BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017377
         (1353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271757.1| PREDICTED: E3 ubiquitin-protein ligase SINA-...   288   2e-75
emb|CAN77431.1| hypothetical protein VITISV_037121 [Vitis vinifera]   283   9e-74
ref|XP_002532642.1| ubiquitin-protein ligase, putative [Ricinus ...   252   2e-64
ref|XP_002327611.1| predicted protein [Populus trichocarpa] gi|2...   251   3e-64
ref|XP_003531068.1| PREDICTED: E3 ubiquitin-protein ligase SINA-...   250   7e-64

>ref|XP_002271757.1| PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 [Vitis vinifera]
          Length = 355

 Score =  288 bits (737), Expect = 2e-75
 Identities = 141/264 (53%), Positives = 185/264 (70%), Gaps = 3/264 (1%)
 Frame = +1

Query: 229  EVIHDANHGDDMESRKEESSGVKVTLMDPDVLDCSICMEHLSPPVFQCENGHIACSKCCT 408
            E + D   G    S     + V V L DP+VLDCSIC+E LS PVFQCENGHIACS CCT
Sbjct: 81   EAVRDPGQGTSSGSEANRDASVSVILTDPEVLDCSICLEPLSVPVFQCENGHIACSSCCT 140

Query: 409  KLRNKCPSCSWPIGYNRCLAIEKVIESIKISCAYQSYGCGETVSFVKKHKHEETCIYAPC 588
            KL N+CPSCSWPIGYNRC AIEKV+ES+K+SC   +YGC ETVS+ KKH HE TC Y PC
Sbjct: 141  KLSNRCPSCSWPIGYNRCRAIEKVLESVKVSCQNTAYGCKETVSYGKKHDHEVTCNYVPC 200

Query: 589  RCPISDCDFRGSLKQMSIHFSAKHSSSGRRFQYN--LPFSVSFGKLESYCVFQGEEDGRL 762
             CP S+C+FRGS KQ++ HF +KH +S  RFQYN   P  + F  ++ +C+ + +E G L
Sbjct: 201  SCPHSNCNFRGSSKQLAQHFRSKHLNSVIRFQYNSFFPVHLEFNAVDKFCILEAKE-GAL 259

Query: 763  FVLNNQIELIGSAITVTCLGPRSSSRGFSYELISRKGGSSLRMQSYTKCFQERPE-ESSS 939
            F++++ I+ +G A+TV  +GPR SSRG ++ L + KG  S+ +QS+T+  +E  E  S S
Sbjct: 260  FIVSSSIQQLGHAVTVCRIGPR-SSRGHAFNLAAWKGDRSIMLQSFTENIREVVELPSLS 318

Query: 940  LEFLLVPYNFYCPDSGKLKLEICI 1011
            + FLL+P N +   SG+LKLE+CI
Sbjct: 319  MGFLLIP-NAFLGSSGQLKLELCI 341


>emb|CAN77431.1| hypothetical protein VITISV_037121 [Vitis vinifera]
          Length = 355

 Score =  283 bits (723), Expect = 9e-74
 Identities = 139/264 (52%), Positives = 183/264 (69%), Gaps = 3/264 (1%)
 Frame = +1

Query: 229  EVIHDANHGDDMESRKEESSGVKVTLMDPDVLDCSICMEHLSPPVFQCENGHIACSKCCT 408
            E + D   G    S     + V V L DP+VLDCSIC+E LS PVFQCENGHIACS CCT
Sbjct: 81   EXVRDPGQGTSSGSEANRDASVSVILTDPEVLDCSICLEPLSVPVFQCENGHIACSSCCT 140

Query: 409  KLRNKCPSCSWPIGYNRCLAIEKVIESIKISCAYQSYGCGETVSFVKKHKHEETCIYAPC 588
            KL N+CPSCSWPIGYNRC AIEKV+ES+K+SC   +YGC ETVS+ KK  HE TC Y PC
Sbjct: 141  KLSNRCPSCSWPIGYNRCRAIEKVLESVKVSCQNTAYGCKETVSYXKKXDHEVTCNYVPC 200

