BLASTX nr result

ID: Coptis25_contig00017593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017593
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266662.1| PREDICTED: uncharacterized protein LOC100242...   110   1e-22
emb|CAN68081.1| hypothetical protein VITISV_021806 [Vitis vinifera]   110   1e-22
ref|XP_002304393.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
ref|XP_002448462.1| hypothetical protein SORBIDRAFT_06g027530 [S...   105   4e-21
ref|NP_001146059.1| uncharacterized protein LOC100279590 [Zea ma...   104   9e-21

>ref|XP_002266662.1| PREDICTED: uncharacterized protein LOC100242504 [Vitis vinifera]
           gi|296085502|emb|CBI29234.3| unnamed protein product
           [Vitis vinifera]
          Length = 553

 Score =  110 bits (275), Expect = 1e-22
 Identities = 52/83 (62%), Positives = 67/83 (80%)
 Frame = +3

Query: 3   DFVDSQGRRLKLHFELRGTLLNIFSDMSSSITKGNLEPKSAMAADIVTVGNSWLSSSIKQ 182
           DF+ SQGRRL+L    RG+L +IFS++   ++KG +EPKSA+AADIVTVG+SWL  +I +
Sbjct: 172 DFMQSQGRRLRLLSNFRGSLQDIFSELCRPLSKGKIEPKSALAADIVTVGDSWLDLAINK 231

Query: 183 GIIEPIRDVELQDWFKGLSEKWK 251
           GIIEPI+ VE QDWF+GLS KWK
Sbjct: 232 GIIEPIQGVEDQDWFRGLSYKWK 254


>emb|CAN68081.1| hypothetical protein VITISV_021806 [Vitis vinifera]
          Length = 875

 Score =  110 bits (275), Expect = 1e-22
 Identities = 52/83 (62%), Positives = 67/83 (80%)
 Frame = +3

Query: 3   DFVDSQGRRLKLHFELRGTLLNIFSDMSSSITKGNLEPKSAMAADIVTVGNSWLSSSIKQ 182
           DF+ SQGRRL+L    RG+L +IFS++   ++KG +EPKSA+AADIVTVG+SWL  +I +
Sbjct: 480 DFMQSQGRRLRLLSNFRGSLQDIFSELCRPLSKGKIEPKSALAADIVTVGDSWLDLAINK 539

Query: 183 GIIEPIRDVELQDWFKGLSEKWK 251
           GIIEPI+ VE QDWF+GLS KWK
Sbjct: 540 GIIEPIQGVEDQDWFRGLSYKWK 562


>ref|XP_002304393.1| predicted protein [Populus trichocarpa] gi|222841825|gb|EEE79372.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score =  109 bits (272), Expect = 3e-22
 Identities = 51/83 (61%), Positives = 65/83 (78%)
 Frame = +3

Query: 3   DFVDSQGRRLKLHFELRGTLLNIFSDMSSSITKGNLEPKSAMAADIVTVGNSWLSSSIKQ 182
           DF+ SQGRRL+   +  G+L NIFSD+S+S  K N+ P S +A+DIV+VG+SWLS +IK 
Sbjct: 42  DFIQSQGRRLRFRVKYLGSLENIFSDISASFNKRNIGPMSTVASDIVSVGDSWLSFAIKN 101

Query: 183 GIIEPIRDVELQDWFKGLSEKWK 251
            IIEP+R VE QDWFKGLS+KWK
Sbjct: 102 AIIEPVRGVEEQDWFKGLSDKWK 124


>ref|XP_002448462.1| hypothetical protein SORBIDRAFT_06g027530 [Sorghum bicolor]
           gi|241939645|gb|EES12790.1| hypothetical protein
           SORBIDRAFT_06g027530 [Sorghum bicolor]
          Length = 531

 Score =  105 bits (262), Expect = 4e-21
 Identities = 47/83 (56%), Positives = 65/83 (78%)
 Frame = +3

Query: 3   DFVDSQGRRLKLHFELRGTLLNIFSDMSSSITKGNLEPKSAMAADIVTVGNSWLSSSIKQ 182
           DFV+ QG+RLK   ELR  L  IFS+MS  + KG ++PKSAMAAD VT+G+SWL  +I+Q
Sbjct: 155 DFVEVQGKRLKFSPELRANLDGIFSEMSQCMDKGQVQPKSAMAADAVTLGDSWLGYAIRQ 214

Query: 183 GIIEPIRDVELQDWFKGLSEKWK 251
           G++EP+++ E QDWF+ LS++WK
Sbjct: 215 GLLEPVKNAEEQDWFRSLSDRWK 237


>ref|NP_001146059.1| uncharacterized protein LOC100279590 [Zea mays]
           gi|219885513|gb|ACL53131.1| unknown [Zea mays]
           gi|413919418|gb|AFW59350.1| putative putrescine-binding
           domain family protein [Zea mays]
          Length = 530

 Score =  104 bits (259), Expect = 9e-21
 Identities = 46/83 (55%), Positives = 66/83 (79%)
 Frame = +3

Query: 3   DFVDSQGRRLKLHFELRGTLLNIFSDMSSSITKGNLEPKSAMAADIVTVGNSWLSSSIKQ 182
           DFV++QG+RLK   ELR  L  IFS+MS  + KG ++PKSAMAAD+V++G+SWL  +I++
Sbjct: 154 DFVEAQGKRLKFSPELRANLDGIFSEMSQCMDKGQVQPKSAMAADVVSLGDSWLGYAIRK 213

Query: 183 GIIEPIRDVELQDWFKGLSEKWK 251
           G++EPI++ E QDWF  LS++WK
Sbjct: 214 GLLEPIKNAEEQDWFHSLSDRWK 236


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