BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017493
         (1480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic su...   844   0.0  
ref|NP_001067405.1| Os11g0186400 [Oryza sativa Japonica Group] g...   830   0.0  
gb|EEE51779.1| hypothetical protein OsJ_33228 [Oryza sativa Japo...   830   0.0  
gb|EEC67820.1| hypothetical protein OsI_35398 [Oryza sativa Indi...   830   0.0  
gb|AAY23282.1| Similar to dna polymerase delta catalytic subunit...   830   0.0  

>ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic subunit [Vitis vinifera]
            gi|296088521|emb|CBI37512.3| unnamed protein product
            [Vitis vinifera]
          Length = 1089

 Score =  844 bits (2180), Expect = 0.0
 Identities = 428/493 (86%), Positives = 448/493 (90%)
 Frame = +1

Query: 1    VEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPSVKKQGSGDNTFEGATVLEAK 180
            VEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLV+P+VK+ GS   T+EGATVLEA 
Sbjct: 521  VEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVLPNVKQAGSEQGTYEGATVLEAN 580

Query: 181  TGFYEKPIATLDFASLYPSIMMAYNLCYCSLVTPEDVRKFNLPPECVNKTPSGETFVKSN 360
             GFYEKPIATLDFASLYPSIMMAYNLCYC+LVTPEDVRK NLPPECVNKTPSGE FVKS+
Sbjct: 581  AGFYEKPIATLDFASLYPSIMMAYNLCYCTLVTPEDVRKLNLPPECVNKTPSGEIFVKSS 640

Query: 361  LQKGXXXXXXXXXXXXXXXXXXXXXXXXXPLEKAVLDGRQLALKISANSVYGFTGATVGQ 540
            LQKG                         PLEKAVLDGRQLALKISANSVYGFTGATVGQ
Sbjct: 641  LQKGILPEILEELLAARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQ 700

Query: 541  LPCLEISSSVTSYGRQMIEHTKKLVEERFNTLGGYEHNAEVIYGDTDSVMVQFGVPTVGA 720
            LPC+EISSSVTSYGRQMIEHTKKLVEE+F TLGGYEHNAEVIYGDTDSVMV FGV TV A
Sbjct: 701  LPCIEISSSVTSYGRQMIEHTKKLVEEKFTTLGGYEHNAEVIYGDTDSVMVLFGVSTVEA 760

Query: 721  AMNLGREAAEYISATFIKPIKLEFEKVYHPYLLISKKRYAGLFWTNPDKFDKMDTKGIET 900
            AMNLGREAAEYIS TF+KPIKLEFEKVY+PYLLISKKRYAGL WTNPDKFDKMDTKGIET
Sbjct: 761  AMNLGREAAEYISGTFMKPIKLEFEKVYYPYLLISKKRYAGLLWTNPDKFDKMDTKGIET 820

Query: 901  VRRDNCLLVKNLVNECLHKILIDRDIPGAVQYVKNTISDLLMNRMDLSLLVITKGLTKTG 1080
            VRRDNCLLVKNLV ECLHKILIDRDIPGAVQYVKNTI+DLLMNRMDLSLLVITKGLTKTG
Sbjct: 821  VRRDNCLLVKNLVKECLHKILIDRDIPGAVQYVKNTIADLLMNRMDLSLLVITKGLTKTG 880

Query: 1081 EDYANKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYEKSEDPIYVLENNIP 1260
            +DY  KAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYE+SEDPIYVLENNIP
Sbjct: 881  DDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIP 940

Query: 1261 IDAQYYLENQISKPLLRLFDPILKNASSELLHGSHTRAVSISTPSNSGIMKFAKKQLSCL 1440
            ID QYYLENQISKPLLR+F+PILKNAS ELLHGSHTR++SISTPSNSGIMKFAKKQLSC+
Sbjct: 941  IDPQYYLENQISKPLLRIFEPILKNASKELLHGSHTRSISISTPSNSGIMKFAKKQLSCI 1000

