BLASTX nr result
ID: Coptis25_contig00017336
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00017336
(1310 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN71397.1| hypothetical protein VITISV_015184 [Vitis vinifera] 248 3e-69
ref|XP_003633637.1| PREDICTED: LOW QUALITY PROTEIN: UDP-N-acetyl... 245 1e-68
ref|XP_002265906.2| PREDICTED: UDP-N-acetylglucosamine transfera... 235 1e-66
ref|XP_002512346.1| UDP-N-acetylglucosamine transferase subunit ... 230 1e-65
ref|XP_004135629.1| PREDICTED: UDP-N-acetylglucosamine transfera... 220 6e-63
>emb|CAN71397.1| hypothetical protein VITISV_015184 [Vitis vinifera]
Length = 169
Score = 248 bits (632), Expect(2) = 3e-69
Identities = 125/142 (88%), Positives = 129/142 (90%)
Frame = +1
Query: 754 RELFNKGYTHLLIQMGRGSFIPTKSAGEDGCLAVDYFTFSSSIADNLKSASLVISHAGSG 933
RELF +GYTHLLIQMGRGS+IPTKS GEDG L VD+FTFSSSIADNL+SASLVISHAGSG
Sbjct: 28 RELFARGYTHLLIQMGRGSYIPTKSTGEDGSLVVDFFTFSSSIADNLRSASLVISHAGSG 87
Query: 934 SIFETLRLRKSLIVVVNEDLMDNHQSELAEELAARKHLFCARPQTLYNTIANMNLEDLLP 1113
SIFETLRLRK LIVVVNEDLMDNHQSELAEELA RKHLFCARPQTLY TIA MNLE LLP
Sbjct: 88 SIFETLRLRKPLIVVVNEDLMDNHQSELAEELAERKHLFCARPQTLYQTIATMNLESLLP 147
Query: 1114 YLPADAKPVAKLINRFLGFADD 1179
Y P DA PVAKLINRFLGF DD
Sbjct: 148 YHPGDAAPVAKLINRFLGFPDD 169
Score = 42.4 bits (98), Expect(2) = 3e-69
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +2
Query: 677 MKMVFVTVGTTSFDALVKAVDTKQVKESYSTKG 775
++ VFVTVGTT FDALVKAVDT + K +G
Sbjct: 2 VRTVFVTVGTTCFDALVKAVDTHEFKRELFARG 34
>ref|XP_003633637.1| PREDICTED: LOW QUALITY PROTEIN: UDP-N-acetylglucosamine transferase
subunit ALG13 homolog [Vitis vinifera]
Length = 178
Score = 245 bits (626), Expect(2) = 1e-68
Identities = 124/142 (87%), Positives = 128/142 (90%)
Frame = +1
Query: 754 RELFNKGYTHLLIQMGRGSFIPTKSAGEDGCLAVDYFTFSSSIADNLKSASLVISHAGSG 933
RELF +GYTHLLIQMGRGS+IPTKS GEDG L VD+FTFSSSIADNL+SASLVISHAGSG
Sbjct: 37 RELFARGYTHLLIQMGRGSYIPTKSTGEDGSLVVDFFTFSSSIADNLRSASLVISHAGSG 96
Query: 934 SIFETLRLRKSLIVVVNEDLMDNHQSELAEELAARKHLFCARPQTLYNTIANMNLEDLLP 1113
SIFETLRLRK LIVVVNEDLMDNHQSELAEELA RKHLFCARPQTLY TIA MNLE LLP
Sbjct: 97 SIFETLRLRKPLIVVVNEDLMDNHQSELAEELAERKHLFCARPQTLYQTIATMNLESLLP 156
Query: 1114 YLPADAKPVAKLINRFLGFADD 1179
Y P DA VAKLINRFLGF DD
Sbjct: 157 YTPGDAAAVAKLINRFLGFPDD 178
Score = 42.7 bits (99), Expect(2) = 1e-68
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +2
Query: 671 RAMKMVFVTVGTTSFDALVKAVDTKQVKESYSTKG 775
+ ++ VFVTVGTT FDALVKAVDT + K +G
Sbjct: 9 KPVRTVFVTVGTTCFDALVKAVDTHEFKRELFARG 43
>ref|XP_002265906.2| PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG13 homolog
[Vitis vinifera] gi|296080958|emb|CBI18624.3| unnamed
protein product [Vitis vinifera]
Length = 178
Score = 235 bits (600), Expect(2) = 1e-66
Identities = 118/142 (83%), Positives = 125/142 (88%)
Frame = +1
Query: 754 RELFNKGYTHLLIQMGRGSFIPTKSAGEDGCLAVDYFTFSSSIADNLKSASLVISHAGSG 933
