BLASTX nr result

ID: Coptis25_contig00017579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017579
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317508.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
ref|XP_002528572.1| hypothetical protein RCOM_1125920 [Ricinus c...    64   1e-08
emb|CBI20330.3| unnamed protein product [Vitis vinifera]               63   2e-08
ref|XP_002284821.1| PREDICTED: uncharacterized protein LOC100257...    63   2e-08
ref|XP_002284818.1| PREDICTED: uncharacterized protein LOC100257...    63   2e-08

>ref|XP_002317508.1| predicted protein [Populus trichocarpa] gi|222860573|gb|EEE98120.1|
           predicted protein [Populus trichocarpa]
          Length = 140

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 32/48 (66%), Positives = 38/48 (79%)
 Frame = -3

Query: 207 EETGPSETNLFRGKCIVDPNQTKAKEVKPIARLHKVLKFKFASDVETQ 64
           EETGPSE NLF G+CIVDPNQT  KEVKP+A+L K+LKF+   D + Q
Sbjct: 85  EETGPSEANLFAGRCIVDPNQTPTKEVKPVAQLQKILKFRLLMDEDVQ 132


>ref|XP_002528572.1| hypothetical protein RCOM_1125920 [Ricinus communis]
           gi|223532016|gb|EEF33827.1| hypothetical protein
           RCOM_1125920 [Ricinus communis]
          Length = 303

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/48 (60%), Positives = 35/48 (72%)
 Frame = -3

Query: 207 EETGPSETNLFRGKCIVDPNQTKAKEVKPIARLHKVLKFKFASDVETQ 64
           EETGPSE NLF G  I+DPNQ   K+VKP+ARL K+LKF+   D + Q
Sbjct: 78  EETGPSEANLFSGAYIIDPNQAPVKQVKPVARLQKILKFRVLLDNDVQ 125


>emb|CBI20330.3| unnamed protein product [Vitis vinifera]
          Length = 146

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/48 (60%), Positives = 35/48 (72%)
 Frame = -3

Query: 207 EETGPSETNLFRGKCIVDPNQTKAKEVKPIARLHKVLKFKFASDVETQ 64
           EETGPSE NLF G  I+DPNQ  AKEVKPIA L K+L+F+   + + Q
Sbjct: 90  EETGPSEANLFSGTFIIDPNQAPAKEVKPIASLQKILRFRLLHEGDVQ 137


>ref|XP_002284821.1| PREDICTED: uncharacterized protein LOC100257155 isoform 2 [Vitis
           vinifera]
          Length = 123

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/48 (60%), Positives = 35/48 (72%)
 Frame = -3

Query: 207 EETGPSETNLFRGKCIVDPNQTKAKEVKPIARLHKVLKFKFASDVETQ 64
           EETGPSE NLF G  I+DPNQ  AKEVKPIA L K+L+F+   + + Q
Sbjct: 67  EETGPSEANLFSGTFIIDPNQAPAKEVKPIASLQKILRFRLLHEGDVQ 114


>ref|XP_002284818.1| PREDICTED: uncharacterized protein LOC100257155 isoform 1 [Vitis
           vinifera]
          Length = 137

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/48 (60%), Positives = 35/48 (72%)
 Frame = -3

Query: 207 EETGPSETNLFRGKCIVDPNQTKAKEVKPIARLHKVLKFKFASDVETQ 64
           EETGPSE NLF G  I+DPNQ  AKEVKPIA L K+L+F+   + + Q
Sbjct: 81  EETGPSEANLFSGTFIIDPNQAPAKEVKPIASLQKILRFRLLHEGDVQ 128


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