Query: 1441 GCKALISNAEQTL 1479
            GCKALISN ++TL
Sbjct: 1001 GCKALISNTDRTL 1013


>ref|NP_001067405.1| Os11g0186400 [Oryza sativa Japonica Group]
            gi|13124219|sp|Q9LRE6.1|DPOD1_ORYSJ RecName: Full=DNA
            polymerase delta catalytic subunit
            gi|9188570|dbj|BAA99573.1| OsPol delta large subunit
            [Oryza sativa Japonica Group] gi|62734232|gb|AAX96341.1|
            dna polymerase delta catalytic subunit (ec 2.7.7.7)
            [Oryza sativa Japonica Group] gi|77549018|gb|ABA91815.1|
            DNA polymerase delta catalytic subunit, putative,
            expressed [Oryza sativa Japonica Group]
            gi|113644627|dbj|BAF27768.1| Os11g0186400 [Oryza sativa
            Japonica Group]
          Length = 1105

 Score =  830 bits (2144), Expect = 0.0
 Identities = 420/493 (85%), Positives = 444/493 (90%)
 Frame = +1

Query: 1    VEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPSVKKQGSGDNTFEGATVLEAK 180
            VEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIP++K Q SG +TFEGATVLEA+
Sbjct: 537  VEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNIKGQASGQDTFEGATVLEAR 596

Query: 181  TGFYEKPIATLDFASLYPSIMMAYNLCYCSLVTPEDVRKFNLPPECVNKTPSGETFVKSN 360
             GFYEKPIATLDFASLYPSIMMAYNLCYC+LV PED RK NLPPE VNKTPSGETFVK +
Sbjct: 597  AGFYEKPIATLDFASLYPSIMMAYNLCYCTLVPPEDARKLNLPPESVNKTPSGETFVKPD 656

Query: 361  LQKGXXXXXXXXXXXXXXXXXXXXXXXXXPLEKAVLDGRQLALKISANSVYGFTGATVGQ 540
            +QKG                         P E+AVLDGRQLALKISANSVYGFTGATVGQ
Sbjct: 657  VQKGILPEILEELLAARKRAKADLKEAKDPFERAVLDGRQLALKISANSVYGFTGATVGQ 716

Query: 541  LPCLEISSSVTSYGRQMIEHTKKLVEERFNTLGGYEHNAEVIYGDTDSVMVQFGVPTVGA 720
            LPCLEISSSVTSYGRQMIEHTKKLVE++F TLGGYEHNAEVIYGDTDSVMVQFGV TV  
Sbjct: 717  LPCLEISSSVTSYGRQMIEHTKKLVEDKFTTLGGYEHNAEVIYGDTDSVMVQFGVSTVED 776

Query: 721  AMNLGREAAEYISATFIKPIKLEFEKVYHPYLLISKKRYAGLFWTNPDKFDKMDTKGIET 900
            AM LGREAA+YIS TFIKPIKLEFEK+Y PYLLISKKRYAGL+WTNP+KFDKMDTKGIET
Sbjct: 777  AMKLGREAADYISGTFIKPIKLEFEKIYFPYLLISKKRYAGLYWTNPEKFDKMDTKGIET 836

Query: 901  VRRDNCLLVKNLVNECLHKILIDRDIPGAVQYVKNTISDLLMNRMDLSLLVITKGLTKTG 1080
            VRRDNCLLVKNLV ECLHKIL+DRD+PGAVQYVKNTISDLLMNR+DLSLLVITKGLTKTG
Sbjct: 837  VRRDNCLLVKNLVTECLHKILVDRDVPGAVQYVKNTISDLLMNRVDLSLLVITKGLTKTG 896

Query: 1081 EDYANKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYEKSEDPIYVLENNIP 1260
            EDYA KAAHVELAERMRKRDAATAP VGDRVPYVIIKAAKGAKAYE+SEDPIYVL+NNIP
Sbjct: 897  EDYAVKAAHVELAERMRKRDAATAPTVGDRVPYVIIKAAKGAKAYERSEDPIYVLDNNIP 956

