BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017569
         (1386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19279.3| unnamed protein product [Vitis vinifera]              291   2e-76
ref|XP_002285663.1| PREDICTED: double-stranded RNA-binding prote...   291   2e-76
ref|XP_004163953.1| PREDICTED: double-stranded RNA-binding prote...   283   6e-74
ref|XP_004152741.1| PREDICTED: double-stranded RNA-binding prote...   280   5e-73
ref|XP_003523789.1| PREDICTED: double-stranded RNA-binding prote...   280   8e-73

>emb|CBI19279.3| unnamed protein product [Vitis vinifera]
          Length = 415

 Score =  291 bits (746), Expect = 2e-76
 Identities = 147/205 (71%), Positives = 172/205 (83%), Gaps = 1/205 (0%)
 Frame = -2

Query: 1283 MSITNGFAGVSNCYVFKSRLQEYAQKGALLSPVYETTKEGPSHEPSFRSTVTVNNVSYDS 1104
            MS  +GFAGVSNCYVFKSRLQEYAQK  L +P+Y+T KEGP H PSF+STV VN+V YDS
Sbjct: 1    MSSNDGFAGVSNCYVFKSRLQEYAQKVGLPTPLYDTIKEGPPHVPSFKSTVIVNDVRYDS 60

Query: 1103 LPGFSNRKAAEQSAAEVALMELTKSGNINKSISHPVQETGLCKNLLQEYAQKMNYAIPSY 924
            LPGFSNRKAAEQSAAEVAL+EL KSGN+ + IS PV ETGLCKNLLQEYAQKMNYAIP Y
Sbjct: 61   LPGFSNRKAAEQSAAEVALVELAKSGNMKECISQPVHETGLCKNLLQEYAQKMNYAIPMY 120

Query: 923  VCRKDDAPGRMSFYSCTVDIGGIQYIGAAARTKKEAEIKAARTALLAIQSNPNGAEAKRS 744
            VC+KD++PGR + +SCTV+IGGI+YIGAAARTKKEAEIKAARTALLAI++N +G   K  
Sbjct: 121  VCQKDESPGRAASFSCTVEIGGIRYIGAAARTKKEAEIKAARTALLAIRANTDGVGEKSI 180

Query: 743  GSCQLTVLPSKRE-PVIKKEEKPLK 672
            G+ QLTV+P K++ P     ++P K
Sbjct: 181  GNTQLTVIPGKKKGPESGNPDEPAK 205


>ref|XP_002285663.1| PREDICTED: double-stranded RNA-binding protein 1 [Vitis vinifera]
            gi|147781065|emb|CAN68128.1| hypothetical protein
            VITISV_043706 [Vitis vinifera]
          Length = 400

 Score =  291 bits (746), Expect = 2e-76
 Identities = 147/205 (71%), Positives = 172/205 (83%), Gaps = 1/205 (0%)
 Frame = -2

Query: 1283 MSITNGFAGVSNCYVFKSRLQEYAQKGALLSPVYETTKEGPSHEPSFRSTVTVNNVSYDS 1104
            MS  +GFAGVSNCYVFKSRLQEYAQK  L +P+Y+T KEGP H PSF+STV VN+V YDS
Sbjct: 1    MSSNDGFAGVSNCYVFKSRLQEYAQKVGLPTPLYDTIKEGPPHVPSFKSTVIVNDVRYDS 60

Query: 1103 LPGFSNRKAAEQSAAEVALMELTKSGNINKSISHPVQETGLCKNLLQEYAQKMNYAIPSY 924
            LPGFSNRKAAEQSAAEVAL+EL KSGN+ + IS PV ETGLCKNLLQEYAQKMNYAIP Y
Sbjct: 61   LPGFSNRKAAEQSAAEVALVELAKSGNMKECISQPVHETGLCKNLLQEYAQKMNYAIPMY 120

Query: 923  VCRKDDAPGRMSFYSCTVDIGGIQYIGAAARTKKEAEIKAARTALLAIQSNPNGAEAKRS 744
            VC+KD++PGR + +SCTV+IGGI+YIGAAARTKKEAEIKAARTALLAI++N +G   K  
Sbjct: 121  VCQKDESPGRAASFSCTVEIGGIRYIGAAARTKKEAEIKAARTALLAIRANTDGVGEKSI 180

Query: 743  GSCQLTVLPSKRE-PVIKKEEKPLK 672
            G+ QLTV+P K++ P     ++P K
Sbjct: 181  GNTQLTVIPGKKKGPESGNPDEPAK 205


>ref|XP_004163953.1| PREDICTED: double-stranded RNA-binding protein 1-like [Cucumis
            sativus]
          Length = 351

