BLASTX nr result

ID: Coptis25_contig00017395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017395
         (1726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263868.1| PREDICTED: vacuolar protein-sorting-associat...   252   2e-64
ref|XP_002877902.1| hypothetical protein ARALYDRAFT_906697 [Arab...   243   9e-62
ref|XP_002323492.1| predicted protein [Populus trichocarpa] gi|2...   243   9e-62
ref|XP_002326225.1| predicted protein [Populus trichocarpa] gi|2...   243   1e-61
ref|NP_190880.1| vacuolar protein-sorting-associated protein 37-...   240   7e-61

>ref|XP_002263868.1| PREDICTED: vacuolar protein-sorting-associated protein 37 homolog 2
            [Vitis vinifera] gi|297740010|emb|CBI30192.3| unnamed
            protein product [Vitis vinifera]
          Length = 233

 Score =  252 bits (644), Expect = 2e-64
 Identities = 127/163 (77%), Positives = 147/163 (90%)
 Frame = +3

Query: 825  EAVAIIHLLKDRSVDELRKLLSDKDSYNQFLLSLDQVKIQNNLRDELRKGTLQLARENQE 1004
            EA  +I LLKD+S+DELRKLLSDKD+YNQ LLSLDQVKIQNNLRDELRK TLQLAREN E
Sbjct: 69   EAAGMIVLLKDKSIDELRKLLSDKDAYNQLLLSLDQVKIQNNLRDELRKETLQLARENLE 128

Query: 1005 KEPRILELRNQCRIIRTTELAAAQEKLNELQRQKEENLKFYSPSTRLQKLQDSMNKIEEE 1184
            KEP+I+ELRNQCRIIRTTELAAAQEKLNEL+RQKEE LKFYSP+  L +LQ++MNK EEE
Sbjct: 129  KEPQIVELRNQCRIIRTTELAAAQEKLNELERQKEEILKFYSPACLLHRLQETMNKTEEE 188

Query: 1185 SETLHKQLLEKEIDLNVFLQKHKKLRAVYHRQALVHLAAKSSS 1313
            SETLH+QLL++E+DL  F+QK+K+LR  YHR+AL HLAAK+SS
Sbjct: 189  SETLHRQLLDREMDLGAFVQKYKRLRTTYHRRALTHLAAKTSS 231


>ref|XP_002877902.1| hypothetical protein ARALYDRAFT_906697 [Arabidopsis lyrata subsp.
            lyrata] gi|297323740|gb|EFH54161.1| hypothetical protein
            ARALYDRAFT_906697 [Arabidopsis lyrata subsp. lyrata]
          Length = 217

 Score =  243 bits (621), Expect = 9e-62
 Identities = 122/163 (74%), Positives = 144/163 (88%)
 Frame = +3

Query: 825  EAVAIIHLLKDRSVDELRKLLSDKDSYNQFLLSLDQVKIQNNLRDELRKGTLQLARENQE 1004
            EA  II  LKD+SVDELRKLLSDKD+Y QFLLSLDQVKIQNN++DELR+ TLQLAREN E
Sbjct: 54   EAAGIIAFLKDKSVDELRKLLSDKDAYQQFLLSLDQVKIQNNIKDELRRETLQLARENLE 113

Query: 1005 KEPRILELRNQCRIIRTTELAAAQEKLNELQRQKEENLKFYSPSTRLQKLQDSMNKIEEE 1184
            KEP+I+ELRNQCRIIRTTELAAAQEKLNEL+RQKEE LKFYSP + L KLQ++MN+++EE
Sbjct: 114  KEPQIMELRNQCRIIRTTELAAAQEKLNELERQKEEILKFYSPGSLLHKLQEAMNQVDEE 173

Query: 1185 SETLHKQLLEKEIDLNVFLQKHKKLRAVYHRQALVHLAAKSSS 1313
            SE L ++ LEKEID   F+QK+KKLR  YHR+AL+HLAAK+S+
Sbjct: 174  SEALQEKFLEKEIDTVAFVQKYKKLRTTYHRRALIHLAAKTSN 216


>ref|XP_002323492.1| predicted protein [Populus trichocarpa] gi|222868122|gb|EEF05253.1|
            predicted protein [Populus trichocarpa]
          Length = 230

 Score =  243 bits (621), Expect = 9e-62
 Identities = 123/162 (75%), Positives = 145/162 (89%)
 Frame = +3

Query: 825  EAVAIIHLLKDRSVDELRKLLSDKDSYNQFLLSLDQVKIQNNLRDELRKGTLQLARENQE 1004
            EA AII LLKD+SVDELRKLLSDKD+Y+QFLLSLDQVKIQNN+RDEL K TLQLAREN E
Sbjct: 66   EAAAIITLLKDKSVDELRKLLSDKDAYHQFLLSLDQVKIQNNIRDELCKETLQLARENLE 125