Query: 589  RCPISDCDFRGSLKQMSIHFSAKHSSSGRRFQYN--LPFSVSFGKLESYCVFQGEEDGRL 762
             CP S+C+FRGS KQ++ HF +KH +S  RFQYN   P  + F  ++ +C+ + +E G L
Sbjct: 201  SCPHSNCNFRGSSKQLAQHFRSKHLNSVIRFQYNSFFPVHLEFNAVDKFCILEAKE-GAL 259

Query: 763  FVLNNQIELIGSAITVTCLGPRSSSRGFSYELISRKGGSSLRMQSYTKCFQERPE-ESSS 939
            F++++ I+ +G A+TV  +GPR SSRG ++ L + KG  S+ +QS+T+  +E     S S
Sbjct: 260  FIVSSSIQQLGHAVTVCRIGPR-SSRGHAFNLAAWKGDRSIMLQSFTENIREVVXLPSLS 318

Query: 940  LEFLLVPYNFYCPDSGKLKLEICI 1011
            + FLL+P N +   SG+LKLE+CI
Sbjct: 319  MGFLLIP-NAFLGSSGQLKLELCI 341


>ref|XP_002532642.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223527633|gb|EEF29745.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 374

 Score =  252 bits (643), Expect = 2e-64
 Identities = 123/244 (50%), Positives = 163/244 (66%), Gaps = 1/244 (0%)
 Frame = +1

Query: 283  SSGVKVTLMDPDVLDCSICMEHLSPPVFQCENGHIACSKCCTKLRNKCPSCSWPIGYNRC 462
            ++ + VTL DP+VLDC IC E LS PVFQCENGH ACS CC KL +KCPSCS PIGYNRC
Sbjct: 107  NAAICVTLTDPEVLDCPICYECLSIPVFQCENGHTACSSCCRKLAHKCPSCSLPIGYNRC 166

Query: 463  LAIEKVIESIKISCAYQSYGCGETVSFVKKHKHEETCIYAPCRCPISDCDFRGSLKQMSI 642
             AIEKV+ES+K+ C    YGC E VS+ KK  H++ C  APC CP+S C F GS +Q+  
Sbjct: 167  RAIEKVLESVKLPCHNLKYGCKEMVSYSKKLDHDKICNNAPCSCPLSGCSFVGSSRQLYQ 226

Query: 643  HFSAKHSSSGRRFQYNLPFSVSFGKLESYCVFQGEEDGRLFVLNNQIELIGSAITVTCLG 822
            HFS KH  S   F+YN+ F V F   +   + Q E++G +F L N  E++G+ ITV CLG
Sbjct: 227  HFSIKHKGSAAPFRYNITFPVFFTLNDKSLILQEEKEGVVFFLKNTAEILGNVITVNCLG 286

Query: 823  PRSSSRGFSYELISRKGGSSLRMQSYTKCFQE-RPEESSSLEFLLVPYNFYCPDSGKLKL 999
              SS  G+ YEL +R  GS+L+ QS+TK  Q+   ++  S  FL++P +F+    G++ L
Sbjct: 287  GPSSKGGYFYELAARMEGSNLKFQSFTKNIQKVNHDDPHSDTFLIIPGSFF-GSYGQISL 345

Query: 1000 EICI 1011
            ++CI
Sbjct: 346  DLCI 349


>ref|XP_002327611.1| predicted protein [Populus trichocarpa] gi|222836165|gb|EEE74586.1|
            predicted protein [Populus trichocarpa]
          Length = 372

 Score =  251 bits (641), Expect = 3e-64
 Identities = 116/240 (48%), Positives = 165/240 (68%)
 Frame = +1

