BLASTX nr result

ID: Coptis25_contig00017369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017369
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266453.1| PREDICTED: uncharacterized protein LOC100243...   228   5e-58
ref|XP_002325333.1| predicted protein [Populus trichocarpa] gi|2...   215   3e-54
ref|NP_001240067.1| uncharacterized protein LOC100814672 [Glycin...   214   6e-54
gb|ACJ86134.1| unknown [Medicago truncatula]                          214   8e-54
ref|XP_002319104.1| predicted protein [Populus trichocarpa] gi|2...   212   2e-53

>ref|XP_002266453.1| PREDICTED: uncharacterized protein LOC100243269 [Vitis vinifera]
           gi|302143637|emb|CBI22390.3| unnamed protein product
           [Vitis vinifera]
          Length = 285

 Score =  228 bits (580), Expect = 5e-58
 Identities = 112/140 (80%), Positives = 123/140 (87%)
 Frame = +2

Query: 56  NPYEVLGVSPVEGFDTIKTAYSRKRKEAERRGDEATANRVHLSFQIERAYDKVMMAQLTN 235
           NPYEVLGVSP+EGFD IK AY+RKRKEAER+GDEATA R      +E+AYDKVMMAQLTN
Sbjct: 65  NPYEVLGVSPIEGFDMIKAAYTRKRKEAERKGDEATAAR------LEKAYDKVMMAQLTN 118

Query: 236 RKKGLTFGSFKVSKDIKYADKQPIVPWGPRFTKSSEQDMHINFGISALFTAWIVIKRSAE 415
           RKKG+TFGSFKVSKDIKYADKQPIVPW PRFTKSS  DM IN  ISA+FTAWI+IKR+AE
Sbjct: 119 RKKGMTFGSFKVSKDIKYADKQPIVPWAPRFTKSSVNDMRINMAISAVFTAWILIKRNAE 178

Query: 416 WKPMQFLAFIFVY*IFEKLK 475
           WKP+QFLAF +VY IFEKLK
Sbjct: 179 WKPLQFLAFAYVYRIFEKLK 198


>ref|XP_002325333.1| predicted protein [Populus trichocarpa] gi|222862208|gb|EEE99714.1|
           predicted protein [Populus trichocarpa]
          Length = 285

 Score =  215 bits (548), Expect = 3e-54
 Identities = 103/140 (73%), Positives = 121/140 (86%)
 Frame = +2

Query: 56  NPYEVLGVSPVEGFDTIKTAYSRKRKEAERRGDEATANRVHLSFQIERAYDKVMMAQLTN 235
           NPYEVLGV+P+EGFD +K AY +KRKEAE++GDEA A       Q+E+AYDK+MMAQL+N
Sbjct: 65  NPYEVLGVNPIEGFDKVKAAYEKKRKEAEKQGDEAAAA------QLEKAYDKLMMAQLSN 118

Query: 236 RKKGLTFGSFKVSKDIKYADKQPIVPWGPRFTKSSEQDMHINFGISALFTAWIVIKRSAE 415
           RKKG+T+GSFKV+KDIKYADKQP+VPWGPRF KSSE DM IN  ISA FTAWI+IKR+AE
Sbjct: 119 RKKGVTYGSFKVAKDIKYADKQPVVPWGPRFAKSSENDMRINLAISAAFTAWILIKRNAE 178

Query: 416 WKPMQFLAFIFVY*IFEKLK 475
           +KP+QFLAF FVY IFEKLK
Sbjct: 179 YKPLQFLAFAFVYRIFEKLK 198


>ref|NP_001240067.1| uncharacterized protein LOC100814672 [Glycine max]
           gi|255638094|gb|ACU19361.1| unknown [Glycine max]
          Length = 282

 Score =  214 bits (545), Expect = 6e-54
 Identities = 103/158 (65%), Positives = 125/158 (79%)
 Frame = +2