Query: 1005 KEPRILELRNQCRIIRTTELAAAQEKLNELQRQKEENLKFYSPSTRLQKLQDSMNKIEEE 1184
            KEPRI+ELRNQCRIIRTTELAAAQEKLNEL++QKEE L+  SP++ LQ+LQ++MNK EEE
Sbjct: 126  KEPRIMELRNQCRIIRTTELAAAQEKLNELEKQKEELLRSCSPASILQRLQEAMNKTEEE 185

Query: 1185 SETLHKQLLEKEIDLNVFLQKHKKLRAVYHRQALVHLAAKSS 1310
            S+  H+Q LEKE+DL  F+QK+KKLR  YH++AL+HLAAK+S
Sbjct: 186  SDAFHRQFLEKEMDLGAFVQKYKKLRTTYHKRALIHLAAKAS 227


>ref|XP_002326225.1| predicted protein [Populus trichocarpa] gi|222833418|gb|EEE71895.1|
            predicted protein [Populus trichocarpa]
          Length = 233

 Score =  243 bits (620), Expect = 1e-61
 Identities = 123/162 (75%), Positives = 145/162 (89%)
 Frame = +3

Query: 825  EAVAIIHLLKDRSVDELRKLLSDKDSYNQFLLSLDQVKIQNNLRDELRKGTLQLARENQE 1004
            EA A I LLKD+SVDELRKLLSDKD+Y+QFLLSLDQVKIQNN+RDELRK TLQLAREN E
Sbjct: 69   EAAAFITLLKDKSVDELRKLLSDKDAYHQFLLSLDQVKIQNNIRDELRKETLQLARENLE 128

Query: 1005 KEPRILELRNQCRIIRTTELAAAQEKLNELQRQKEENLKFYSPSTRLQKLQDSMNKIEEE 1184
            KEPRI+ELRNQCRIIRTTELAAA+EKLNEL+RQKEE L+  SP++ LQ+LQ++MNK +EE
Sbjct: 129  KEPRIMELRNQCRIIRTTELAAAKEKLNELERQKEELLRSCSPASLLQRLQEAMNKTDEE 188

Query: 1185 SETLHKQLLEKEIDLNVFLQKHKKLRAVYHRQALVHLAAKSS 1310
            SE LH+Q L+KEIDL  F+ K+KKLR  YH++AL+HLAAK+S
Sbjct: 189  SEALHRQFLDKEIDLGSFVLKYKKLRTTYHKRALIHLAAKAS 230


>ref|NP_190880.1| vacuolar protein-sorting-associated protein 37-1 [Arabidopsis
            thaliana] gi|75202732|sp|Q9SCP9.1|VP371_ARATH RecName:
            Full=Vacuolar protein-sorting-associated protein 37
            homolog 1; Short=AtVPS37-1; AltName: Full=ESCRT-I complex
            subunit VPS37 homolog 1 gi|6630732|emb|CAB64215.1|
            putative protein [Arabidopsis thaliana]
            gi|332645518|gb|AEE79039.1| vacuolar
            protein-sorting-associated protein 37-1 [Arabidopsis
            thaliana]
          Length = 217

 Score =  240 bits (613), Expect = 7e-61
 Identities = 119/163 (73%), Positives = 143/163 (87%)
 Frame = +3

Query: 825  EAVAIIHLLKDRSVDELRKLLSDKDSYNQFLLSLDQVKIQNNLRDELRKGTLQLARENQE 1004
            EA  II  LKD+SVDELRKLLSDKD+Y QFLLSLDQVK+QNN++DELR+ TLQLAR+N E
Sbjct: 54   EAAGIIVFLKDKSVDELRKLLSDKDAYQQFLLSLDQVKVQNNIKDELRRETLQLARDNLE 113

Query: 1005 KEPRILELRNQCRIIRTTELAAAQEKLNELQRQKEENLKFYSPSTRLQKLQDSMNKIEEE 1184
            KEP+I+ELRNQCRIIRTTELA AQEKLNEL+RQKEE LKFYSP + L KLQ++MN+++EE
Sbjct: 114  KEPQIMELRNQCRIIRTTELATAQEKLNELERQKEEILKFYSPGSLLHKLQEAMNQVDEE 173

Query: 1185 SETLHKQLLEKEIDLNVFLQKHKKLRAVYHRQALVHLAAKSSS 1313
            SE L ++ LEKEID   F+QK+KKLR  YHR+AL+HLAAK+S+
Sbjct: 174  SEALQEKFLEKEIDTAAFVQKYKKLRTTYHRRALIHLAAKTSN 216


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