BLASTX nr result

ID: Coptis25_contig00017396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017396
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144420.1| PREDICTED: probable inactive serine/threonin...   135   4e-30
ref|XP_002520873.1| ATP binding protein, putative [Ricinus commu...   133   1e-29
ref|NP_181605.2| SCY1-like protein [Arabidopsis thaliana] gi|330...   133   2e-29
dbj|BAF02142.1| hypothetical protein [Arabidopsis thaliana]           133   2e-29
ref|XP_002319344.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-29

>ref|XP_004144420.1| PREDICTED: probable inactive serine/threonine-protein kinase
           scy1-like [Cucumis sativus]
           gi|449500052|ref|XP_004160990.1| PREDICTED: probable
           inactive serine/threonine-protein kinase scy1-like
           [Cucumis sativus]
          Length = 796

 Score =  135 bits (339), Expect = 4e-30
 Identities = 67/75 (89%), Positives = 72/75 (96%)
 Frame = -3

Query: 284 PLLASSLEFGSAAAPALTALLKMGSWFSTEEYSVKVLPTVVKLFASNDRAIRVGLLQHID 105
           PLLASSLEFGSAAAPALTALLKMGSW STEE+S KVLPT+VKLFASNDRAIR GLLQHID
Sbjct: 331 PLLASSLEFGSAAAPALTALLKMGSWLSTEEFSAKVLPTIVKLFASNDRAIRTGLLQHID 390

Query: 104 QYGESLSSQIVDEQI 60
           Q+GESLSSQ+VDEQ+
Sbjct: 391 QFGESLSSQMVDEQV 405


>ref|XP_002520873.1| ATP binding protein, putative [Ricinus communis]
           gi|223540004|gb|EEF41582.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 792

 Score =  133 bits (335), Expect = 1e-29
 Identities = 66/75 (88%), Positives = 71/75 (94%)
 Frame = -3

Query: 284 PLLASSLEFGSAAAPALTALLKMGSWFSTEEYSVKVLPTVVKLFASNDRAIRVGLLQHID 105
           PLLASSLEFGSAAAPALTALLKMGSW S EE+S KVLPT+VKLFASNDRAIRV LLQHID
Sbjct: 325 PLLASSLEFGSAAAPALTALLKMGSWLSAEEFSAKVLPTIVKLFASNDRAIRVSLLQHID 384

Query: 104 QYGESLSSQIVDEQI 60
           QYGESLS+Q+VDEQ+
Sbjct: 385 QYGESLSAQVVDEQV 399


>ref|NP_181605.2| SCY1-like protein [Arabidopsis thaliana]
           gi|330254775|gb|AEC09869.1| SCY1-like protein
           [Arabidopsis thaliana]
          Length = 798

 Score =  133 bits (334), Expect = 2e-29
 Identities = 65/75 (86%), Positives = 72/75 (96%)
 Frame = -3

Query: 284 PLLASSLEFGSAAAPALTALLKMGSWFSTEEYSVKVLPTVVKLFASNDRAIRVGLLQHID 105
           PLLASSLEFGSAAAPALTALLKMGSW STE++SVKVLPT+VKLFASNDRAIRV LLQH+D
Sbjct: 331 PLLASSLEFGSAAAPALTALLKMGSWLSTEDFSVKVLPTIVKLFASNDRAIRVSLLQHVD 390

Query: 104 QYGESLSSQIVDEQI 60
           Q+GES+S QIVDEQ+
Sbjct: 391 QFGESMSGQIVDEQV 405


>dbj|BAF02142.1| hypothetical protein [Arabidopsis thaliana]
          Length = 798

 Score =  133 bits (334), Expect = 2e-29
 Identities = 65/75 (86%), Positives = 72/75 (96%)
 Frame = -3

Query: 284 PLLASSLEFGSAAAPALTALLKMGSWFSTEEYSVKVLPTVVKLFASNDRAIRVGLLQHID 105
           PLLASSLEFGSAAAPALTALLKMGSW STE++SVKVLPT+VKLFASNDRAIRV LLQH+D
Sbjct: 331 PLLASSLEFGSAAAPALTALLKMGSWLSTEDFSVKVLPTIVKLFASNDRAIRVSLLQHVD 390

Query: 104 QYGESLSSQIVDEQI 60
           Q+GES+S QIVDEQ+
Sbjct: 391 QFGESMSGQIVDEQV 405


>ref|XP_002319344.1| predicted protein [Populus trichocarpa] gi|222857720|gb|EEE95267.1|
           predicted protein [Populus trichocarpa]
          Length = 800

 Score =  132 bits (333), Expect = 2e-29
 Identities = 64/75 (85%), Positives = 73/75 (97%)
 Frame = -3

Query: 284 PLLASSLEFGSAAAPALTALLKMGSWFSTEEYSVKVLPTVVKLFASNDRAIRVGLLQHID 105
           PLLAS+LEFGSAAAPALTALLKMGSW S+EE+SVKVLPT+VKLF+SNDRA+RV LLQHID
Sbjct: 333 PLLASALEFGSAAAPALTALLKMGSWLSSEEFSVKVLPTIVKLFSSNDRAVRVSLLQHID 392

Query: 104 QYGESLSSQIVDEQI 60
           QYGESLS+Q+VDEQ+
Sbjct: 393 QYGESLSAQVVDEQV 407


Top