BLASTX nr result

ID: Coptis25_contig00017484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017484
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602742.1| Sec14 cytosolic factor [Medicago truncatula]...   132   9e-33
gb|ABK93168.1| unknown [Populus trichocarpa]                          128   2e-32
ref|XP_002299355.1| predicted protein [Populus trichocarpa] gi|2...   128   2e-32
gb|AFK46517.1| unknown [Medicago truncatula]                          132   3e-32
ref|XP_002512674.1| aspartate semialdehyde dehydrogenase, putati...   129   1e-31

>ref|XP_003602742.1| Sec14 cytosolic factor [Medicago truncatula]
           gi|355491790|gb|AES72993.1| Sec14 cytosolic factor
           [Medicago truncatula] gi|388521721|gb|AFK48922.1|
           unknown [Medicago truncatula]
          Length = 272

 Score =  132 bits (332), Expect(2) = 9e-33
 Identities = 60/96 (62%), Positives = 80/96 (83%)
 Frame = +2

Query: 383 DPTSKEVDDLMLRRFLRARDLDIEKASSFFLKYLKWRREFLPNGSILESQISHDLAHKKL 562
           DP+SKEVDDLM+RRFLRARDLD++KAS+ FLKY+KWR+ F+P+GS+  S+I+ DLA +K+
Sbjct: 59  DPSSKEVDDLMIRRFLRARDLDVDKASAMFLKYMKWRKSFVPSGSVSPSEIADDLAQEKI 118

Query: 563 FLQGMDRNRRPIMVVFGGKHFPNKGKGGLDEFKRFV 670
           ++QG+D+  RPI+V F  KHF N  K GLD FKR+V
Sbjct: 119 YVQGLDKKGRPIIVAFAAKHFQN--KNGLDAFKRYV 152



 Score = 33.9 bits (76), Expect(2) = 9e-33
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = +3

Query: 156 DRKKEMENATTNKEDVKCSTTSCINGRNELEQRKLGLMRACVEKQDPTSKE 308
           D K E+    T K  +       +N   E E  K+ LMR  VE +DP+SKE
Sbjct: 15  DSKHELAKEET-KGKILVQDDGALNDSTEAELTKINLMRTLVESRDPSSKE 64


>gb|ABK93168.1| unknown [Populus trichocarpa]
          Length = 255

 Score =  128 bits (322), Expect(2) = 2e-32
 Identities = 63/96 (65%), Positives = 75/96 (78%)
 Frame = +2

Query: 383 DPTSKEVDDLMLRRFLRARDLDIEKASSFFLKYLKWRREFLPNGSILESQISHDLAHKKL 562
           DP+ KEVDDLM+RRFLRAR+LDIEKAS+ FLKYL WRR  +PNG I  S+I ++LA  KL
Sbjct: 42  DPSVKEVDDLMIRRFLRARELDIEKASTLFLKYLSWRRSIIPNGFISSSEIPNELAQNKL 101

Query: 563 FLQGMDRNRRPIMVVFGGKHFPNKGKGGLDEFKRFV 670
           F+QG D+  RPI+VVFG  H P   KG L+EFKRFV
Sbjct: 102 FMQGFDKQNRPIVVVFGAGHKPY--KGSLEEFKRFV 135



 Score = 36.6 bits (83), Expect(2) = 2e-32
 Identities = 16/24 (66%), Positives = 21/24 (87%)
 Frame = +3

Query: 237 NELEQRKLGLMRACVEKQDPTSKE 308
           NE+EQRK+ LMRA VE++DP+ KE
Sbjct: 24  NEIEQRKVRLMRAFVEREDPSVKE 47


>ref|XP_002299355.1| predicted protein [Populus trichocarpa] gi|222846613|gb|EEE84160.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score =  128 bits (322), Expect(2) = 2e-32
 Identities = 63/96 (65%), Positives = 75/96 (78%)
 Frame = +2

