BLASTX nr result
ID: Coptis25_contig00017593
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00017593 (267 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002266662.1| PREDICTED: uncharacterized protein LOC100242... 110 1e-22 emb|CAN68081.1| hypothetical protein VITISV_021806 [Vitis vinifera] 110 1e-22 ref|XP_002304393.1| predicted protein [Populus trichocarpa] gi|2... 109 3e-22 ref|XP_002448462.1| hypothetical protein SORBIDRAFT_06g027530 [S... 105 4e-21 ref|NP_001146059.1| uncharacterized protein LOC100279590 [Zea ma... 104 9e-21 >ref|XP_002266662.1| PREDICTED: uncharacterized protein LOC100242504 [Vitis vinifera] gi|296085502|emb|CBI29234.3| unnamed protein product [Vitis vinifera] Length = 553 Score = 110 bits (275), Expect = 1e-22 Identities = 52/83 (62%), Positives = 67/83 (80%) Frame = +3 Query: 3 DFVDSQGRRLKLHFELRGTLLNIFSDMSSSITKGNLEPKSAMAADIVTVGNSWLSSSIKQ 182 DF+ SQGRRL+L RG+L +IFS++ ++KG +EPKSA+AADIVTVG+SWL +I + Sbjct: 172 DFMQSQGRRLRLLSNFRGSLQDIFSELCRPLSKGKIEPKSALAADIVTVGDSWLDLAINK 231 Query: 183 GIIEPIRDVELQDWFKGLSEKWK 251 GIIEPI+ VE QDWF+GLS KWK Sbjct: 232 GIIEPIQGVEDQDWFRGLSYKWK 254 >emb|CAN68081.1| hypothetical protein VITISV_021806 [Vitis vinifera] Length = 875 Score = 110 bits (275), Expect = 1e-22 Identities = 52/83 (62%), Positives = 67/83 (80%) Frame = +3 Query: 3 DFVDSQGRRLKLHFELRGTLLNIFSDMSSSITKGNLEPKSAMAADIVTVGNSWLSSSIKQ 182 DF+ SQGRRL+L RG+L +IFS++ ++KG +EPKSA+AADIVTVG+SWL +I + Sbjct: 480 DFMQSQGRRLRLLSNFRGSLQDIFSELCRPLSKGKIEPKSALAADIVTVGDSWLDLAINK 539 Query: 183 GIIEPIRDVELQDWFKGLSEKWK 251 GIIEPI+ VE QDWF+GLS KWK Sbjct: 540 GIIEPIQGVEDQDWFRGLSYKWK 562 >ref|XP_002304393.1| predicted protein [Populus trichocarpa] gi|222841825|gb|EEE79372.1| predicted protein [Populus trichocarpa] Length = 424 Score = 109 bits (272), Expect = 3e-22 Identities = 51/83 (61%), Positives = 65/83 (78%) Frame = +3 Query: 3 DFVDSQGRRLKLHFELRGTLLNIFSDMSSSITKGNLEPKSAMAADIVTVGNSWLSSSIKQ 182 DF+ SQGRRL+ + G+L NIFSD+S+S K N+ P S +A+DIV+VG+SWLS +IK Sbjct: 42 DFIQSQGRRLRFRVKYLGSLENIFSDISASFNKRNIGPMSTVASDIVSVGDSWLSFAIKN 101 Query: 183 GIIEPIRDVELQDWFKGLSEKWK 251 IIEP+R VE QDWFKGLS+KWK Sbjct: 102 AIIEPVRGVEEQDWFKGLSDKWK 124 >ref|XP_002448462.1| hypothetical protein SORBIDRAFT_06g027530 [Sorghum bicolor] gi|241939645|gb|EES12790.1| hypothetical protein SORBIDRAFT_06g027530 [Sorghum bicolor] Length = 531 Score = 105 bits (262), Expect = 4e-21 Identities = 47/83 (56%), Positives = 65/83 (78%) Frame = +3 Query: 3 DFVDSQGRRLKLHFELRGTLLNIFSDMSSSITKGNLEPKSAMAADIVTVGNSWLSSSIKQ 182 DFV+ QG+RLK ELR L IFS+MS + KG ++PKSAMAAD VT+G+SWL +I+Q Sbjct: 155 DFVEVQGKRLKFSPELRANLDGIFSEMSQCMDKGQVQPKSAMAADAVTLGDSWLGYAIRQ 214 Query: 183 GIIEPIRDVELQDWFKGLSEKWK 251 G++EP+++ E QDWF+ LS++WK Sbjct: 215 GLLEPVKNAEEQDWFRSLSDRWK 237 >ref|NP_001146059.1| uncharacterized protein LOC100279590 [Zea mays] gi|219885513|gb|ACL53131.1| unknown [Zea mays] gi|413919418|gb|AFW59350.1| putative putrescine-binding domain family protein [Zea mays] Length = 530 Score = 104 bits (259), Expect = 9e-21 Identities = 46/83 (55%), Positives = 66/83 (79%) Frame = +3 Query: 3 DFVDSQGRRLKLHFELRGTLLNIFSDMSSSITKGNLEPKSAMAADIVTVGNSWLSSSIKQ 182 DFV++QG+RLK ELR L IFS+MS + KG ++PKSAMAAD+V++G+SWL +I++ Sbjct: 154 DFVEAQGKRLKFSPELRANLDGIFSEMSQCMDKGQVQPKSAMAADVVSLGDSWLGYAIRK 213 Query: 183 GIIEPIRDVELQDWFKGLSEKWK 251 G++EPI++ E QDWF LS++WK Sbjct: 214 GLLEPIKNAEEQDWFHSLSDRWK 236