+EL +GYTHLLIQMGRGS+ P KS GEDG L VDYF FSSSIADNL+SASLVISHAGSG
Sbjct: 37 KELSARGYTHLLIQMGRGSYFPKKSTGEDGSLVVDYFIFSSSIADNLRSASLVISHAGSG 96
Query: 934 SIFETLRLRKSLIVVVNEDLMDNHQSELAEELAARKHLFCARPQTLYNTIANMNLEDLLP 1113
SIFETLRLRK LIVVVNEDLMDNHQSELAEELA RKHLFCA PQTL+ T+A+MNLE LLP
Sbjct: 97 SIFETLRLRKPLIVVVNEDLMDNHQSELAEELAERKHLFCAHPQTLFQTVASMNLESLLP 156
Query: 1114 YLPADAKPVAKLINRFLGFADD 1179
Y P DA PVAKLINRFLGF DD
Sbjct: 157 YHPGDAAPVAKLINRFLGFPDD 178
Score = 45.8 bits (107), Expect(2) = 1e-66
Identities = 21/35 (60%), Positives = 28/35 (80%)
Frame = +2
Query: 671 RAMKMVFVTVGTTSFDALVKAVDTKQVKESYSTKG 775
++ + VFVTVGTT FDALVKAVDT++ K+ S +G
Sbjct: 9 KSERTVFVTVGTTCFDALVKAVDTQEFKKELSARG 43
>ref|XP_002512346.1| UDP-N-acetylglucosamine transferase subunit alg13, putative [Ricinus
communis] gi|223548307|gb|EEF49798.1|
UDP-N-acetylglucosamine transferase subunit alg13,
putative [Ricinus communis]
Length = 178
Score = 230 bits (586), Expect(2) = 1e-65
Identities = 115/142 (80%), Positives = 128/142 (90%)
Frame = +1
Query: 754 RELFNKGYTHLLIQMGRGSFIPTKSAGEDGCLAVDYFTFSSSIADNLKSASLVISHAGSG 933
++LF KGYTHLLIQMGRGS+ PTK+ GEDG LAVDYFTFSSSIAD+L+SASLVISHAGSG
Sbjct: 37 QQLFRKGYTHLLIQMGRGSYTPTKTEGEDGSLAVDYFTFSSSIADHLRSASLVISHAGSG 96
Query: 934 SIFETLRLRKSLIVVVNEDLMDNHQSELAEELAARKHLFCARPQTLYNTIANMNLEDLLP 1113
SIFETLRL+K LIVVVNEDLMDNHQSELAEELA RK+L+CARPQTL++ IA+M+LE LLP
Sbjct: 97 SIFETLRLQKPLIVVVNEDLMDNHQSELAEELAERKYLYCARPQTLHHIIADMDLESLLP 156
Query: 1114 YLPADAKPVAKLINRFLGFADD 1179
Y DA PV KLINRFLGF DD
Sbjct: 157 YSAGDATPVVKLINRFLGFPDD 178
Score = 48.1 bits (113), Expect(2) = 1e-65
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +2
Query: 680 KMVFVTVGTTSFDALVKAVDTKQVKESYSTKG 775
+MVFVTVGTT FDALV+AVDT+QVK+ KG
Sbjct: 12 RMVFVTVGTTLFDALVRAVDTEQVKQQLFRKG 43
>ref|XP_004135629.1| PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG13 homolog
[Cucumis sativus] gi|449526666|ref|XP_004170334.1|
PREDICTED: UDP-N-acetylglucosamine transferase subunit
ALG13 homolog [Cucumis sativus]
Length = 177
Score = 220 bits (560), Expect(2) = 6e-63
Identities = 111/140 (79%), Positives = 124/140 (88%)
Frame = +1
Query: 760 LFNKGYTHLLIQMGRGSFIPTKSAGEDGCLAVDYFTFSSSIADNLKSASLVISHAGSGSI 939
L+ +GYTHLLIQMGRG++ PTKS GEDG L VDYF+FSSSIAD+LKSASLVISHAGSGSI
Sbjct: 39 LYARGYTHLLIQMGRGTYNPTKSHGEDG-LVVDYFSFSSSIADHLKSASLVISHAGSGSI 97
Query: 940 FETLRLRKSLIVVVNEDLMDNHQSELAEELAARKHLFCARPQTLYNTIANMNLEDLLPYL 1119
FETLRL K LIVVVNEDLMDNHQ ELAEELA RKHL+CARPQTL+ TI ++NLE ++PY
Sbjct: 98 FETLRLGKPLIVVVNEDLMDNHQIELAEELAERKHLYCARPQTLHQTIESLNLESIIPYT 157
Query: 1120 PADAKPVAKLINRFLGFADD 1179
P DAKPVA LINRFLGF +D
Sbjct: 158 PGDAKPVAALINRFLGFPED 177
Score = 48.9 bits (115), Expect(2) = 6e-63
Identities = 23/32 (71%), Positives = 28/32 (87%)
Frame = +2
Query: 680 KMVFVTVGTTSFDALVKAVDTKQVKESYSTKG 775
+MVFVTVGTTSFDALV+AVDT+QVK+ +G
Sbjct: 12 RMVFVTVGTTSFDALVRAVDTEQVKQILYARG 43