BLASTX nr result

ID: Coptis25_contig00017440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017440
         (873 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529307.1| conserved hypothetical protein [Ricinus comm...   187   2e-45
ref|XP_002284580.1| PREDICTED: uncharacterized protein LOC100245...   184   3e-44
emb|CBI23587.3| unnamed protein product [Vitis vinifera]              181   1e-43
ref|XP_002306835.1| predicted protein [Populus trichocarpa] gi|2...   179   1e-42
gb|ABK92988.1| unknown [Populus trichocarpa]                          179   1e-42

>ref|XP_002529307.1| conserved hypothetical protein [Ricinus communis]
           gi|223531231|gb|EEF33076.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 157

 Score =  187 bits (476), Expect = 2e-45
 Identities = 96/147 (65%), Positives = 110/147 (74%)
 Frame = -2

Query: 863 MGFFSFAGRVLFASVFILSAWQEFNDYGVDGGPAAKALRPKFDVLTGHVTSQLGLQVPDI 684
           M F SF GRVLFASVFILSAWQEFND+GVDGGPAAK+  PKF+V + HV+S  G QVP +
Sbjct: 1   MAFASFVGRVLFASVFILSAWQEFNDFGVDGGPAAKSFAPKFNVFSRHVSSNTGFQVPPV 60

Query: 683 EIKQLVAAAIALKXXXXXXXXXXXXXGAYLLLLHQAIITPIVYDFYNYDLETKEXXXXXX 504
           EIK LVAAAIA+K             GAYLLLLHQA++TPI+YDFYNYD + KE      
Sbjct: 61  EIKHLVAAAIAVKGLGGLLFIFGSSFGAYLLLLHQAVVTPILYDFYNYDADKKEFHQLFT 120

Query: 503 XXXQGMALFGALLFFIGMKNSIPKRQV 423
              Q +ALFGALLFFIGMKNSIP+RQ+
Sbjct: 121 KFTQNLALFGALLFFIGMKNSIPRRQL 147


>ref|XP_002284580.1| PREDICTED: uncharacterized protein LOC100245894 [Vitis vinifera]
          Length = 230

 Score =  184 bits (466), Expect = 3e-44
 Identities = 92/149 (61%), Positives = 114/149 (76%)
 Frame = -2

Query: 869 TTMGFFSFAGRVLFASVFILSAWQEFNDYGVDGGPAAKALRPKFDVLTGHVTSQLGLQVP 690
           T+M F SF GRVLFASVFILSAWQEFN++GVDGGPA ++L PK DV + HV++ +G+QVP
Sbjct: 72  TSMAFVSFVGRVLFASVFILSAWQEFNEFGVDGGPAVESLAPKLDVFSKHVSANVGVQVP 131

Query: 689 DIEIKQLVAAAIALKXXXXXXXXXXXXXGAYLLLLHQAIITPIVYDFYNYDLETKEXXXX 510
           ++EIK LVAA+IALK             GA+LLLLHQAI+ PI+YDFYNYD++ KE    
Sbjct: 132 EVEIKNLVAASIALKGLGGLLFIFGSSLGAHLLLLHQAIVIPILYDFYNYDVDKKEFVVL 191

Query: 509 XXXXXQGMALFGALLFFIGMKNSIPKRQV 423
                Q +ALFGALLFFIGMKNS+P+RQ+
Sbjct: 192 FLKFTQNLALFGALLFFIGMKNSMPRRQL 220


>emb|CBI23587.3| unnamed protein product [Vitis vinifera]
          Length = 157

 Score =  181 bits (460), Expect = 1e-43
 Identities = 91/147 (61%), Positives = 112/147 (76%)
 Frame = -2

Query: 863 MGFFSFAGRVLFASVFILSAWQEFNDYGVDGGPAAKALRPKFDVLTGHVTSQLGLQVPDI 684
           M F SF GRVLFASVFILSAWQEFN++GVDGGPA ++L PK DV + HV++ +G+QVP++
Sbjct: 1   MAFVSFVGRVLFASVFILSAWQEFNEFGVDGGPAVESLAPKLDVFSKHVSANVGVQVPEV 60

Query: 683 EIKQLVAAAIALKXXXXXXXXXXXXXGAYLLLLHQAIITPIVYDFYNYDLETKEXXXXXX 504
           EIK LVAA+IALK             GA+LLLLHQAI+ PI+YDFYNYD++ KE      
Sbjct: 61  EIKNLVAASIALKGLGGLLFIFGSSLGAHLLLLHQAIVIPILYDFYNYDVDKKEFVVLFL 120

Query: 503 XXXQGMALFGALLFFIGMKNSIPKRQV 423
              Q +ALFGALLFFIGMKNS+P+RQ+
Sbjct: 121 KFTQNLALFGALLFFIGMKNSMPRRQL 147


>ref|XP_002306835.1| predicted protein [Populus trichocarpa] gi|222856284|gb|EEE93831.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  179 bits (453), Expect = 1e-42
 Identities = 94/146 (64%), Positives = 106/146 (72%)
 Frame = -2

Query: 863 MGFFSFAGRVLFASVFILSAWQEFNDYGVDGGPAAKALRPKFDVLTGHVTSQLGLQVPDI 684
           M F SF GRVLFASVFILSA+QEFN++GVDGGPAAKAL+PKF V T HV S  G+QVP+I
Sbjct: 1   MAFTSFLGRVLFASVFILSAYQEFNEFGVDGGPAAKALKPKFGVFTSHVQSHAGIQVPEI 60

Query: 683 EIKQLVAAAIALKXXXXXXXXXXXXXGAYLLLLHQAIITPIVYDFYNYDLETKEXXXXXX 504
           EIK LV+AAI LK             GAYLL++HQ I  PI+YDFYNYD E KE      
Sbjct: 61  EIKHLVSAAIFLKGIGGILFIIGSSLGAYLLIIHQLIAIPILYDFYNYDSEEKEFNQLFI 120

Query: 503 XXXQGMALFGALLFFIGMKNSIPKRQ 426
              Q MAL+GALLFFIGMKNS P+RQ
Sbjct: 121 KFTQNMALYGALLFFIGMKNSFPRRQ 146


>gb|ABK92988.1| unknown [Populus trichocarpa]
          Length = 157

 Score =  179 bits (453), Expect = 1e-42
 Identities = 93/147 (63%), Positives = 106/147 (72%)
 Frame = -2

Query: 863 MGFFSFAGRVLFASVFILSAWQEFNDYGVDGGPAAKALRPKFDVLTGHVTSQLGLQVPDI 684
           M F SF GRVLFASVFILSAWQEFN++G +GGPAA  L PKF V + HV+SQ G QVP  
Sbjct: 1   MAFVSFVGRVLFASVFILSAWQEFNEFGTNGGPAAHLLEPKFHVFSKHVSSQTGFQVPHF 60

Query: 683 EIKQLVAAAIALKXXXXXXXXXXXXXGAYLLLLHQAIITPIVYDFYNYDLETKEXXXXXX 504
           E+K  VAAAI++K             GAYLLLLHQ IITPI+YDFYNYD +TKE      
Sbjct: 61  EMKHAVAAAISVKAFGSLLFIFGSSVGAYLLLLHQIIITPILYDFYNYDADTKEFNLLFA 120

Query: 503 XXXQGMALFGALLFFIGMKNSIPKRQV 423
              Q +ALFGALLFFIGMKNSIP+RQ+
Sbjct: 121 KFAQNLALFGALLFFIGMKNSIPRRQL 147


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