BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017443
         (1549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    74   1e-10
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    73   2e-10
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    73   2e-10
ref|NP_001174443.1| Os05g0434000 [Oryza sativa Japonica Group] g...    69   3e-09
gb|AAT58873.1| hypothetical protein [Oryza sativa Japonica Group]      69   3e-09

>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score = 73.6 bits (179), Expect = 1e-10
 Identities = 65/207 (31%), Positives = 93/207 (44%), Gaps = 8/207 (3%)
 Frame = -1

Query: 604  RNIYGSKVLTLHFEEYLNHTFICLIPKSQAPSKVKDYMPIVFVMSLTK*FLRFWPINL-- 431
            R+ + S V+    +  +N T ICLIPK   P  + DY PI    +  K   +     L  
Sbjct: 834  RHFFESDVM----DNQINQTQICLIPKIIDPKHMSDYRPISLCTASYKIISKILIKRLKQ 889

Query: 430  -LLKSISPNQGAFAPNRSRGDNVDVVHEVIHKINHVRNMNKKGLIALN*ICPRPM--IEL 260
             L   IS +Q AF P ++  DNV V HE++H +   R   + G +A+     +    +E 
Sbjct: 890  CLGDVISDSQAAFVPGQNISDNVLVAHELLHSLKSRREC-QSGYVAVKTDISKAYDRVEW 948

Query: 259  NXXXXXXXXXXXXXXXXVD*CNLILHI-YSNL*NLNGFPLQTFKPNRGLIQGDPLSPYLF 83
            N                      +  + Y  L  +NG P     P+RG+ QGDPLSPYLF
Sbjct: 949  NFLEKVMIQLGFAPRWVKWIMTCVTSVSYEVL--INGSPYGKIFPSRGIRQGDPLSPYLF 1006

Query: 82   I--REALSRLLHKPQVEKNINLPKYLK 8
            +   E LS +L K +V K I+  K  K
Sbjct: 1007 LFCAEVLSNMLRKAEVNKQIHGMKITK 1033


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 59/185 (31%), Positives = 86/185 (46%), Gaps = 8/185 (4%)
 Frame = -1

Query: 556  LNHTFICLIPKSQAPSKVKDYMPIVFVMSLTK*FLRFWPINL---LLKSISPNQGAFAPN 386
            +NHT I LIPK + P+   ++ PI     + K   +   I L   L + +S NQ AF P 
Sbjct: 488  INHTNIALIPKVKNPTTPAEFRPIALCNVVYKLVSKALVIRLKDFLPRLVSENQSAFVPG 547

Query: 385  RSRGDNVDVVHEVIHKINHVRNMNKKGLIALN*ICPRPMIELNXXXXXXXXXXXXXXXXV 206
            R   DN  +  EV H + H RN ++KG IA+     +    +                  
Sbjct: 548  RLITDNALIAMEVFHSMKH-RNRSRKGTIAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRW 606

Query: 205  D*CNLILHIYSNL*N---LNGFPLQTFKPNRGLIQGDPLSPYLF--IREALSRLLHKPQV 41
               NLI+   S++     +NG    +  P RGL  GDPLSPYLF  I +A S+++ K   
Sbjct: 607  --VNLIMSCVSSVSYSFIINGGVCGSVTPARGLRHGDPLSPYLFILIADAFSKMIQKKVQ 664

Query: 40   EKNIN 26
            EK ++
Sbjct: 665  EKQLH 669


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 61/183 (33%), Positives = 81/183 (44%), Gaps = 6/183 (3%)
 Frame = -1

Query: 556  LNHTFICLIPKSQAPSKVKDYMPIVFVMSLTK*FLRFWPINL---LLKSISPNQGAFAPN 386
            +N T I LIPK   P  +KD+ PI     L K   +     L   L   ISPNQ AF P 
Sbjct: 487  VNKTCIVLIPKCDHPQSMKDFRPISLCTVLYKILSKTLANRLKVILPAIISPNQSAFVPR 546

