BLASTX nr result

ID: Coptis25_contig00017494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017494
         (773 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263076.1| PREDICTED: protein HIRA [Vitis vinifera] gi|...   163   3e-38
ref|XP_003541974.1| PREDICTED: protein HIRA-like [Glycine max]        157   2e-36
ref|XP_003540239.1| PREDICTED: protein HIRA-like [Glycine max]        155   1e-35
ref|XP_004149254.1| PREDICTED: protein HIRA-like [Cucumis sativus]    152   1e-34
ref|XP_003596786.1| Histone transcription regulator HIRA [Medica...   146   4e-33

>ref|XP_002263076.1| PREDICTED: protein HIRA [Vitis vinifera] gi|296084943|emb|CBI28352.3|
            unnamed protein product [Vitis vinifera]
          Length = 1036

 Score =  163 bits (413), Expect = 3e-38
 Identities = 93/165 (56%), Positives = 106/165 (64%), Gaps = 25/165 (15%)
 Frame = +3

Query: 3    YIRFLAREADESRLREVCESFLGPPAGMIVSISSDPTNLTWDPCVLGMKKQKLLREDILP 182
            YIRFLAREADESRLREVCESFLGPP GM+ +I SDP N  WDPCVLGMKK KLLREDILP
Sbjct: 870  YIRFLAREADESRLREVCESFLGPPTGMVEAIPSDPKNPAWDPCVLGMKKHKLLREDILP 929

Query: 183  AMASNRKVQRLLNEFINLLSEYECNEPNLDQVTPN---------------PSTIEHVEST 317
            AMASNRKVQRLLNEF++LLSEYE  E N D   P                PST E ++S 
Sbjct: 930  AMASNRKVQRLLNEFMDLLSEYESAESNQDSKNPKQPKSALPASDQVDFAPST-EQMDSM 988

Query: 318  KLATDQV----------NPNPTAIDQVESTKLGTDIEHSTQPPEE 422
              ATDQ+          + +P   D+V+S    TD +    P E+
Sbjct: 989  PPATDQMDLGEPASVKADSSPATTDKVKSDPSATDQKTQVPPAED 1033


>ref|XP_003541974.1| PREDICTED: protein HIRA-like [Glycine max]
          Length = 1047

 Score =  157 bits (398), Expect = 2e-36
 Identities = 89/159 (55%), Positives = 108/159 (67%), Gaps = 6/159 (3%)
 Frame = +3

Query: 3    YIRFLAREADESRLREVCESFLGPPAGMIVSISSDPTNLTWDPCVLGMKKQKLLREDILP 182
            Y+RFLAREADESRLREVCESFLGPP GM+   SSD  NL WDP VLGM+K KLLREDILP
Sbjct: 883  YVRFLAREADESRLREVCESFLGPPTGMVEETSSDSKNLAWDPMVLGMRKHKLLREDILP 942

Query: 183  AMASNRKVQRLLNEFINLLSEYECNEPNLDQ---VTPNPSTIE--HVESTKLATDQVNPN 347
            +MASNRKVQRLLNEF++LLSEYE  + N +Q     PN S  E   +ES+ LATDQ +  
Sbjct: 943  SMASNRKVQRLLNEFMDLLSEYEIIDANQEQSNPTVPNSSLPETNPIESSSLATDQEHTA 1002

Query: 348  PTAIDQVESTKLGTDIEHSTQPPEELVD-PASLTQDTGS 461
            P  +D            H+T   +E ++ P +LT +  +
Sbjct: 1003 PPKLD------------HNTPLEKEQINFPPALTDEASA 1029


>ref|XP_003540239.1| PREDICTED: protein HIRA-like [Glycine max]
          Length = 1031

 Score =  155 bits (391), Expect = 1e-35
 Identities = 86/149 (57%), Positives = 100/149 (67%)
 Frame = +3

Query: 3    YIRFLAREADESRLREVCESFLGPPAGMIVSISSDPTNLTWDPCVLGMKKQKLLREDILP 182
            Y+RFLAREADESRLREVCESFLGPP GM+   SSD  NL WDP VLGM+K KLLREDILP
Sbjct: 867  YVRFLAREADESRLREVCESFLGPPTGMVEETSSDSKNLAWDPFVLGMRKHKLLREDILP 926

Query: 183  AMASNRKVQRLLNEFINLLSEYECNEPNLDQVTPNPSTIEHVESTKLATDQVNPNPTAID 362
            +MASNRKVQRLLNEF++LLSEYE  + N +Q  P       V ++ L   + NP      
Sbjct: 927  SMASNRKVQRLLNEFMDLLSEYEIIDANQEQTNPT------VPNSSLP--ETNP------ 972

Query: 363  QVESTKLGTDIEHSTQPPEELVDPASLTQ 449
             +ES+ L TD EH+  P  E   P    Q
Sbjct: 973  -IESSSLATDREHTAPPKLEHNTPLEKEQ 1000


>ref|XP_004149254.1| PREDICTED: protein HIRA-like [Cucumis sativus]
          Length = 1033

 Score =  152 bits (383), Expect = 1e-34
 Identities = 86/148 (58%), Positives = 100/148 (67%), Gaps = 5/148 (3%)
 Frame = +3

Query: 3    YIRFLAREADESRLREVCESFLGPPAGMIVSISSDPTNLTWDPCVLGMKKQKLLREDILP 182
            YIRFLAREADESRLREVCES LGPP GM     +D  N  WDPCVLGM+K KLLREDILP
Sbjct: 873  YIRFLAREADESRLREVCESLLGPPTGMAGDALADSKNQAWDPCVLGMRKHKLLREDILP 932

Query: 183  AMASNRKVQRLLNEFINLLSEYECNEPNLDQVTPNPSTI-----EHVESTKLATDQVNPN 347
            AMASNRKVQRLLNEF++LLSEYE NE N+D     P++      +H  S     D++  +
Sbjct: 933  AMASNRKVQRLLNEFMDLLSEYENNENNIDPKASLPASSSLLEPDHEHSAPQQADKMETD 992

Query: 348  PTAIDQVESTKLGTDIEHSTQPPEELVD 431
            PT  D   S++L  D + S  PP   VD
Sbjct: 993  PTLKD---SSELVID-QTSLAPPVAPVD 1016


>ref|XP_003596786.1| Histone transcription regulator HIRA [Medicago truncatula]
            gi|355485834|gb|AES67037.1| Histone transcription
            regulator HIRA [Medicago truncatula]
          Length = 992

 Score =  146 bits (369), Expect = 4e-33
 Identities = 77/129 (59%), Positives = 93/129 (72%)
 Frame = +3

Query: 3    YIRFLAREADESRLREVCESFLGPPAGMIVSISSDPTNLTWDPCVLGMKKQKLLREDILP 182
            Y+RFLAREADESRLREVCE FLGPP GM    SSD  NL WDP VLGM+K KLLREDILP
Sbjct: 867  YVRFLAREADESRLREVCEGFLGPPTGMAEEPSSDSNNLAWDPFVLGMRKHKLLREDILP 926

Query: 183  AMASNRKVQRLLNEFINLLSEYECNEPNLDQVTPNPSTIEHVESTKLATDQVNPNPTAID 362
            +MASNRKVQRLLNEF++LLSE+E  +PN DQ+      +   +S+  AT  +  +  AID
Sbjct: 927  SMASNRKVQRLLNEFMDLLSEFEIVDPNQDQM-----ALVLPKSSSPATKLIENSSVAID 981

Query: 363  QVESTKLGT 389
            + +  +  T
Sbjct: 982  KEDGAQAKT 990


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