BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017555
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc...   255   5e-66
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]   253   2e-65
ref|NP_001061583.1| Os08g0338200 [Oryza sativa Japonica Group] g...   226   2e-57
gb|EEC83408.1| hypothetical protein OsI_28861 [Oryza sativa Indi...   226   2e-57
dbj|BAK04994.1| predicted protein [Hordeum vulgare subsp. vulgare]    223   2e-56

>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 [Vitis vinifera]
           gi|296090002|emb|CBI39821.3| unnamed protein product
           [Vitis vinifera]
          Length = 602

 Score =  255 bits (651), Expect = 5e-66
 Identities = 129/194 (66%), Positives = 151/194 (77%), Gaps = 2/194 (1%)
 Frame = +1

Query: 1   DVRPLTDGRSNKVTFNLTPEIIHQIFAEKPTVHKAYLNFVPRKMSEMDFWTKYCRPEYLL 180
           D++PLTDGR+N+VTFNLTPEIIHQIFAEKP VH+A+LNFVP KM+E DFW KYCR EYL 
Sbjct: 188 DLKPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLH 247

Query: 181 RTRNXXXXXXXXXXXXXXX-FLKHDEILANEAHRKLRRVDPILDMEADQGDDYMHLQDHG 357
            TRN                FLKHD+ILANEA RK+RRVDP LDMEADQGDDYMHL DHG
Sbjct: 248 CTRNTVAAAAEAAEDEELAVFLKHDDILANEARRKIRRVDPTLDMEADQGDDYMHLPDHG 307

Query: 358 ILCDG*KEAIDSEYDEHKRTLSQNFNQHAAVVLEGRALDVALGDTRTVAEALSRSKQAEL 537
           I  DG KE ID +Y++++RTLSQ+ N+HAAVVLEGR +DV L DTRTVAEAL++SK+ E 
Sbjct: 308 IFRDGSKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSKRVEA 367

Query: 538 A-ENLDKNVARARI 576
           A E  D +V R R+
Sbjct: 368 ANEKSDGSVTRERL 381


>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
          Length = 735

 Score =  253 bits (646), Expect = 2e-65
 Identities = 128/194 (65%), Positives = 151/194 (77%), Gaps = 2/194 (1%)
 Frame = +1

Query: 1   DVRPLTDGRSNKVTFNLTPEIIHQIFAEKPTVHKAYLNFVPRKMSEMDFWTKYCRPEYLL 180
           D++PLTDGR+N+VTFNLTPEIIHQIFAEKP VH+A+LNFVP KM+E DFW KYCR EYL 
Sbjct: 231 DLKPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLH 290

Query: 181 RTRNXXXXXXXXXXXXXXX-FLKHDEILANEAHRKLRRVDPILDMEADQGDDYMHLQDHG 357
            TRN                FLKHD+ILA+EA RK+RRVDP LDMEADQGDDYMHL DHG
Sbjct: 291 CTRNTVAAAAEAAEDEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYMHLPDHG 350

Query: 358 ILCDG*KEAIDSEYDEHKRTLSQNFNQHAAVVLEGRALDVALGDTRTVAEALSRSKQAEL 537
           I  DG KE ID +Y++++RTLSQ+ N+HAAVVLEGR +DV L DTRTVAEAL++SK+ E 
Sbjct: 351 IFRDGSKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSKRVEA 410

Query: 538 A-ENLDKNVARARI 576
           A E  D +V R R+
Sbjct: 411 ANEKSDGSVTRERL 424


>ref|NP_001061583.1| Os08g0338200 [Oryza sativa Japonica Group]
           gi|38636938|dbj|BAD03200.1| unknown protein [Oryza
           sativa Japonica Group] gi|113623552|dbj|BAF23497.1|
           Os08g0338200 [Oryza sativa Japonica Group]
           gi|215686948|dbj|BAG90767.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 604

 Score =  226 bits (576), Expect = 2e-57
 Identities = 115/193 (59%), Positives = 144/193 (74%), Gaps = 1/193 (0%)
 Frame = +1

Query: 1   DVRPLTDGRSNKVTFNLTPEIIHQIFAEKPTVHKAYLNFVPRKMSEMDFWTKYCRPEYLL 180
           DVRP  DGR+NKVTF+LT EIIHQIFAEKP VH+A+L+FVP+KMSE DFWTKY R EYLL
Sbjct: 193 DVRPSADGRTNKVTFSLTTEIIHQIFAEKPAVHRAFLDFVPKKMSEKDFWTKYFRAEYLL 252

