BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017355
         (722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276803.1| PREDICTED: rRNA-processing protein UTP23 hom...   259   3e-67
ref|XP_002328233.1| predicted protein [Populus trichocarpa] gi|2...   252   5e-65
ref|XP_003545538.1| PREDICTED: rRNA-processing protein UTP23 hom...   243   3e-62
ref|XP_002530196.1| rRNA-processing protein UTP23, putative [Ric...   240   2e-61
ref|XP_003519465.1| PREDICTED: rRNA-processing protein UTP23 hom...   238   9e-61

>ref|XP_002276803.1| PREDICTED: rRNA-processing protein UTP23 homolog [Vitis vinifera]
           gi|296082256|emb|CBI21261.3| unnamed protein product
           [Vitis vinifera]
          Length = 284

 Score =  259 bits (663), Expect = 3e-67
 Identities = 121/194 (62%), Positives = 154/194 (79%)
 Frame = +3

Query: 135 MKVKKQKRHRKAVRFYTACFGFREPYKILCDGTFIHHLLSNQIPLDGHALSNTLGGSTKL 314
           M++KKQKRHRK VRFYTACFGFR+P+K+LCDGTF+HHL+ N I    +A+S  LG   KL
Sbjct: 1   MRLKKQKRHRKIVRFYTACFGFRQPFKVLCDGTFVHHLIVNHISPPDNAVSTILGAPVKL 60

Query: 315 FTTRCVMAELKSLGASYSDSFRAAGSLITARCDHEKRKSAKECIEEVIGEDNSEHFFVAS 494
            TTRCV+AELKSLG SYS+S +AAG LI ARCDHE+RKSA+ C  E+IGE+N EHFFVA+
Sbjct: 61  MTTRCVLAELKSLGDSYSESLKAAGKLIAARCDHERRKSAEACFVEIIGENNPEHFFVAT 120

Query: 495 QDIDLRKKFQEVAGVPVMYGLRNALFLDPPSQSQRKLANEMEEKRLHVTQSEYEVLVKSG 674
           QD DLRKKFQE+ GVPV++GLRNAL L+PPS SQR+     EE+RLH+T+ E+++L K  
Sbjct: 121 QDTDLRKKFQEIPGVPVIFGLRNALLLEPPSVSQRQFVKSSEEERLHMTELEHKLLSKRQ 180

Query: 675 RSNLATETAGDAPD 716
           ++ L ++   D+ D
Sbjct: 181 KNRLTSKETKDSSD 194


>ref|XP_002328233.1| predicted protein [Populus trichocarpa] gi|222837748|gb|EEE76113.1|
           predicted protein [Populus trichocarpa]
          Length = 251

 Score =  252 bits (644), Expect = 5e-65
 Identities = 119/194 (61%), Positives = 151/194 (77%)
 Frame = +3

Query: 135 MKVKKQKRHRKAVRFYTACFGFREPYKILCDGTFIHHLLSNQIPLDGHALSNTLGGSTKL 314
           M+VKKQKRHR+AVRFYTACFGFR+PYK+LCDGTFIHHL+ N I     A+SN LGGS KL
Sbjct: 1   MRVKKQKRHRRAVRFYTACFGFRQPYKVLCDGTFIHHLIVNNIAPADTAISNILGGSVKL 60

Query: 315 FTTRCVMAELKSLGASYSDSFRAAGSLITARCDHEKRKSAKECIEEVIGEDNSEHFFVAS 494
           FTTRCV+AELK LG SY++S +AA +L+ ARCDHE+ K+A+ CI E+IGE+N +HF+V +
Sbjct: 61  FTTRCVLAELKRLGKSYTESLQAANTLMIARCDHEQNKNAEGCIVEIIGENNPDHFYVGT 120

Query: 495 QDIDLRKKFQEVAGVPVMYGLRNALFLDPPSQSQRKLANEMEEKRLHVTQSEYEVLVKSG 674
           QD D+RKKFQEV GVP+++GLRNALFL PPS  QR+ A   EE+R H+T+ E  +L K  
Sbjct: 121 QDTDMRKKFQEVPGVPLIFGLRNALFLQPPSAFQRQFAKNSEEERSHMTEKEVALLKKRT 180

Query: 675 RSNLATETAGDAPD 716
           +  +     GD+ D
Sbjct: 181 KDLVENWEIGDSSD 194


>ref|XP_003545538.1| PREDICTED: rRNA-processing protein UTP23 homolog [Glycine max]
          Length = 285

 Score =  243 bits (620), Expect = 3e-62
 Identities = 118/192 (61%), Positives = 144/192 (75%)
 Frame = +3

Query: 135 MKVKKQKRHRKAVRFYTACFGFREPYKILCDGTFIHHLLSNQIPLDGHALSNTLGGSTKL 314
           MKVKKQKRHRK + FYTACFGFR+PYK+LCDGTF+HHLL N+I     A+ N L  + KL
Sbjct: 1   MKVKKQKRHRKILTFYTACFGFRKPYKVLCDGTFVHHLLVNRITPADTAIGNVLSATIKL 60

