BLASTX nr result

ID: Coptis25_contig00017595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017595
         (1269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268798.2| PREDICTED: uncharacterized protein LOC100251...    93   1e-16
emb|CBI25573.3| unnamed protein product [Vitis vinifera]               93   1e-16
ref|XP_002331009.1| predicted protein [Populus trichocarpa] gi|2...    90   1e-15
ref|XP_002531448.1| conserved hypothetical protein [Ricinus comm...    84   6e-14
emb|CAN69082.1| hypothetical protein VITISV_014065 [Vitis vinifera]    83   1e-13

>ref|XP_002268798.2| PREDICTED: uncharacterized protein LOC100251745 [Vitis vinifera]
          Length = 573

 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 60/133 (45%), Positives = 76/133 (57%), Gaps = 12/133 (9%)
 Frame = -1

Query: 363 SKTIPGTIWMT*TQLVTVSCLLKLSVT---AFYAATSLLRID*GVQFSVVIQTSTSALFG 193
           SKTIP TIWMT TQ++ V   L  +       YAAT+LL I  GVQFS+++ T  S LFG
Sbjct: 413 SKTIPRTIWMTCTQVIMVITYLLFASALDGTLYAATALLGICYGVQFSIMVPT-VSELFG 471

Query: 192 *KNFNVIYNFMLLGNFLGVLSFHV---------GTCKELRIKTARTCVSCLGPN*SRLTF 40
            K+F + YNFM LGN LG   F              K+  +    + VSCLGPN  RLTF
Sbjct: 472 LKHFGIFYNFMSLGNPLGAFLFSGLLAGFVYDNEAAKQQGMNLLNSSVSCLGPNCFRLTF 531

Query: 39  VVQHGLCVLGLLL 1
           +V  G+C +G +L
Sbjct: 532 LVLAGVCGVGSIL 544


>emb|CBI25573.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 60/133 (45%), Positives = 76/133 (57%), Gaps = 12/133 (9%)
 Frame = -1

Query: 363 SKTIPGTIWMT*TQLVTVSCLLKLSVT---AFYAATSLLRID*GVQFSVVIQTSTSALFG 193
           SKTIP TIWMT TQ++ V   L  +       YAAT+LL I  GVQFS+++ T  S LFG
Sbjct: 352 SKTIPRTIWMTCTQVIMVITYLLFASALDGTLYAATALLGICYGVQFSIMVPT-VSELFG 410

Query: 192 *KNFNVIYNFMLLGNFLGVLSFHV---------GTCKELRIKTARTCVSCLGPN*SRLTF 40
            K+F + YNFM LGN LG   F              K+  +    + VSCLGPN  RLTF
Sbjct: 411 LKHFGIFYNFMSLGNPLGAFLFSGLLAGFVYDNEAAKQQGMNLLNSSVSCLGPNCFRLTF 470

Query: 39  VVQHGLCVLGLLL 1
           +V  G+C +G +L
Sbjct: 471 LVLAGVCGVGSIL 483


>ref|XP_002331009.1| predicted protein [Populus trichocarpa] gi|222872939|gb|EEF10070.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 59/134 (44%), Positives = 77/134 (57%), Gaps = 13/134 (9%)
 Frame = -1

Query: 363 SKTIPGTIWMT*TQLVTVSCLLKLSVTA---FYAATSLLRID*GVQFSVVIQTSTSALFG 193
           SKTIP TIWMT TQ++ +   L  +       YAAT+LL I  GVQFS++I T  S LFG
Sbjct: 412 SKTIPRTIWMTCTQVMMIITYLLFASAIDGILYAATALLGICYGVQFSIMIPT-VSELFG 470

Query: 192 *KNFNVIYNFMLLGNFLGVLSF----------HVGTCKELRIKTARTCVSCLGPN*SRLT 43
            K+F + YNFM LGN LG   F          +    +++    + + +SCLGPN  RLT
Sbjct: 471 LKHFGLFYNFMSLGNPLGAFLFSGLLAGYVYDNEAAKQQVPNLLSNSSISCLGPNCFRLT 530

Query: 42  FVVQHGLCVLGLLL 1
           F+V  G C LG +L
Sbjct: 531 FLVLAGACGLGSIL 544


>ref|XP_002531448.1| conserved hypothetical protein [Ricinus communis]
           gi|223528941|gb|EEF30935.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 570

 Score = 84.3 bits (207), Expect = 6e-14
 Identities = 54/134 (40%), Positives = 80/134 (59%), Gaps = 13/134 (9%)
 Frame = -1

Query: 363 SKTIPGTIWMT*TQLVTVSCLLKLSVTA---FYAATSLLRID*GVQFSVVIQTSTSALFG 193
           S+TIP TIWMT TQ+V +   L  +       YAAT+LL I  GVQFS++I T  S LFG
Sbjct: 409 SRTIPRTIWMTCTQIVMIITYLLFASAIDGILYAATALLGICYGVQFSIMIPT-VSELFG 467

Query: 192 *KNFNVIYNFMLLGN------FLGVLSFHVGTCKELRIKTAR----TCVSCLGPN*SRLT 43
            K+F + YNF+ +GN      F G+L+ ++   +  + +       + ++C+GPN  RLT
Sbjct: 468 LKHFGIFYNFISIGNPLGAFLFSGLLAGYIYDTEAAKQQGMNLLLGSSIACIGPNCFRLT 527

Query: 42  FVVQHGLCVLGLLL 1
           F+V  G+C +G +L
Sbjct: 528 FLVLAGVCGVGSIL 541


>emb|CAN69082.1| hypothetical protein VITISV_014065 [Vitis vinifera]
          Length = 504

 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 58/126 (46%), Positives = 77/126 (61%), Gaps = 6/126 (4%)
 Frame = -1

Query: 360 KTIPGTIWMT*TQLV-TVSCLLKLSVTA--FYAATSLLRID*GVQFSVVIQTSTSALFG* 190
           KT+P TIWMT +Q+V  V+ LL  S  +   YA+T+LL I  GVQFS+++  + S LFG 
Sbjct: 351 KTLPRTIWMTFSQVVMVVTFLLYASALSGTLYASTALLGICYGVQFSIMVPCA-SELFGL 409

Query: 189 KNFNVIYNFMLLGNFLGVLSFH---VGTCKELRIKTARTCVSCLGPN*SRLTFVVQHGLC 19
           K+F VIYNFMLLGN +G L F     G   +      ++  +CLG    RLTF+V  G C
Sbjct: 410 KHFGVIYNFMLLGNPIGALLFSGLLAGYVYDFEAAKQQSS-TCLGGTCFRLTFLVLAGAC 468

Query: 18  VLGLLL 1
            LG +L
Sbjct: 469 GLGTIL 474


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