BLASTX nr result

ID: Coptis25_contig00017379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017379
         (1196 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273011.1| PREDICTED: uncharacterized protein LOC100265...   392   e-107
emb|CBI17145.3| unnamed protein product [Vitis vinifera]              392   e-107
emb|CAN82771.1| hypothetical protein VITISV_011743 [Vitis vinifera]   351   2e-94
ref|XP_002523713.1| conserved hypothetical protein [Ricinus comm...   338   1e-90
ref|XP_002880950.1| hypothetical protein ARALYDRAFT_481696 [Arab...   312   1e-82

>ref|XP_002273011.1| PREDICTED: uncharacterized protein LOC100265349 [Vitis vinifera]
          Length = 455

 Score =  392 bits (1008), Expect = e-107
 Identities = 205/323 (63%), Positives = 246/323 (76%), Gaps = 2/323 (0%)
 Frame = +2

Query: 2    GQIFLEELLINGWLSELVITCAHVEECITTWTFNLMLYSRNEELRTSASNFWCTVLSHND 181
            G+ FLE L++NGWLS+LV  C HVE+ I  WTFNLMLYS  EELRTSA +FWC++LS   
Sbjct: 138  GEAFLEGLIVNGWLSKLVFMCGHVEKSIAMWTFNLMLYSSKEELRTSACDFWCSILSKT- 196

Query: 182  EHGLCSIRIDGFPSYSELKRALEVYGYQLYSSDNFSSLPEMSDADSDSEGPPQNIRCWVK 361
            E  L   +ID FPSYS+LKRALE+YG+      NFSS  E+ + DSD+ GPPQNIR W+K
Sbjct: 197  EVDLPFAKIDWFPSYSDLKRALEIYGFL----PNFSSNRELLNTDSDTGGPPQNIRAWMK 252

Query: 362  FVAVCSQVRSTLPIISNNSEAEELLGAIISFFLDRQLQGLSLLFYECMLAVISSFTDNEW 541
            F+A+C QVRS   I S  SEAEEL+  +I  FLDRQLQGLS+LFYECML+VIS FT+ EW
Sbjct: 253  FMAICCQVRSKHSIFST-SEAEELIEVVICLFLDRQLQGLSMLFYECMLSVISFFTEKEW 311

Query: 542  SSSCERVAKSLAISTQKDLNSLRLAECISGVDARSKQLRREVGFQILKKFFNMKVSDGEE 721
              SCE+VAKSLA    +DLN LR+ ECISGV+ RSK LR  V FQIL   F+ KV+D EE
Sbjct: 312  HYSCEKVAKSLACRVPQDLNCLRIVECISGVNTRSKCLRSAVAFQILVNCFDNKVTDAEE 371

Query: 722  ILQQLLAINIKE--CDNFSEMYIYLVLTEYWLFSNPLLEEKPYIREMWGVYLRNYSCQIA 895
            IL+ L++IN+K+  CD F +MYIYLVLTE WL+SNPLLE+KP I EMW +YLRN SCQI 
Sbjct: 372  ILKFLISINVKDRSCDLF-KMYIYLVLTENWLYSNPLLEDKPVINEMWSLYLRNCSCQIT 430

Query: 896  STDMRPCASKVRNKASFLLQSTV 964
            +TD+R  ASKVRNKAS+LLQ TV
Sbjct: 431  NTDLRTYASKVRNKASYLLQGTV 453


>emb|CBI17145.3| unnamed protein product [Vitis vinifera]
          Length = 458

 Score =  392 bits (1008), Expect = e-107
 Identities = 205/323 (63%), Positives = 246/323 (76%), Gaps = 2/323 (0%)
 Frame = +2

Query: 2    GQIFLEELLINGWLSELVITCAHVEECITTWTFNLMLYSRNEELRTSASNFWCTVLSHND 181
            G+ FLE L++NGWLS+LV  C HVE+ I  WTFNLMLYS  EELRTSA +FWC++LS   
Sbjct: 141  GEAFLEGLIVNGWLSKLVFMCGHVEKSIAMWTFNLMLYSSKEELRTSACDFWCSILSKT- 199

Query: 182  EHGLCSIRIDGFPSYSELKRALEVYGYQLYSSDNFSSLPEMSDADSDSEGPPQNIRCWVK 361
            E  L   +ID FPSYS+LKRALE+YG+      NFSS  E+ + DSD+ GPPQNIR W+K
Sbjct: 200  EVDLPFAKIDWFPSYSDLKRALEIYGFL----PNFSSNRELLNTDSDTGGPPQNIRAWMK 255

Query: 362  FVAVCSQVRSTLPIISNNSEAEELLGAIISFFLDRQLQGLSLLFYECMLAVISSFTDNEW 541
            F+A+C QVRS   I S  SEAEEL+  +I  FLDRQLQGLS+LFYECML+VIS FT+ EW
Sbjct: 256  FMAICCQVRSKHSIFST-SEAEELIEVVICLFLDRQLQGLSMLFYECMLSVISFFTEKEW 314