Query: 315 FTTRCVMAELKSLGASYSDSFRAAGSLITARCDHEKRKSAKECIEEVIGEDNSEHFFVAS 494
           +TTRCV+AELK LG+SYS++  AA  LI ARC+HEK KSA  CI EV+GE NSEHFFVAS
Sbjct: 61  YTTRCVLAELKRLGSSYSEALEAAHKLIVARCEHEKCKSADACIMEVVGEKNSEHFFVAS 120

Query: 495 QDIDLRKKFQEVAGVPVMYGLRNALFLDPPSQSQRKLANEMEEKRLHVTQSEYEVLVKSG 674
           QD DLRK+ QEV GVP+++GLRNALFL+ PS  QR+     EE RLH+TQ EY++     
Sbjct: 121 QDTDLRKQLQEVPGVPLIFGLRNALFLESPSAFQRQYVKTSEEGRLHMTQKEYQIFKDRV 180

Query: 675 RSNLATETAGDA 710
            + L  E A ++
Sbjct: 181 MNRLTGEEANNS 192


>ref|XP_002530196.1| rRNA-processing protein UTP23, putative [Ricinus communis]
           gi|223530289|gb|EEF32186.1| rRNA-processing protein
           UTP23, putative [Ricinus communis]
          Length = 290

 Score =  240 bits (612), Expect = 2e-61
 Identities = 117/193 (60%), Positives = 146/193 (75%)
 Frame = +3

Query: 135 MKVKKQKRHRKAVRFYTACFGFREPYKILCDGTFIHHLLSNQIPLDGHALSNTLGGSTKL 314
           M+V+KQKRHR+AVRFY  C+GFR+PYKILCDGTF+HHL+ N+I     AL+N LGG  KL
Sbjct: 1   MRVRKQKRHRRAVRFYVTCYGFRQPYKILCDGTFVHHLIVNRIAPADEALANILGGPVKL 60

Query: 315 FTTRCVMAELKSLGASYSDSFRAAGSLITARCDHEKRKSAKECIEEVIGEDNSEHFFVAS 494
           FTTRCV AELK LG SYS+S +AA  L+TARCDHEK KSA+ CI EVIG++N EHFFVA+
Sbjct: 61  FTTRCVHAELKRLGKSYSESLQAAHLLMTARCDHEKVKSAEACILEVIGQNNPEHFFVAT 120

Query: 495 QDIDLRKKFQEVAGVPVMYGLRNALFLDPPSQSQRKLANEMEEKRLHVTQSEYEVLVKSG 674
           QD DLRKKF+EV  VP+++GLRN+L L+PPS  Q       EE+RLH T+ E ++L  + 
Sbjct: 121 QDFDLRKKFREVPAVPLIFGLRNSLHLEPPSAFQHAFVKASEEERLHATELEQKMLKTTT 180

Query: 675 RSNLATETAGDAP 713
           +S L  E   + P
Sbjct: 181 KSILGHEGEIEGP 193


>ref|XP_003519465.1| PREDICTED: rRNA-processing protein UTP23 homolog [Glycine max]
          Length = 285

 Score =  238 bits (607), Expect = 9e-61
 Identities = 116/189 (61%), Positives = 140/189 (74%)
 Frame = +3

Query: 135 MKVKKQKRHRKAVRFYTACFGFREPYKILCDGTFIHHLLSNQIPLDGHALSNTLGGSTKL 314
           MKVKKQKRHRK + FYTACFGFR+P+K+LCDGTF+HHLL N+I     A+ N L  + KL
Sbjct: 1   MKVKKQKRHRKILTFYTACFGFRKPFKVLCDGTFVHHLLVNRITPADTAIGNVLSATVKL 60

Query: 315 FTTRCVMAELKSLGASYSDSFRAAGSLITARCDHEKRKSAKECIEEVIGEDNSEHFFVAS 494
           +TTRCV+AEL  LG+SYS++  AA  LI ARC+HEK KSA  CI EV+G  NSEHFFVAS
Sbjct: 61  YTTRCVLAELNRLGSSYSEALEAAHKLIVARCEHEKCKSADACIMEVVGGKNSEHFFVAS 120

Query: 495 QDIDLRKKFQEVAGVPVMYGLRNALFLDPPSQSQRKLANEMEEKRLHVTQSEYEVLVKSG 674
           QD DLRKK QEV GVP+++GLRNALFL+ PS  QR+     EE RLH+TQ EY++     
Sbjct: 121 QDTDLRKKLQEVPGVPLIFGLRNALFLESPSAFQRQYVKTSEEGRLHMTQKEYQIFKDRV 180

Query: 675 RSNLATETA 701
            + L  E A
Sbjct: 181 MNRLTGEEA 189