Query: 383 DPTSKEVDDLMLRRFLRARDLDIEKASSFFLKYLKWRREFLPNGSILESQISHDLAHKKL 562
           DP+ KEVDDLM+RRFLRAR+LDIEKAS+ FLKYL WRR  +PNG I  S+I ++LA  KL
Sbjct: 19  DPSVKEVDDLMIRRFLRARELDIEKASTLFLKYLSWRRSIIPNGFISSSEIPNELAQNKL 78

Query: 563 FLQGMDRNRRPIMVVFGGKHFPNKGKGGLDEFKRFV 670
           F+QG D+  RPI+VVFG  H P   KG L+EFKRFV
Sbjct: 79  FMQGFDKQNRPIVVVFGAGHKPY--KGSLEEFKRFV 112



 Score = 36.6 bits (83), Expect(2) = 2e-32
 Identities = 16/24 (66%), Positives = 21/24 (87%)
 Frame = +3

Query: 237 NELEQRKLGLMRACVEKQDPTSKE 308
           NE+EQRK+ LMRA VE++DP+ KE
Sbjct: 1   NEIEQRKVRLMRAFVEREDPSVKE 24


>gb|AFK46517.1| unknown [Medicago truncatula]
          Length = 272

 Score =  132 bits (332), Expect(2) = 3e-32
 Identities = 60/96 (62%), Positives = 80/96 (83%)
 Frame = +2

Query: 383 DPTSKEVDDLMLRRFLRARDLDIEKASSFFLKYLKWRREFLPNGSILESQISHDLAHKKL 562
           DP+SKEVDDLM+RRFLRARDLD++KAS+ FLKY+KWR+ F+P+GS+  S+I+ DLA +K+
Sbjct: 59  DPSSKEVDDLMIRRFLRARDLDVDKASAMFLKYMKWRKSFVPSGSVSPSEIADDLAQEKI 118

Query: 563 FLQGMDRNRRPIMVVFGGKHFPNKGKGGLDEFKRFV 670
           ++QG+D+  RPI+V F  KHF N  K GLD FKR+V
Sbjct: 119 YVQGLDKKGRPIIVAFAAKHFQN--KNGLDAFKRYV 152



 Score = 32.3 bits (72), Expect(2) = 3e-32
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = +3

Query: 156 DRKKEMENATTNKEDVKCSTTSCINGRNELEQRKLGLMRACVEKQDPTSKE 308
           D K E+    T K  +       +N   E E  K  LMR  VE +DP+SKE
Sbjct: 15  DSKHELAKEET-KGKILVQDDGALNDSTEAELTKFHLMRTLVESRDPSSKE 64


>ref|XP_002512674.1| aspartate semialdehyde dehydrogenase, putative [Ricinus communis]
           gi|223548635|gb|EEF50126.1| aspartate semialdehyde
           dehydrogenase, putative [Ricinus communis]
          Length = 257

 Score =  129 bits (324), Expect(2) = 1e-31
 Identities = 62/96 (64%), Positives = 76/96 (79%)
 Frame = +2

Query: 383 DPTSKEVDDLMLRRFLRARDLDIEKASSFFLKYLKWRREFLPNGSILESQISHDLAHKKL 562
           DP++KEVDDLM+RRFLRAR+ DIEKAS+  LKYL WRR F+PNGS+  S+I  +LA  KL
Sbjct: 44  DPSAKEVDDLMIRRFLRAREHDIEKASNLLLKYLSWRRSFIPNGSVYPSEIPKELAQNKL 103

Query: 563 FLQGMDRNRRPIMVVFGGKHFPNKGKGGLDEFKRFV 670
           F+QG+D+   PI+VVFG KH P   KG L+EFKRFV
Sbjct: 104 FMQGVDKKNHPIVVVFGAKHKPY--KGNLEEFKRFV 137



 Score = 33.5 bits (75), Expect(2) = 1e-31
 Identities = 13/24 (54%), Positives = 21/24 (87%)
 Frame = +3

Query: 237 NELEQRKLGLMRACVEKQDPTSKE 308
           NE+EQ+K+ +MR  VE++DP++KE
Sbjct: 26  NEIEQQKVHIMRVHVEREDPSAKE 49


Top