Query: 542  SSSCERVAKSLAISTQKDLNSLRLAECISGVDARSKQLRREVGFQILKKFFNMKVSDGEE 721
              SCE+VAKSLA    +DLN LR+ ECISGV+ RSK LR  V FQIL   F+ KV+D EE
Sbjct: 315  HYSCEKVAKSLACRVPQDLNCLRIVECISGVNTRSKCLRSAVAFQILVNCFDNKVTDAEE 374

Query: 722  ILQQLLAINIKE--CDNFSEMYIYLVLTEYWLFSNPLLEEKPYIREMWGVYLRNYSCQIA 895
            IL+ L++IN+K+  CD F +MYIYLVLTE WL+SNPLLE+KP I EMW +YLRN SCQI 
Sbjct: 375  ILKFLISINVKDRSCDLF-KMYIYLVLTENWLYSNPLLEDKPVINEMWSLYLRNCSCQIT 433

Query: 896  STDMRPCASKVRNKASFLLQSTV 964
            +TD+R  ASKVRNKAS+LLQ TV
Sbjct: 434  NTDLRTYASKVRNKASYLLQGTV 456


>emb|CAN82771.1| hypothetical protein VITISV_011743 [Vitis vinifera]
          Length = 509

 Score =  351 bits (901), Expect = 2e-94
 Identities = 195/349 (55%), Positives = 236/349 (67%), Gaps = 40/349 (11%)
 Frame = +2

Query: 2    GQIFLEELLINGWLSELVITCAHVEECITTWTFNLMLYSRNEELRTSASNFWCTVLSHND 181
            G+ FLE L++NGWLS+LV  C HVE+ I  WTFNLMLYS  EELRTSA +FWC++LS   
Sbjct: 162  GEAFLEGLIVNGWLSKLVFMCGHVEKSIAMWTFNLMLYSSKEELRTSACDFWCSILSKT- 220

Query: 182  EHGLCSIRIDGFPSYSELKRALEVYGYQLYSSDNF----SSLPEMSDA------------ 313
            E  L   +ID FPSYS+LKRALE+YG+    S N     + +PE+S              
Sbjct: 221  EVDLPFAKIDWFPSYSDLKRALEIYGFLPNFSSNRELLNTEIPELSYTYSHRFCHLHSWT 280

Query: 314  -----------DSDSEGPPQNIRCWVKFVAVCSQVRSTLPIISNNSEAEELLGAIISFFL 460
                       DSD+ GPPQNIR W+KF+A+C QVRS   I S  SEAEEL+  +I  FL
Sbjct: 281  VLLQHPQNCLLDSDTGGPPQNIRAWMKFMAICCQVRSKHSIFST-SEAEELIEVVICLFL 339

Query: 461  DRQLQGLSLLFYECMLAVISSFTDNEWSSSCERVAKSLAISTQKDLNSLRLAECISGVDA 640
            DRQLQGLS+LFYECML+VIS FT+ EW  SCE+VAKSLA    +DLN LR+ ECISGV+ 
Sbjct: 340  DRQLQGLSMLFYECMLSVISFFTEKEWHYSCEKVAKSLACRVPQDLNCLRIVECISGVNT 399

Query: 641  RSKQLRREVGFQILKKFFNMK-----------VSDGEEILQQLLAINIKE--CDNFSEMY 781
            RSK LR  V FQIL   F+ K           V+D EEIL+ L++IN+K+  CD F +MY
Sbjct: 400  RSKCLRSAVAFQILVNCFDNKLHVHVSNCSPQVTDAEEILKFLISINVKDRSCDLF-KMY 458

Query: 782  IYLVLTEYWLFSNPLLEEKPYIREMWGVYLRNYSCQIASTDMRPCASKV 928
            IYLVLTE WL+SNPLLE+KP I EMW +YLRN SCQI +TD+R  ASKV
Sbjct: 459  IYLVLTENWLYSNPLLEDKPVINEMWSLYLRNCSCQITNTDLRTYASKV 507


>ref|XP_002523713.1| conserved hypothetical protein [Ricinus communis]
            gi|223537017|gb|EEF38653.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 458

 Score =  338 bits (868), Expect = 1e-90
 Identities = 180/325 (55%), Positives = 222/325 (68%), Gaps = 2/325 (0%)
 Frame = +2

Query: 2    GQIFLEELLINGWLSELVITCAHVEECITTWTFNLMLYSRNEELRTSASNFWCTVLSHND 181
            G+ FL  LL+NGWLS+LVI   HVEE +  WTFNL+LYS  EELRTSA +FWC++L   +
Sbjct: 140  GETFLAGLLVNGWLSKLVIRHGHVEESLAKWTFNLILYSSKEELRTSAHDFWCSILLPGN 199