 Score =  283 bits (725), Expect = 6e-74
 Identities = 146/203 (71%), Positives = 162/203 (79%), Gaps = 1/203 (0%)
 Frame = -2

Query: 1283 MSITNGFAGVSNCYVFKSRLQEYAQKGALLSPVYETTKEGPSHEPSFRSTVTVNNVSYDS 1104
            M   + F GVSNCYVFKSRLQEYAQK  L +PVYET KEGPSHEP+F STV VN+V YDS
Sbjct: 1    MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDS 60

Query: 1103 LPGFSNRKAAEQSAAEVALMELTKSGNINKSISHPVQETGLCKNLLQEYAQKMNYAIPSY 924
            LPGFSNRKAAEQSAAEVALMEL+KS ++N  +S PV ETGLCKNLLQEYAQKMN+AIP Y
Sbjct: 61   LPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLY 120

Query: 923  VCRKDDAPGRMSFYSCTVDIGGIQYIGAAARTKKEAEIKAARTALLAIQSNPNGAEAKRS 744
             C+KDD PGR S +SCTV+IGGI+YIGA A+TKKEAEIKAARTALLAIQS PN    K  
Sbjct: 121  QCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSEKSV 180

Query: 743  GSCQLTVLPS-KREPVIKKEEKP 678
               QLTV+PS KR+       KP
Sbjct: 181  NQVQLTVIPSCKRKEAADCSVKP 203


>ref|XP_004152741.1| PREDICTED: double-stranded RNA-binding protein 1-like [Cucumis
            sativus]
          Length = 344

 Score =  280 bits (717), Expect = 5e-73
 Identities = 144/195 (73%), Positives = 159/195 (81%), Gaps = 1/195 (0%)
 Frame = -2

Query: 1259 GVSNCYVFKSRLQEYAQKGALLSPVYETTKEGPSHEPSFRSTVTVNNVSYDSLPGFSNRK 1080
            GVSNCYVFKSRLQEYAQK  L +PVYET KEGPSHEP+F STV VN+V YDSLPGFSNRK
Sbjct: 2    GVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYDSLPGFSNRK 61

Query: 1079 AAEQSAAEVALMELTKSGNINKSISHPVQETGLCKNLLQEYAQKMNYAIPSYVCRKDDAP 900
            AAEQSAAEVALMEL+KS ++N  +S PV ETGLCKNLLQEYAQKMN+AIP Y C+KDD P
Sbjct: 62   AAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGP 121

Query: 899  GRMSFYSCTVDIGGIQYIGAAARTKKEAEIKAARTALLAIQSNPNGAEAKRSGSCQLTVL 720
            GR S +SCTV+IGGI+YIGA A+TKKEAEIKAARTALLAIQS PN    K     QLTV+
Sbjct: 122  GRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSEKSVNQVQLTVI 181

Query: 719  PS-KREPVIKKEEKP 678
            PS KR+       KP
Sbjct: 182  PSCKRKEAADCSVKP 196


>ref|XP_003523789.1| PREDICTED: double-stranded RNA-binding protein 1-like [Glycine max]
          Length = 359

 Score =  280 bits (715), Expect = 8e-73
 Identities = 144/210 (68%), Positives = 162/210 (77%), Gaps = 5/210 (2%)
 Frame = -2

Query: 1283 MSITNGFAGVSNCYVFKSRLQEYAQKGALLSPVYETTKEGPSHEPSFRSTVTVNNVSYDS 1104
            M     F  VSNCYVFKSRLQEYAQK  L +PVYET KEGPSHEPSFRSTV VN+V YDS
Sbjct: 1    MPTNEDFQSVSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDVRYDS 60

Query: 1103 LPGFSNRKAAEQSAAEVALMELTKSGNINKSISHPVQETGLCKNLLQEYAQKMNYAIPSY 924
            LPGF NRKAAEQSAAEVAL+EL KS  +N+SI+ PV ETGLCKNLLQEYAQKMNYA+P Y
Sbjct: 61   LPGFFNRKAAEQSAAEVALVELVKSNAVNQSITQPVHETGLCKNLLQEYAQKMNYAMPMY 120

Query: 923  VCRKDDAPGRMSFYSCTVDIGGIQYIGAAARTKKEAEIKAARTALLAIQSNPNGAEAKRS 744
             C+KD+ PGR S +SCTVDIGGI YIG AA+TKKEAEIKAARTALLAIQS+ + A   + 
Sbjct: 121  QCKKDETPGRASVFSCTVDIGGILYIGGAAKTKKEAEIKAARTALLAIQSSASHASENQV 180

Query: 743  GSCQLTVLPSKRE-----PVIKKEEKPLKP 669
            G  QLTVLP ++       +  +   P KP
Sbjct: 181  GHPQLTVLPCRKRATSSVAIADENSNPPKP 210