BLASTX nr result

ID: Coptis25_contig00017417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017417
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266659.1| PREDICTED: uncharacterized protein LOC100249...   101   7e-20
emb|CBI39729.3| unnamed protein product [Vitis vinifera]              101   7e-20
emb|CAN64334.1| hypothetical protein VITISV_039730 [Vitis vinifera]   101   7e-20
ref|XP_002522753.1| transporter, putative [Ricinus communis] gi|...    96   2e-18
ref|NP_200377.1| DEK domain-containing chromatin associated prot...    93   2e-17

>ref|XP_002266659.1| PREDICTED: uncharacterized protein LOC100249691 [Vitis vinifera]
          Length = 599

 Score =  101 bits (251), Expect = 7e-20
 Identities = 54/97 (55%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
 Frame = -3

Query: 296 LKIKERLNKCVKEKLLEFCDVLDIGVVKTTIKSIKKEDIVTKLLDFLAAPQSTTNRSLAE 117
           +K+KE+ +KCVKEKLLEFCDVLDI + KTT    +KEDIVTKL++FL AP  TT   LAE
Sbjct: 258 IKVKEKFDKCVKEKLLEFCDVLDISIAKTT---TRKEDIVTKLIEFLVAPHPTTTVLLAE 314

Query: 116 KE---SGTTKKRSVETSMQESGRSAAKRSSVKQRKTE 15
           KE    G  +KR V+ +   SG +++KRS+  +RKTE
Sbjct: 315 KEQSIKGKKRKRVVKRNSSMSGSTSSKRSAKSRRKTE 351


>emb|CBI39729.3| unnamed protein product [Vitis vinifera]
          Length = 514

 Score =  101 bits (251), Expect = 7e-20
 Identities = 54/97 (55%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
 Frame = -3

Query: 296 LKIKERLNKCVKEKLLEFCDVLDIGVVKTTIKSIKKEDIVTKLLDFLAAPQSTTNRSLAE 117
           +K+KE+ +KCVKEKLLEFCDVLDI + KTT    +KEDIVTKL++FL AP  TT   LAE
Sbjct: 173 IKVKEKFDKCVKEKLLEFCDVLDISIAKTT---TRKEDIVTKLIEFLVAPHPTTTVLLAE 229

Query: 116 KE---SGTTKKRSVETSMQESGRSAAKRSSVKQRKTE 15
           KE    G  +KR V+ +   SG +++KRS+  +RKTE
Sbjct: 230 KEQSIKGKKRKRVVKRNSSMSGSTSSKRSAKSRRKTE 266


>emb|CAN64334.1| hypothetical protein VITISV_039730 [Vitis vinifera]
          Length = 1098

 Score =  101 bits (251), Expect = 7e-20
 Identities = 54/97 (55%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
 Frame = -3

Query: 296 LKIKERLNKCVKEKLLEFCDVLDIGVVKTTIKSIKKEDIVTKLLDFLAAPQSTTNRSLAE 117
           +K+KE+ +KCVKEKLLEFCDVLDI + KTT    +KEDIVTKL++FL AP  TT   LAE
Sbjct: 277 IKVKEKFDKCVKEKLLEFCDVLDISIAKTT---TRKEDIVTKLIEFLVAPHXTTTVLLAE 333

Query: 116 KE---SGTTKKRSVETSMQESGRSAAKRSSVKQRKTE 15
           KE    G  +KR V+ +   SG +++KRS+  +RKTE
Sbjct: 334 KEQSIKGKKRKRVVKRNSSMSGSTSSKRSAKSRRKTE 370


>ref|XP_002522753.1| transporter, putative [Ricinus communis]
           gi|223537991|gb|EEF39604.1| transporter, putative
           [Ricinus communis]
          Length = 737

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 52/97 (53%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
 Frame = -3

Query: 293 KIKERLNKCVKEKLLEFCDVLDIGVVKTTIKSIKKEDIVTKLLDFLAAPQSTTNRSLAEK 114
           K+KE+ +KC KEKLLEFCDVLDI + KTT    KKEDIV+KL+DFL +P +TT   LAEK
Sbjct: 381 KVKEKFDKCNKEKLLEFCDVLDISIAKTT---TKKEDIVSKLIDFLVSPHATTTVLLAEK 437

Query: 113 ESGT-TKKRSVETSMQESGRSAAKRSSVKQRKTEGSS 6
           E  + +KKR   T    SG  +  RS+  Q++ EG+S
Sbjct: 438 EKASKSKKRKRVTKSAASGNLSLTRSAKNQKRAEGAS 474


>ref|NP_200377.1| DEK domain-containing chromatin associated protein [Arabidopsis
           thaliana] gi|332009281|gb|AED96664.1| DEK
           domain-containing chromatin associated protein
           [Arabidopsis thaliana]
          Length = 778

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 49/94 (52%), Positives = 65/94 (69%)
 Frame = -3

Query: 296 LKIKERLNKCVKEKLLEFCDVLDIGVVKTTIKSIKKEDIVTKLLDFLAAPQSTTNRSLAE 117
           LK+KE+  K  KEKLLEFCD+ DI V K T K   KEDIVTKL++FL  P +TT+  + E
Sbjct: 422 LKVKEKFEKINKEKLLEFCDLFDISVAKATTK---KEDIVTKLVEFLEKPHATTDVLVNE 478

Query: 116 KESGTTKKRSVETSMQESGRSAAKRSSVKQRKTE 15
           KE G  +KR+ + S   +G S++KRS+  Q+KTE
Sbjct: 479 KEKGVKRKRTPKKSSPAAGSSSSKRSAKSQKKTE 512


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