Query: 181 RTRNXXXXXXXXXXXXXXX-FLKHDEILANEAHRKLRRVDPILDMEADQGDDYMHLQDHG 357
           RT+N                FLK+D+ILA EA  K++RVDP LDMEAD GDDY+HL DHG
Sbjct: 253 RTKNTVAATAEAAEDEELAIFLKNDDILAKEARLKIKRVDPTLDMEADAGDDYIHLPDHG 312

Query: 358 ILCDG*KEAIDSEYDEHKRTLSQNFNQHAAVVLEGRALDVALGDTRTVAEALSRSKQAEL 537
           I+ DG KE ID++ +  +RTLSQ+ N+HAAVVLEGR+ DV L DT+TVAEA++RSK+   
Sbjct: 313 IIRDGSKETIDNDGELARRTLSQDLNRHAAVVLEGRSSDVELTDTKTVAEAIARSKKEPP 372

Query: 538 AENLDKNVARARI 576
           + ++  +    R+
Sbjct: 373 SSSISDDTNHERL 385


>gb|EEC83408.1| hypothetical protein OsI_28861 [Oryza sativa Indica Group]
           gi|222640385|gb|EEE68517.1| hypothetical protein
           OsJ_26954 [Oryza sativa Japonica Group]
          Length = 625

 Score =  226 bits (576), Expect = 2e-57
 Identities = 115/193 (59%), Positives = 144/193 (74%), Gaps = 1/193 (0%)
 Frame = +1

Query: 1   DVRPLTDGRSNKVTFNLTPEIIHQIFAEKPTVHKAYLNFVPRKMSEMDFWTKYCRPEYLL 180
           DVRP  DGR+NKVTF+LT EIIHQIFAEKP VH+A+L+FVP+KMSE DFWTKY R EYLL
Sbjct: 193 DVRPSADGRTNKVTFSLTTEIIHQIFAEKPAVHRAFLDFVPKKMSEKDFWTKYFRAEYLL 252

Query: 181 RTRNXXXXXXXXXXXXXXX-FLKHDEILANEAHRKLRRVDPILDMEADQGDDYMHLQDHG 357
           RT+N                FLK+D+ILA EA  K++RVDP LDMEAD GDDY+HL DHG
Sbjct: 253 RTKNTVAATAEAAEDEELAIFLKNDDILAKEARLKIKRVDPTLDMEADAGDDYIHLPDHG 312

Query: 358 ILCDG*KEAIDSEYDEHKRTLSQNFNQHAAVVLEGRALDVALGDTRTVAEALSRSKQAEL 537
           I+ DG KE ID++ +  +RTLSQ+ N+HAAVVLEGR+ DV L DT+TVAEA++RSK+   
Sbjct: 313 IIRDGSKETIDNDGELARRTLSQDLNRHAAVVLEGRSSDVELTDTKTVAEAIARSKKEPP 372

Query: 538 AENLDKNVARARI 576
           + ++  +    R+
Sbjct: 373 SSSISDDTNHERL 385


>dbj|BAK04994.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 596

 Score =  223 bits (567), Expect = 2e-56
 Identities = 112/196 (57%), Positives = 144/196 (73%), Gaps = 1/196 (0%)
 Frame = +1

Query: 1   DVRPLTDGRSNKVTFNLTPEIIHQIFAEKPTVHKAYLNFVPRKMSEMDFWTKYCRPEYLL 180
           DVRP  DG++NKVTF+LT EIIHQIFAEKP VH+A+L++VP+K+SE DFWTKYCR EYLL
Sbjct: 189 DVRPSADGQTNKVTFSLTTEIIHQIFAEKPAVHRAFLDYVPKKLSEKDFWTKYCRAEYLL 248

Query: 181 RTRNXXXXXXXXXXXXXXX-FLKHDEILANEAHRKLRRVDPILDMEADQGDDYMHLQDHG 357
           RT+N                FLK+D+ILA EA  K++RVDP LDMEAD GDDY+HL DHG
Sbjct: 249 RTKNTLAAKAEAAEDEELAMFLKNDDILAKEAKLKIKRVDPTLDMEADAGDDYIHLPDHG 308

Query: 358 ILCDG*KEAIDSEYDEHKRTLSQNFNQHAAVVLEGRALDVALGDTRTVAEALSRSKQAEL 537
           IL DG +E  D++ +  +RTLSQ+ N+HAAVVLEGR+ D+   DT+TVAEAL+RSK+   
Sbjct: 309 ILRDGSRETTDTDSELARRTLSQDLNRHAAVVLEGRSADIESTDTKTVAEALARSKKEPP 368

Query: 538 AENLDKNVARARITGA 585
             ++  + +  R+  A
Sbjct: 369 PSSVADDASHERLVKA 384