Query: 1261 IDAQYYLENQISKPLLRLFDPILKNASSELLHGSHTRAVSISTPSNSGIMKFAKKQLSCL 1440
            ID QYYLENQISKPLLR+F+PILKNAS ELLHGSHTRAVSISTPSNSGIMKFAKKQL+CL
Sbjct: 957  IDPQYYLENQISKPLLRIFEPILKNASRELLHGSHTRAVSISTPSNSGIMKFAKKQLTCL 1016

Query: 1441 GCKALISNAEQTL 1479
            GCKA+IS + QTL
Sbjct: 1017 GCKAVISGSNQTL 1029


>gb|EEE51779.1| hypothetical protein OsJ_33228 [Oryza sativa Japonica Group]
          Length = 1100

 Score =  830 bits (2144), Expect = 0.0
 Identities = 420/493 (85%), Positives = 444/493 (90%)
 Frame = +1

Query: 1    VEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPSVKKQGSGDNTFEGATVLEAK 180
            VEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIP++K Q SG +TFEGATVLEA+
Sbjct: 532  VEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNIKGQASGQDTFEGATVLEAR 591

Query: 181  TGFYEKPIATLDFASLYPSIMMAYNLCYCSLVTPEDVRKFNLPPECVNKTPSGETFVKSN 360
             GFYEKPIATLDFASLYPSIMMAYNLCYC+LV PED RK NLPPE VNKTPSGETFVK +
Sbjct: 592  AGFYEKPIATLDFASLYPSIMMAYNLCYCTLVPPEDARKLNLPPESVNKTPSGETFVKPD 651

Query: 361  LQKGXXXXXXXXXXXXXXXXXXXXXXXXXPLEKAVLDGRQLALKISANSVYGFTGATVGQ 540
            +QKG                         P E+AVLDGRQLALKISANSVYGFTGATVGQ
Sbjct: 652  VQKGILPEILEELLAARKRAKADLKEAKDPFERAVLDGRQLALKISANSVYGFTGATVGQ 711

Query: 541  LPCLEISSSVTSYGRQMIEHTKKLVEERFNTLGGYEHNAEVIYGDTDSVMVQFGVPTVGA 720
            LPCLEISSSVTSYGRQMIEHTKKLVE++F TLGGYEHNAEVIYGDTDSVMVQFGV TV  
Sbjct: 712  LPCLEISSSVTSYGRQMIEHTKKLVEDKFTTLGGYEHNAEVIYGDTDSVMVQFGVSTVED 771

Query: 721  AMNLGREAAEYISATFIKPIKLEFEKVYHPYLLISKKRYAGLFWTNPDKFDKMDTKGIET 900
            AM LGREAA+YIS TFIKPIKLEFEK+Y PYLLISKKRYAGL+WTNP+KFDKMDTKGIET
Sbjct: 772  AMKLGREAADYISGTFIKPIKLEFEKIYFPYLLISKKRYAGLYWTNPEKFDKMDTKGIET 831

Query: 901  VRRDNCLLVKNLVNECLHKILIDRDIPGAVQYVKNTISDLLMNRMDLSLLVITKGLTKTG 1080
            VRRDNCLLVKNLV ECLHKIL+DRD+PGAVQYVKNTISDLLMNR+DLSLLVITKGLTKTG
Sbjct: 832  VRRDNCLLVKNLVTECLHKILVDRDVPGAVQYVKNTISDLLMNRVDLSLLVITKGLTKTG 891

Query: 1081 EDYANKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYEKSEDPIYVLENNIP 1260
            EDYA KAAHVELAERMRKRDAATAP VGDRVPYVIIKAAKGAKAYE+SEDPIYVL+NNIP
Sbjct: 892  EDYAVKAAHVELAERMRKRDAATAPTVGDRVPYVIIKAAKGAKAYERSEDPIYVLDNNIP 951

Query: 1261 IDAQYYLENQISKPLLRLFDPILKNASSELLHGSHTRAVSISTPSNSGIMKFAKKQLSCL 1440
            ID QYYLENQISKPLLR+F+PILKNAS ELLHGSHTRAVSISTPSNSGIMKFAKKQL+CL
Sbjct: 952  IDPQYYLENQISKPLLRIFEPILKNASRELLHGSHTRAVSISTPSNSGIMKFAKKQLTCL 1011