Query: 385  RSRGDNVDVVHEVIHKINHVRNMNKKGLIALN*ICPRPMIELN-XXXXXXXXXXXXXXXX 209
            R   DN  V  E+ H +   ++ NK G+ AL     +    +                  
Sbjct: 547  RLITDNALVAFEIFHAMKR-KDANKNGVCALKLDMSKAYDRVEWCFLERVMKKMGFCDGW 605

Query: 208  VD*CNLILHIYSNL*NLNGFPLQTFKPNRGLIQGDPLSPYLFI--REALSRLLHKPQVEK 35
            +D     +   S   N+NG    +  P+RGL QGDP+SPYLF+   +A S LL K   EK
Sbjct: 606  IDRVMACISSVSFTFNVNGVVEGSLSPSRGLRQGDPISPYLFLLCADAFSTLLSKAASEK 665

Query: 34   NIN 26
             I+
Sbjct: 666  KIH 668


>ref|NP_001174443.1| Os05g0434000 [Oryza sativa Japonica Group]
            gi|255676397|dbj|BAH93171.1| Os05g0434000 [Oryza sativa
            Japonica Group]
          Length = 1478

 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 59/184 (32%), Positives = 85/184 (46%), Gaps = 9/184 (4%)
 Frame = -1

Query: 553  NHTFICLIPKSQAPSKVKDYMPI----VFVMSLTK*FLRFWPINLLLKSISPNQGAFAPN 386
            N T + LIPK++ P  +KD  PI    V    ++K  +    + +LL+ ISP+Q AF P 
Sbjct: 833  NDTVVVLIPKTKQPDTLKDLRPISLCNVAYKLISKVIVNRLKV-VLLEIISPSQSAFVPR 891

Query: 385  RSRGDNVDVVHEVIHKINHVRNMNKKGLIALN*ICPRPMIELNXXXXXXXXXXXXXXXXV 206
            R    NV + +E+ H +N  R   K G+ A+     +    +                  
Sbjct: 892  RLITYNVLLAYELTHYLNQ-RKKGKNGVAAIKLDMSKAYDRVEWDFLRHMMLRLGFHDQW 950

Query: 205  D*CNLILHIYSNL---*NLNGFPLQTFKPNRGLIQGDPLSPYLFI--REALSRLLHKPQV 41
               NL++   +++     +NG       P RGL QGDPLSPYLFI   E LS LL K Q 
Sbjct: 951  --VNLVMKCVTSVTYRIKINGEHSDQIYPQRGLRQGDPLSPYLFIICAEGLSALLQKAQA 1008

Query: 40   EKNI 29
            +  I
Sbjct: 1009 DGKI 1012


>gb|AAT58873.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 1264

 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 59/184 (32%), Positives = 85/184 (46%), Gaps = 9/184 (4%)
 Frame = -1

Query: 553  NHTFICLIPKSQAPSKVKDYMPI----VFVMSLTK*FLRFWPINLLLKSISPNQGAFAPN 386
            N T + LIPK++ P  +KD  PI    V    ++K  +    + +LL+ ISP+Q AF P 
Sbjct: 833  NDTVVVLIPKTKQPDTLKDLRPISLCNVAYKLISKVIVNRLKV-VLLEIISPSQSAFVPR 891

Query: 385  RSRGDNVDVVHEVIHKINHVRNMNKKGLIALN*ICPRPMIELNXXXXXXXXXXXXXXXXV 206
            R    NV + +E+ H +N  R   K G+ A+     +    +                  
Sbjct: 892  RLITYNVLLAYELTHYLNQ-RKKGKNGVAAIKLDMSKAYDRVEWDFLRHMMLRLGFHDQW 950

Query: 205  D*CNLILHIYSNL---*NLNGFPLQTFKPNRGLIQGDPLSPYLFI--REALSRLLHKPQV 41
               NL++   +++     +NG       P RGL QGDPLSPYLFI   E LS LL K Q 
Sbjct: 951  --VNLVMKCVTSVTYRIKINGEHSDQIYPQRGLRQGDPLSPYLFIICAEGLSALLQKAQA 1008

Query: 40   EKNI 29
            +  I
Sbjct: 1009 DGKI 1012