Query: 2   VICTXXXXXXXXXXXXXXNPYEVLGVSPVEGFDTIKTAYSRKRKEAERRGDEATANRVHL 181
           +IC               NPYEVLGVSP+E FD +K AY++K+KEAE  GDEATA+R   
Sbjct: 44  IICAAASAAGSSNPDGEFNPYEVLGVSPIEKFDMVKAAYAKKKKEAEMNGDEATASR--- 100

Query: 182 SFQIERAYDKVMMAQLTNRKKGLTFGSFKVSKDIKYADKQPIVPWGPRFTKSSEQDMHIN 361
              +E+AYDK+MMAQL+NRKKG+TFGSFKVSK+IKYADK P++PWGPRFTKSS+ DM IN
Sbjct: 101 ---LEKAYDKLMMAQLSNRKKGVTFGSFKVSKEIKYADKLPVIPWGPRFTKSSQNDMRIN 157

Query: 362 FGISALFTAWIVIKRSAEWKPMQFLAFIFVY*IFEKLK 475
             ISA+FTAWI++KRSAE+KP+QFLAF FVY +FEKLK
Sbjct: 158 LAISAVFTAWILVKRSAEYKPLQFLAFAFVYRLFEKLK 195


>gb|ACJ86134.1| unknown [Medicago truncatula]
          Length = 285

 Score =  214 bits (544), Expect = 8e-54
 Identities = 102/140 (72%), Positives = 120/140 (85%)
 Frame = +2

Query: 56  NPYEVLGVSPVEGFDTIKTAYSRKRKEAERRGDEATANRVHLSFQIERAYDKVMMAQLTN 235
           NPYE+LGVSP+E FDTIK AY++KRKE E +GDE TA+R      +E+AYDKVMMAQL+N
Sbjct: 65  NPYEILGVSPIEKFDTIKAAYTKKRKEVEIKGDEQTASR------LEKAYDKVMMAQLSN 118

Query: 236 RKKGLTFGSFKVSKDIKYADKQPIVPWGPRFTKSSEQDMHINFGISALFTAWIVIKRSAE 415
           RKKG+TFGSFKVSKDIKYADKQP++PWGPRF KSSE DM IN  ISA+FTAWI + +SAE
Sbjct: 119 RKKGVTFGSFKVSKDIKYADKQPVIPWGPRFAKSSENDMRINLAISAVFTAWIAVTQSAE 178

Query: 416 WKPMQFLAFIFVY*IFEKLK 475
           +KP+QFLAF FVY +FEKLK
Sbjct: 179 YKPLQFLAFAFVYRLFEKLK 198


>ref|XP_002319104.1| predicted protein [Populus trichocarpa] gi|222857480|gb|EEE95027.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score =  212 bits (540), Expect = 2e-53
 Identities = 103/140 (73%), Positives = 119/140 (85%)
 Frame = +2

Query: 56  NPYEVLGVSPVEGFDTIKTAYSRKRKEAERRGDEATANRVHLSFQIERAYDKVMMAQLTN 235
           NPYEVLGV+P+EGFD +K AY++KRKEA+  GDE  A       Q+E+AYDK+MMAQL+N
Sbjct: 33  NPYEVLGVNPIEGFDMVKAAYAKKRKEAQIEGDEVAAA------QLEKAYDKLMMAQLSN 86

Query: 236 RKKGLTFGSFKVSKDIKYADKQPIVPWGPRFTKSSEQDMHINFGISALFTAWIVIKRSAE 415
           RKKG+T+GSFKVSKDIKYADKQPIVPWGPRF+KSSE DM IN  IS  FTAWI+IKRSAE
Sbjct: 87  RKKGVTYGSFKVSKDIKYADKQPIVPWGPRFSKSSENDMRINLAISVAFTAWILIKRSAE 146

Query: 416 WKPMQFLAFIFVY*IFEKLK 475
           +KP+QFLAF FVY IFEKLK
Sbjct: 147 YKPLQFLAFAFVYRIFEKLK 166


Top