BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017378
         (918 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281273.1| PREDICTED: exosome complex exonuclease RRP46...   358   1e-96
emb|CBI20856.3| unnamed protein product [Vitis vinifera]              358   1e-96
ref|XP_002324223.1| predicted protein [Populus trichocarpa] gi|2...   349   4e-94
ref|XP_004164036.1| PREDICTED: exosome complex exonuclease RRP46...   338   1e-90
ref|XP_004150286.1| PREDICTED: exosome complex exonuclease RRP46...   336   5e-90

>ref|XP_002281273.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Vitis
           vinifera]
          Length = 245

 Score =  358 bits (918), Expect = 1e-96
 Identities = 177/222 (79%), Positives = 197/222 (88%)
 Frame = -3

Query: 916 NVLNRAHGSARWSQGDTILLAAVYGPKAGTRKNGNPEKASIEVIWKPKTGQIGKEEKEYE 737
           N+LNRAHGSA WSQGDT +LAAVYGPKAGT+KN NPEKA IEV+WKPKTGQIGK EKEYE
Sbjct: 24  NILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKACIEVVWKPKTGQIGKPEKEYE 83

Query: 736 MILERTLQSICLLTVNPNTTTSIILQVVNDDGALLPSAINAASAALVDAGIPLKHLAVAI 557
           +IL+RTL+SICLL +NPNTTTSII+QVV+DDGALLP AINAA AALVDA IPLKHLAVAI
Sbjct: 84  VILKRTLKSICLLNINPNTTTSIIIQVVSDDGALLPCAINAACAALVDAAIPLKHLAVAI 143

Query: 556 SCGLEESGSVLLDPTKLEEQKMKAFAYLVFPNSVASILPEASLQVEGELLEHGMITSVTH 377
            C L ESG V+LDPTK+EEQKMKAFAYLVFPNS  SI+PE S  +EGEL+EHG+ITSVTH
Sbjct: 144 CCCLTESGYVILDPTKVEEQKMKAFAYLVFPNSAISIIPEGSSHMEGELMEHGIITSVTH 203

Query: 376 GVMSVDSYLHCLERGRSASAKMSDFLRRSLQSRVPNDLPKTG 251
           GVMSVD YLHCLERG++AS KMS FLRRSLQS+ PND  + G
Sbjct: 204 GVMSVDDYLHCLERGQAASTKMSAFLRRSLQSQAPNDSSRAG 245


>emb|CBI20856.3| unnamed protein product [Vitis vinifera]
          Length = 243

 Score =  358 bits (918), Expect = 1e-96
 Identities = 177/222 (79%), Positives = 197/222 (88%)
 Frame = -3

Query: 916 NVLNRAHGSARWSQGDTILLAAVYGPKAGTRKNGNPEKASIEVIWKPKTGQIGKEEKEYE 737
           N+LNRAHGSA WSQGDT +LAAVYGPKAGT+KN NPEKA IEV+WKPKTGQIGK EKEYE
Sbjct: 22  NILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKACIEVVWKPKTGQIGKPEKEYE 81

Query: 736 MILERTLQSICLLTVNPNTTTSIILQVVNDDGALLPSAINAASAALVDAGIPLKHLAVAI 557
           +IL+RTL+SICLL +NPNTTTSII+QVV+DDGALLP AINAA AALVDA IPLKHLAVAI
Sbjct: 82  VILKRTLKSICLLNINPNTTTSIIIQVVSDDGALLPCAINAACAALVDAAIPLKHLAVAI 141

Query: 556 SCGLEESGSVLLDPTKLEEQKMKAFAYLVFPNSVASILPEASLQVEGELLEHGMITSVTH 377
            C L ESG V+LDPTK+EEQKMKAFAYLVFPNS  SI+PE S  +EGEL+EHG+ITSVTH
Sbjct: 142 CCCLTESGYVILDPTKVEEQKMKAFAYLVFPNSAISIIPEGSSHMEGELMEHGIITSVTH 201

Query: 376 GVMSVDSYLHCLERGRSASAKMSDFLRRSLQSRVPNDLPKTG 251
           GVMSVD YLHCLERG++AS KMS FLRRSLQS+ PND  + G
Sbjct: 202 GVMSVDDYLHCLERGQAASTKMSAFLRRSLQSQAPNDSSRAG 243


>ref|XP_002324223.1| predicted protein [Populus trichocarpa] gi|222865657|gb|EEF02788.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score =  349 bits (896), Expect = 4e-94
 Identities = 175/220 (79%), Positives = 195/220 (88%)
 Frame = -3