Query: 292  VKVTLMDPDVLDCSICMEHLSPPVFQCENGHIACSKCCTKLRNKCPSCSWPIGYNRCLAI 471
            +  TL DP+VLDC IC E L+ PVFQC+NGH ACS CC KL++KCPSC+ PIGYNRC AI
Sbjct: 114  IYATLSDPEVLDCPICCEPLTIPVFQCDNGHTACSSCCIKLQHKCPSCTMPIGYNRCRAI 173

Query: 472  EKVIESIKISCAYQSYGCGETVSFVKKHKHEETCIYAPCRCPISDCDFRGSLKQMSIHFS 651
            EKV+ES+K+SC+  SYGC E++ + KK++H+++C +APC CP+  C+++GS K++  H  
Sbjct: 174  EKVLESLKVSCSNSSYGCKESICYSKKYEHDKSCTHAPCTCPLPACNYQGSSKRLYQHCR 233

Query: 652  AKHSSSGRRFQYNLPFSVSFGKLESYCVFQGEEDGRLFVLNNQIELIGSAITVTCLGPRS 831
             KH      FQ+N  F + F     + V Q E++  LF+L N+ E +G+ ITV+C+GP S
Sbjct: 234  IKHLCDLTSFQFNTSFPLFFMVDHKFRVLQEEKEDVLFILTNRSECLGNVITVSCMGPSS 293

Query: 832  SSRGFSYELISRKGGSSLRMQSYTKCFQERPEESSSLEFLLVPYNFYCPDSGKLKLEICI 1011
            S +G+ YEL ++  GS++R QS T+  Q R +   SL FLLVP N +    G + L++CI
Sbjct: 294  SKQGYFYELTAKAEGSNVRFQSSTRNIQTRVDHPPSLGFLLVP-NDFLGTHGGITLDVCI 352


>ref|XP_003531068.1| PREDICTED: E3 ubiquitin-protein ligase SINA-like 10-like [Glycine
            max]
          Length = 320

 Score =  250 bits (638), Expect = 7e-64
 Identities = 119/242 (49%), Positives = 167/242 (69%)
 Frame = +1

Query: 292  VKVTLMDPDVLDCSICMEHLSPPVFQCENGHIACSKCCTKLRNKCPSCSWPIGYNRCLAI 471
            V + + DPDVLDC IC E L+ PVFQCENGHIACS CC +L NKCP CS PIGYNRC AI
Sbjct: 80   VPIFVSDPDVLDCCICYEPLTSPVFQCENGHIACSICCVRLSNKCPMCSMPIGYNRCRAI 139

Query: 472  EKVIESIKISCAYQSYGCGETVSFVKKHKHEETCIYAPCRCPISDCDFRGSLKQMSIHFS 651
            EKV+E IK+SC   +YGC ET+S+ KK++HE+ CIY PC CP + CDF  S K++ +HFS
Sbjct: 140  EKVLECIKMSCPNANYGCKETLSYSKKNEHEKECIYLPCSCPFTGCDFIASSKELFLHFS 199

Query: 652  AKHSSSGRRFQYNLPFSVSFGKLESYCVFQGEEDGRLFVLNNQIELIGSAITVTCLGPRS 831
             +H  SG +F Y+  F+V     +   V + + DG LFV++N +E +G+ + ++C+GP+S
Sbjct: 200  HRHVGSGTQFTYDKFFTVFLSINQRTVVLKEKSDGNLFVVHNNLEHLGNIVRISCIGPKS 259

Query: 832  SSRGFSYELISRKGGSSLRMQSYTKCFQERPEESSSLEFLLVPYNFYCPDSGKLKLEICI 1011
            ++  F YE+++R  G++L +QS+TK  Q +  ++ S  FLL+P   +   S  LKL+I I
Sbjct: 260  TTE-FQYEVLARHQGNALILQSFTKIVQGQYTDAPSSTFLLIPSCLF--GSPHLKLDIRI 316

Query: 1012 SS 1017
             S
Sbjct: 317  KS 318