7e-49
 Identities = 88/103 (85%), Positives = 97/103 (94%)
 Frame = -1

Query: 309  KLLRKCENKLFPHTIVSVHTCRDRIYVGDIQESFHFCKYRRDENQIYNFADDSLPRWLTA 130
            +LLRKCENKLFP+TIVS+HT RDRIYVGDIQESFH+CKYRRDENQ+Y FADDS+PRWLTA
Sbjct: 694  RLLRKCENKLFPNTIVSIHTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTA 753

Query: 129  SYRIDFDTMAGADKFGNIYFTRIPQHISDRIEEDPTGGKIKWE 1
            SY IDFDTMAGADKFGNIYF R+PQ +SD +EEDPTGGKIKWE
Sbjct: 754  SYHIDFDTMAGADKFGNIYFVRLPQDVSDEVEEDPTGGKIKWE 796


>ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like [Vitis vinifera]
          Length = 1214

 Score =  197 bits (501), Expect = 7e-49
 Identities = 88/103 (85%), Positives = 97/103 (94%)
 Frame = -1

Query: 309  KLLRKCENKLFPHTIVSVHTCRDRIYVGDIQESFHFCKYRRDENQIYNFADDSLPRWLTA 130
            +LLRKCENKLFP+TIVS+HT RDRIYVGDIQESFH+CKYRRDENQ+Y FADDS+PRWLTA
Sbjct: 974  RLLRKCENKLFPNTIVSIHTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTA 1033

Query: 129  SYRIDFDTMAGADKFGNIYFTRIPQHISDRIEEDPTGGKIKWE 1
            SY IDFDTMAGADKFGNIYF R+PQ +SD +EEDPTGGKIKWE
Sbjct: 1034 SYHIDFDTMAGADKFGNIYFVRLPQDVSDEVEEDPTGGKIKWE 1076


>emb|CAN64633.1| hypothetical protein VITISV_043788 [Vitis vinifera]
          Length = 1143

 Score =  197 bits (501), Expect = 7e-49
 Identities = 88/103 (85%), Positives = 97/103 (94%)
 Frame = -1

Query: 309  KLLRKCENKLFPHTIVSVHTCRDRIYVGDIQESFHFCKYRRDENQIYNFADDSLPRWLTA 130
            +LLRKCENKLFP+TIVS+HT RDRIYVGDIQESFH+CKYRRDENQ+Y FADDS+PRWLTA
Sbjct: 933  RLLRKCENKLFPNTIVSIHTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTA 992

Query: 129  SYRIDFDTMAGADKFGNIYFTRIPQHISDRIEEDPTGGKIKWE 1
            SY IDFDTMAGADKFGNIYF R+PQ +SD +EEDPTGGKIKWE
Sbjct: 993  SYHIDFDTMAGADKFGNIYFVRLPQDVSDEVEEDPTGGKIKWE 1035


>ref|XP_002312063.1| predicted protein [Populus trichocarpa] gi|222851883|gb|EEE89430.1|
            predicted protein [Populus trichocarpa]
          Length = 1213

 Score =  197 bits (500), Expect = 1e-48
 Identities = 88/103 (85%), Positives = 97/103 (94%)
 Frame = -1

Query: 309  KLLRKCENKLFPHTIVSVHTCRDRIYVGDIQESFHFCKYRRDENQIYNFADDSLPRWLTA 130
            +LLRKCENKLFP++IVS+HT RDRIYVGDIQESFHFCKYRRDENQ+Y FADDS+PRWLTA
Sbjct: 973  RLLRKCENKLFPNSIVSIHTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTA 1032

Query: 129  SYRIDFDTMAGADKFGNIYFTRIPQHISDRIEEDPTGGKIKWE 1
            SY +DFDTMAGADKFGNIYF R+PQ +SD IEEDPTGGKIKWE
Sbjct: 1033 SYHVDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWE 1075


>ref|XP_002315251.1| predicted protein [Populus trichocarpa] gi|222864291|gb|EEF01422.1|
            predicted protein [Populus trichocarpa]
          Length = 1213

 Score =  196 bits (497), Expect = 2e-48
 Identities = 87/103 (84%), Positives = 97/103 (94%)
 Frame = -1

Query: 309  KLLRKCENKLFPHTIVSVHTCRDRIYVGDIQESFHFCKYRRDENQIYNFADDSLPRWLTA 130
            +LLRKCENKLFP+TIVS+HT RDRIYVGDIQESFHFCKYRRDENQ+Y FADDS+PRWLT+
Sbjct: 973  RLLRKCENKLFPNTIVSIHTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTS 1032

Query: 129  SYRIDFDTMAGADKFGNIYFTRIPQHISDRIEEDPTGGKIKWE 1
            SY +DFD+MAGADKFGNIYF R+PQ +SD IEEDPTGGKIKWE
Sbjct: 1033 SYHVDFDSMAGADKFGNIYFARLPQDVSDEIEEDPTGGKIKWE 1075


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