Query: 916 NVLNRAHGSARWSQGDTILLAAVYGPKAGTRKNGNPEKASIEVIWKPKTGQIGKEEKEYE 737
           NVL+RAHGSA WSQGDT +LAAVYGPKAGT+KN NPEKA IEVIWKPKTGQIGK EKE+E
Sbjct: 22  NVLHRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKACIEVIWKPKTGQIGKLEKEFE 81

Query: 736 MILERTLQSICLLTVNPNTTTSIILQVVNDDGALLPSAINAASAALVDAGIPLKHLAVAI 557
           MIL+RTLQSIC+LT+NPNTTTSII+QVVNDDGALL  AINAA AALVDAGIP+KHLAVAI
Sbjct: 82  MILKRTLQSICILTLNPNTTTSIIVQVVNDDGALLVCAINAACAALVDAGIPMKHLAVAI 141

Query: 556 SCGLEESGSVLLDPTKLEEQKMKAFAYLVFPNSVASILPEASLQVEGELLEHGMITSVTH 377
            C L E G V+LDPTKLEEQKM+ F YLVFPNSV S+LPE S  VEGE +EHG+ITSVTH
Sbjct: 142 CCCLAEGGYVILDPTKLEEQKMRGFTYLVFPNSVVSVLPEGSSHVEGEPMEHGIITSVTH 201

Query: 376 GVMSVDSYLHCLERGRSASAKMSDFLRRSLQSRVPNDLPK 257
           GVMSV+ YL CLERGR+AS K+SDFLRRSLQS++P+D  K
Sbjct: 202 GVMSVEEYLKCLERGRAASTKLSDFLRRSLQSQLPSDSSK 241


>ref|XP_004164036.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Cucumis
           sativus]
          Length = 243

 Score =  338 bits (866), Expect = 1e-90
 Identities = 169/222 (76%), Positives = 192/222 (86%)
 Frame = -3

Query: 916 NVLNRAHGSARWSQGDTILLAAVYGPKAGTRKNGNPEKASIEVIWKPKTGQIGKEEKEYE 737
           NVLNRAHGSA WSQGDT +LAAVYGPKAGT+KN NPEKASIEVIWKPKTGQIGK E+E E
Sbjct: 22  NVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECE 81

Query: 736 MILERTLQSICLLTVNPNTTTSIILQVVNDDGALLPSAINAASAALVDAGIPLKHLAVAI 557
           MIL+RTLQSIC+LT NPNTTTSII+QV++DDGALLP AINA+ AALVDAGIPLKHLAVAI
Sbjct: 82  MILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAI 141

Query: 556 SCGLEESGSVLLDPTKLEEQKMKAFAYLVFPNSVASILPEASLQVEGELLEHGMITSVTH 377
           SC L E+G V+LDPTK+EE+KMKA  +LVFPN+  S++PE S Q  GE LEHG+ITSVT 
Sbjct: 142 SCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVTQ 201

Query: 376 GVMSVDSYLHCLERGRSASAKMSDFLRRSLQSRVPNDLPKTG 251
           G MSVD Y+HCLERGR+A+ KMS FLRRSLQ ++P D  K G
Sbjct: 202 GAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG 243


>ref|XP_004150286.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Cucumis
           sativus]
          Length = 243

 Score =  336 bits (861), Expect = 5e-90
 Identities = 168/222 (75%), Positives = 192/222 (86%)
 Frame = -3

Query: 916 NVLNRAHGSARWSQGDTILLAAVYGPKAGTRKNGNPEKASIEVIWKPKTGQIGKEEKEYE 737
           NVLNRAHGSA WSQGDT +LAAVYGPKAGT+KN NPEKASIEVIWKPKTGQIGK E+E E
Sbjct: 22  NVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECE 81

Query: 736 MILERTLQSICLLTVNPNTTTSIILQVVNDDGALLPSAINAASAALVDAGIPLKHLAVAI 557
           MIL+RTLQSIC+LT NPNTTTSII+QV++DDGALLP AINA+ AALVDAGIPLKHLAVAI
Sbjct: 82  MILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAI 141

Query: 556 SCGLEESGSVLLDPTKLEEQKMKAFAYLVFPNSVASILPEASLQVEGELLEHGMITSVTH 377
           SC L E+G V+LDPTK+EE+KMKA  +LVFPN+  S++PE S Q  GE LEHG+ITSVT 
Sbjct: 142 SCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVTQ 201

Query: 376 GVMSVDSYLHCLERGRSASAKMSDFLRRSLQSRVPNDLPKTG 251
           G MSVD Y+HCLERGR+A+ KMS FLRRSLQ ++P +  K G
Sbjct: 202 GAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMNSSKAG 243