BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017486
         (2443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...   286   2e-74
ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor...   286   2e-74
ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinu...   284   7e-74
gb|AFW70820.1| putative RNA helicase family protein [Zea mays]        283   2e-73
ref|XP_003549455.1| PREDICTED: probable pre-mRNA-splicing factor...   283   2e-73

>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Vitis vinifera]
          Length = 1172

 Score =  286 bits (731), Expect = 2e-74
 Identities = 135/144 (93%), Positives = 142/144 (98%)
 Frame = -1

Query: 2443 AQDVRKQLLTIMDRYKLDVLTAGKNFTKIRQAIAAGFFFHAARKDPQEGYKTLVENQPVY 2264
            AQDVRKQLLTIMD+YKLDV++AGKNFTKIR+AI AGFFFHAARKDPQEGY+TLVENQPVY
Sbjct: 1029 AQDVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVY 1088

Query: 2263 IHPSSALFQRQPDWVLYHELVMTTKEYMREVTAIDPKWLVELAPRFFKVADPTKMSKRKR 2084
            IHPSSALFQRQPDWV+YHELVMTTKEYMREVT IDPKWLVELAPRFFKVADPTKMSKRKR
Sbjct: 1089 IHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKR 1148

Query: 2083 QERVEPLYDRYHEPNSWRLSKRRA 2012
            QER+EPLYDRYHEPNSWRLSKRRA
Sbjct: 1149 QERIEPLYDRYHEPNSWRLSKRRA 1172


>ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like isoform 2 [Vitis vinifera]
          Length = 1175

 Score =  286 bits (731), Expect = 2e-74
 Identities = 135/144 (93%), Positives = 142/144 (98%)
 Frame = -1

Query: 2443 AQDVRKQLLTIMDRYKLDVLTAGKNFTKIRQAIAAGFFFHAARKDPQEGYKTLVENQPVY 2264
            AQDVRKQLLTIMD+YKLDV++AGKNFTKIR+AI AGFFFHAARKDPQEGY+TLVENQPVY
Sbjct: 1032 AQDVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVY 1091

Query: 2263 IHPSSALFQRQPDWVLYHELVMTTKEYMREVTAIDPKWLVELAPRFFKVADPTKMSKRKR 2084
            IHPSSALFQRQPDWV+YHELVMTTKEYMREVT IDPKWLVELAPRFFKVADPTKMSKRKR
Sbjct: 1092 IHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKR 1151

Query: 2083 QERVEPLYDRYHEPNSWRLSKRRA 2012
            QER+EPLYDRYHEPNSWRLSKRRA
Sbjct: 1152 QERIEPLYDRYHEPNSWRLSKRRA 1175


>ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223551474|gb|EEF52960.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1177

 Score =  284 bits (727), Expect = 7e-74
 Identities = 134/144 (93%), Positives = 142/144 (98%)
 Frame = -1

Query: 2443 AQDVRKQLLTIMDRYKLDVLTAGKNFTKIRQAIAAGFFFHAARKDPQEGYKTLVENQPVY 2264
            AQDVRKQLL+IMD+YKLDV++AGKNFTKIR+AI AGFFFHAARKDPQEGY+TLVENQPVY
Sbjct: 1034 AQDVRKQLLSIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVY 1093

Query: 2263 IHPSSALFQRQPDWVLYHELVMTTKEYMREVTAIDPKWLVELAPRFFKVADPTKMSKRKR 2084
            IHPSSALFQRQPDWV+YHELVMTTKEYMREVT IDPKWLVELAPRFFKVADPTKMSKRKR
Sbjct: 1094 IHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKR 1153

Query: 2083 QERVEPLYDRYHEPNSWRLSKRRA 2012
            QER+EPLYDRYHEPNSWRLSKRRA
Sbjct: 1154 QERIEPLYDRYHEPNSWRLSKRRA 1177


>gb|AFW70820.1| putative RNA helicase family protein [Zea mays]
          Length = 1236

 Score =  283 bits (724), Expect = 2e-73
 Identities = 134/144 (93%), Positives = 141/144 (97%)
 Frame = -1

Query: 2443 AQDVRKQLLTIMDRYKLDVLTAGKNFTKIRQAIAAGFFFHAARKDPQEGYKTLVENQPVY 2264
            AQDVRKQLLTIMDRYKLDV++AGKNFTKIR+AI AGFFFHAARKDPQEGY+TLVENQPVY
Sbjct: 1093 AQDVRKQLLTIMDRYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVY 1152

Query: 2263 IHPSSALFQRQPDWVLYHELVMTTKEYMREVTAIDPKWLVELAPRFFKVADPTKMSKRKR 2084
            IHPSSALFQRQPDWV+YHELVMTTKEYMREVT IDPKWLVELAPRF+K ADPTKMSKRKR
Sbjct: 1153 IHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFYKGADPTKMSKRKR 1212

Query: 2083 QERVEPLYDRYHEPNSWRLSKRRA 2012
            QER+EPLYDRYHEPNSWRLSKRRA
Sbjct: 1213 QERIEPLYDRYHEPNSWRLSKRRA 1236


>ref|XP_003549455.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Glycine max]
          Length = 1197

 Score =  283 bits (724), Expect = 2e-73
 Identities = 132/144 (91%), Positives = 142/144 (98%)
 Frame = -1

Query: 2443 AQDVRKQLLTIMDRYKLDVLTAGKNFTKIRQAIAAGFFFHAARKDPQEGYKTLVENQPVY 2264
            AQDVRKQLLTIMD+YKLDV++AGKNFTK+R+AI AGFFFHA+RKDPQEGY+TLVENQPVY
Sbjct: 1054 AQDVRKQLLTIMDKYKLDVVSAGKNFTKVRKAITAGFFFHASRKDPQEGYRTLVENQPVY 1113

Query: 2263 IHPSSALFQRQPDWVLYHELVMTTKEYMREVTAIDPKWLVELAPRFFKVADPTKMSKRKR 2084
            IHPSSALFQRQPDWV+YHELVMTTKEYMREVT IDPKWLVELAPR+FKVADPTKMSKRKR
Sbjct: 1114 IHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKR 1173

Query: 2083 QERVEPLYDRYHEPNSWRLSKRRA 2012
            QER+EPLYDRYHEPNSWRLSKRRA
Sbjct: 1174 QERIEPLYDRYHEPNSWRLSKRRA 1197