Query: 182  EHGLCSIRIDGFPSYSELKRALEVYGYQLYSSDNFSSLPEMSDADSDSEGPPQNIRCWVK 361
            +      R++  PSYSELKRALE YG+      +FSS  +  + D    GPP+NIR W+K
Sbjct: 200  KVDKMPTRVEWSPSYSELKRALETYGFLF----DFSSQTKSGNTDFSRRGPPENIRGWIK 255

Query: 362  FVAVCSQVRSTLPIISNNSEAEELLGAIISFFLDRQLQGLSLLFYECMLAVISSFTDNEW 541
            F   C  VRS  PI S  S+AEEL+  II   LDRQLQGL +L Y CM + I+ FTD EW
Sbjct: 256  FADACCLVRSKQPIFSA-SDAEELVKVIIYLSLDRQLQGLLVLLYGCMQSAINYFTDEEW 314

Query: 542  SSSCERVAKSLAISTQKDLNSLRLAECISGVDARSKQLRREVGFQILKKFFNMKVSDGEE 721
            ++SCE +A+++A    +DLN LR  ECISGV  RS  LR  V +QIL   F+ K +D E 
Sbjct: 315  TTSCEEIARAIACRVPRDLNCLRALECISGVGTRSNHLRSAVAYQILLVCFDNKAADEEG 374

Query: 722  ILQQLLAINIKE--CDNFSEMYIYLVLTEYWLFSNPLLEEKPYIREMWGVYLRNYSCQIA 895
            IL  L++IN+K+  CD F +MYIYLVLTE WL SNP+LE KP I EMWGVYLRN S QI 
Sbjct: 375  ILNLLMSINVKDKSCD-FFKMYIYLVLTENWLLSNPILEYKPVIYEMWGVYLRNCSSQIT 433

Query: 896  STDMRPCASKVRNKASFLLQSTVNR 970
            STD+RP ASKVR KAS+LL S+  R
Sbjct: 434  STDLRPYASKVRTKASYLLHSSTRR 458


>ref|XP_002880950.1| hypothetical protein ARALYDRAFT_481696 [Arabidopsis lyrata subsp.
            lyrata] gi|297326789|gb|EFH57209.1| hypothetical protein
            ARALYDRAFT_481696 [Arabidopsis lyrata subsp. lyrata]
          Length = 456

 Score =  312 bits (799), Expect = 1e-82
 Identities = 160/319 (50%), Positives = 216/319 (67%), Gaps = 1/319 (0%)
 Frame = +2

Query: 2    GQIFLEELLINGWLSELVITCAHVEECITTWTFNLMLYSRNEELRTSASNFWCTVLSHND 181
            G  FLE LL+NGWL+ L++TCA VE+ I  WT N++LYS  E+LR+SA +FWC++L   +
Sbjct: 139  GTTFLEGLLVNGWLTRLILTCARVEKFICKWTLNILLYSSKEDLRSSACDFWCSILLSQN 198

Query: 182  EHGLCSIRIDGFPSYSELKRALEVYGYQLYSSDNFSSLPEMSDADSDSEGPPQNIRCWVK 361
            +     + I   P+Y ELK ALE YG+++  S +     E++DADSDS+GPPQNIR W+ 
Sbjct: 199  KVNGAPVEIYWLPNYQELKEALESYGFRISLSQDV----ELADADSDSQGPPQNIRAWLT 254

Query: 362  FVAVCSQVRSTLPIISNNSEAEELLGAIISFFLDRQLQGLSLLFYECMLAVISSFTDNEW 541
             V  C Q+R   PI S  S+ EE+   ++   LDR L GLSLL  EC+++VI SF + EW
Sbjct: 255  LVTTCCQIRCKNPIFS-TSQVEEIAEILVLLLLDRGLLGLSLLLQECLISVIGSFKEEEW 313

Query: 542  SSSCERVAKSLAISTQKDLNSLRLAECISGVDARSKQLRREVGFQILKKFFNMKVSDGEE 721
             SSC+ +A SLA    +D+N LR+ E +SGVDARSK LR  +  Q+L    + K SD E 
Sbjct: 314  VSSCKEIANSLASRVPQDMNCLRVVESVSGVDARSKHLRSSIAHQMLVVLLDHKDSD-EN 372

Query: 722  ILQQLLAINIKECD-NFSEMYIYLVLTEYWLFSNPLLEEKPYIREMWGVYLRNYSCQIAS 898
            +L  L++IN+KE   N  + YI +VL E WLFS+ L+EEKP +R+MW V+LRN SCQI S
Sbjct: 373  LLSSLMSINVKEKSCNLFKTYISVVLAENWLFSSTLVEEKPVLRDMWAVFLRNCSCQINS 432

Query: 899  TDMRPCASKVRNKASFLLQ 955
            TD+R  ASKVR KA++LLQ
Sbjct: 433  TDLRSYASKVRTKAAYLLQ 451


Top