Query: 1441 GCKALISNAEQTL 1479
            GCKA+IS + QTL
Sbjct: 1012 GCKAVISGSNQTL 1024


>gb|EEC67820.1| hypothetical protein OsI_35398 [Oryza sativa Indica Group]
          Length = 1087

 Score =  830 bits (2144), Expect = 0.0
 Identities = 420/493 (85%), Positives = 444/493 (90%)
 Frame = +1

Query: 1    VEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPSVKKQGSGDNTFEGATVLEAK 180
            VEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIP++K Q SG +TFEGATVLEA+
Sbjct: 519  VEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNIKGQASGQDTFEGATVLEAR 578

Query: 181  TGFYEKPIATLDFASLYPSIMMAYNLCYCSLVTPEDVRKFNLPPECVNKTPSGETFVKSN 360
             GFYEKPIATLDFASLYPSIMMAYNLCYC+LV PED RK NLPPE VNKTPSGETFVK +
Sbjct: 579  AGFYEKPIATLDFASLYPSIMMAYNLCYCTLVPPEDARKLNLPPESVNKTPSGETFVKPD 638

Query: 361  LQKGXXXXXXXXXXXXXXXXXXXXXXXXXPLEKAVLDGRQLALKISANSVYGFTGATVGQ 540
            +QKG                         P E+AVLDGRQLALKISANSVYGFTGATVGQ
Sbjct: 639  VQKGILPEILEELLAARKRAKADLKEAKDPFERAVLDGRQLALKISANSVYGFTGATVGQ 698

Query: 541  LPCLEISSSVTSYGRQMIEHTKKLVEERFNTLGGYEHNAEVIYGDTDSVMVQFGVPTVGA 720
            LPCLEISSSVTSYGRQMIEHTKKLVE++F TLGGYEHNAEVIYGDTDSVMVQFGV TV  
Sbjct: 699  LPCLEISSSVTSYGRQMIEHTKKLVEDKFTTLGGYEHNAEVIYGDTDSVMVQFGVSTVED 758

Query: 721  AMNLGREAAEYISATFIKPIKLEFEKVYHPYLLISKKRYAGLFWTNPDKFDKMDTKGIET 900
            AM LGREAA+YIS TFIKPIKLEFEK+Y PYLLISKKRYAGL+WTNP+KFDKMDTKGIET
Sbjct: 759  AMKLGREAADYISGTFIKPIKLEFEKIYFPYLLISKKRYAGLYWTNPEKFDKMDTKGIET 818

Query: 901  VRRDNCLLVKNLVNECLHKILIDRDIPGAVQYVKNTISDLLMNRMDLSLLVITKGLTKTG 1080
            VRRDNCLLVKNLV ECLHKIL+DRD+PGAVQYVKNTISDLLMNR+DLSLLVITKGLTKTG
Sbjct: 819  VRRDNCLLVKNLVTECLHKILVDRDVPGAVQYVKNTISDLLMNRVDLSLLVITKGLTKTG 878

Query: 1081 EDYANKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYEKSEDPIYVLENNIP 1260
            EDYA KAAHVELAERMRKRDAATAP VGDRVPYVIIKAAKGAKAYE+SEDPIYVL+NNIP
Sbjct: 879  EDYAVKAAHVELAERMRKRDAATAPTVGDRVPYVIIKAAKGAKAYERSEDPIYVLDNNIP 938

Query: 1261 IDAQYYLENQISKPLLRLFDPILKNASSELLHGSHTRAVSISTPSNSGIMKFAKKQLSCL 1440
            ID QYYLENQISKPLLR+F+PILKNAS ELLHGSHTRAVSISTPSNSGIMKFAKKQL+CL
Sbjct: 939  IDPQYYLENQISKPLLRIFEPILKNASRELLHGSHTRAVSISTPSNSGIMKFAKKQLTCL 998

