BLASTX nr result

ID: Coptis25_contig00017371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017371
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301023.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
ref|XP_003609113.1| Phosphopantothenate-cysteine ligase [Medicag...    82   4e-14
ref|XP_003609080.1| Phosphopantothenate-cysteine ligase [Medicag...    82   4e-14
ref|NP_001047211.1| Os02g0575200 [Oryza sativa Japonica Group] g...    79   3e-13
ref|XP_003526602.1| PREDICTED: phosphopantothenate--cysteine lig...    79   3e-13

>ref|XP_002301023.1| predicted protein [Populus trichocarpa] gi|222842749|gb|EEE80296.1|
           predicted protein [Populus trichocarpa]
          Length = 327

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 52/111 (46%), Positives = 56/111 (50%)
 Frame = -3

Query: 333 DIISFFSSAPPLRDDLNISRKLHEFIERNXXXXXXXXXXXXXXFCILIKSICF*QHCRCM 154
           +I SFF SAPPL+D   I +KL EFIE N                               
Sbjct: 16  EIESFFDSAPPLKDRAGIIKKLKEFIEYNSTPPVN------------------------- 50

Query: 153 CAVFDLVILLTLCTGNGYPRRIVCVTSGGTTVPLEQRCVRYIDNFSSGHRG 1
                         G G PRR+VCVTSGGTTVPLEQRCVRYIDNFSSGHRG
Sbjct: 51  -------------AGKGSPRRVVCVTSGGTTVPLEQRCVRYIDNFSSGHRG 88


>ref|XP_003609113.1| Phosphopantothenate-cysteine ligase [Medicago truncatula]
           gi|355510168|gb|AES91310.1| Phosphopantothenate-cysteine
           ligase [Medicago truncatula]
          Length = 321

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 49/116 (42%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
 Frame = -3

Query: 345 ETLN-DIISFFSSAPPLRDDLNISRKLHEFIERNXXXXXXXXXXXXXXFCILIKSICF*Q 169
           ETL   + +FF SAPPL +   I++KL++FI+RN                          
Sbjct: 8   ETLEAQVKAFFDSAPPLHNSHEITQKLNQFIQRN-------------------------- 41

Query: 168 HCRCMCAVFDLVILLTLCTGNGYPRRIVCVTSGGTTVPLEQRCVRYIDNFSSGHRG 1
                          +  + NG  RRIVCVTSGGTT PLEQRCVRY+DNFSSGHRG
Sbjct: 42  ---------------SSSSENGEARRIVCVTSGGTTAPLEQRCVRYVDNFSSGHRG 82


>ref|XP_003609080.1| Phosphopantothenate-cysteine ligase [Medicago truncatula]
           gi|355510135|gb|AES91277.1| Phosphopantothenate-cysteine
           ligase [Medicago truncatula]
          Length = 331

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 49/116 (42%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
 Frame = -3

Query: 345 ETLN-DIISFFSSAPPLRDDLNISRKLHEFIERNXXXXXXXXXXXXXXFCILIKSICF*Q 169
           ETL   + +FF SAPPL +   I++KL++FI+RN                          
Sbjct: 8   ETLEAQVKAFFDSAPPLHNSHEITQKLNQFIQRN-------------------------- 41

Query: 168 HCRCMCAVFDLVILLTLCTGNGYPRRIVCVTSGGTTVPLEQRCVRYIDNFSSGHRG 1
                          +  + NG  RRIVCVTSGGTT PLEQRCVRY+DNFSSGHRG
Sbjct: 42  ---------------SSSSENGEARRIVCVTSGGTTAPLEQRCVRYVDNFSSGHRG 82


>ref|NP_001047211.1| Os02g0575200 [Oryza sativa Japonica Group]
           gi|50725822|dbj|BAD33352.1| putative chain A, crystal
           structure of phosphopantothenoylcysteine synthetase
           [Oryza sativa Japonica Group]
           gi|113536742|dbj|BAF09125.1| Os02g0575200 [Oryza sativa
           Japonica Group] gi|215697498|dbj|BAG91492.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222623108|gb|EEE57240.1| hypothetical protein
           OsJ_07236 [Oryza sativa Japonica Group]
          Length = 321

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 48/108 (44%), Positives = 54/108 (50%)
 Frame = -3

Query: 324 SFFSSAPPLRDDLNISRKLHEFIERNXXXXXXXXXXXXXXFCILIKSICF*QHCRCMCAV 145
           SFF++APPLRD   ++ +L EFI RN                                  
Sbjct: 10  SFFAAAPPLRDADAVAARLGEFIARNS--------------------------------- 36

Query: 144 FDLVILLTLCTGNGYPRRIVCVTSGGTTVPLEQRCVRYIDNFSSGHRG 1
                  +     G  RRIVCVTSGGTTVPLEQRCVRYIDNFSSGHRG
Sbjct: 37  -------SAAGAGGGGRRIVCVTSGGTTVPLEQRCVRYIDNFSSGHRG 77


>ref|XP_003526602.1| PREDICTED: phosphopantothenate--cysteine ligase 1-like [Glycine
           max]
          Length = 326

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 45/111 (40%), Positives = 58/111 (52%)
 Frame = -3

Query: 333 DIISFFSSAPPLRDDLNISRKLHEFIERNXXXXXXXXXXXXXXFCILIKSICF*QHCRCM 154
           ++ +FF SAPPL+    I++KL++FI+R                                
Sbjct: 18  EVKAFFDSAPPLQKSDEITQKLNQFIQR-------------------------------- 45

Query: 153 CAVFDLVILLTLCTGNGYPRRIVCVTSGGTTVPLEQRCVRYIDNFSSGHRG 1
                    ++  + NG  RRIVCVTSGGTT PLEQRCVRY+DNFSSGHRG
Sbjct: 46  ---------ISSPSANGKVRRIVCVTSGGTTAPLEQRCVRYVDNFSSGHRG 87


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