Query: 1441 GCKALISNAEQTL 1479
            GCKA+IS + QTL
Sbjct: 999  GCKAVISGSNQTL 1011


>gb|AAY23282.1| Similar to dna polymerase delta catalytic subunit (ec 2.7.7.7) [Oryza
            sativa Japonica Group]
          Length = 629

 Score =  830 bits (2144), Expect = 0.0
 Identities = 420/493 (85%), Positives = 444/493 (90%)
 Frame = +1

Query: 1    VEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPSVKKQGSGDNTFEGATVLEAK 180
            VEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIP++K Q SG +TFEGATVLEA+
Sbjct: 61   VEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNIKGQASGQDTFEGATVLEAR 120

Query: 181  TGFYEKPIATLDFASLYPSIMMAYNLCYCSLVTPEDVRKFNLPPECVNKTPSGETFVKSN 360
             GFYEKPIATLDFASLYPSIMMAYNLCYC+LV PED RK NLPPE VNKTPSGETFVK +
Sbjct: 121  AGFYEKPIATLDFASLYPSIMMAYNLCYCTLVPPEDARKLNLPPESVNKTPSGETFVKPD 180

Query: 361  LQKGXXXXXXXXXXXXXXXXXXXXXXXXXPLEKAVLDGRQLALKISANSVYGFTGATVGQ 540
            +QKG                         P E+AVLDGRQLALKISANSVYGFTGATVGQ
Sbjct: 181  VQKGILPEILEELLAARKRAKADLKEAKDPFERAVLDGRQLALKISANSVYGFTGATVGQ 240

Query: 541  LPCLEISSSVTSYGRQMIEHTKKLVEERFNTLGGYEHNAEVIYGDTDSVMVQFGVPTVGA 720
            LPCLEISSSVTSYGRQMIEHTKKLVE++F TLGGYEHNAEVIYGDTDSVMVQFGV TV  
Sbjct: 241  LPCLEISSSVTSYGRQMIEHTKKLVEDKFTTLGGYEHNAEVIYGDTDSVMVQFGVSTVED 300

Query: 721  AMNLGREAAEYISATFIKPIKLEFEKVYHPYLLISKKRYAGLFWTNPDKFDKMDTKGIET 900
            AM LGREAA+YIS TFIKPIKLEFEK+Y PYLLISKKRYAGL+WTNP+KFDKMDTKGIET
Sbjct: 301  AMKLGREAADYISGTFIKPIKLEFEKIYFPYLLISKKRYAGLYWTNPEKFDKMDTKGIET 360

Query: 901  VRRDNCLLVKNLVNECLHKILIDRDIPGAVQYVKNTISDLLMNRMDLSLLVITKGLTKTG 1080
            VRRDNCLLVKNLV ECLHKIL+DRD+PGAVQYVKNTISDLLMNR+DLSLLVITKGLTKTG
Sbjct: 361  VRRDNCLLVKNLVTECLHKILVDRDVPGAVQYVKNTISDLLMNRVDLSLLVITKGLTKTG 420

Query: 1081 EDYANKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYEKSEDPIYVLENNIP 1260
            EDYA KAAHVELAERMRKRDAATAP VGDRVPYVIIKAAKGAKAYE+SEDPIYVL+NNIP
Sbjct: 421  EDYAVKAAHVELAERMRKRDAATAPTVGDRVPYVIIKAAKGAKAYERSEDPIYVLDNNIP 480

Query: 1261 IDAQYYLENQISKPLLRLFDPILKNASSELLHGSHTRAVSISTPSNSGIMKFAKKQLSCL 1440
            ID QYYLENQISKPLLR+F+PILKNAS ELLHGSHTRAVSISTPSNSGIMKFAKKQL+CL
Sbjct: 481  IDPQYYLENQISKPLLRIFEPILKNASRELLHGSHTRAVSISTPSNSGIMKFAKKQLTCL 540

Query: 1441 GCKALISNAEQTL 1479
            GCKA+IS + QTL
Sbjct: 541  GCKAVISGSNQTL 553