BLASTX nr result

ID: Coptis25_contig00017328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017328
         (1474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148988.1| PREDICTED: uncharacterized protein LOC101208...   323   9e-86
gb|AFK48098.1| unknown [Medicago truncatula]                          302   1e-79
ref|XP_002518847.1| n-rich protein, putative [Ricinus communis] ...   296   7e-78
ref|XP_002266388.1| PREDICTED: uncharacterized protein LOC100252...   295   3e-77
ref|NP_001239779.1| uncharacterized protein LOC100808989 [Glycin...   292   1e-76

>ref|XP_004148988.1| PREDICTED: uncharacterized protein LOC101208173 [Cucumis sativus]
            gi|449506207|ref|XP_004162682.1| PREDICTED:
            uncharacterized LOC101208173 [Cucumis sativus]
          Length = 371

 Score =  323 bits (827), Expect = 9e-86
 Identities = 180/354 (50%), Positives = 201/354 (56%), Gaps = 82/354 (23%)
 Frame = -3

Query: 1112 LRVQNTNFGNLSINDGIWGSSLTSKKNEERRNFDVRVGGE-----------------RVS 984
            LRVQ  N  NLS+ND IW +S  SK+ EERRNFDVR GGE                 R +
Sbjct: 15   LRVQTGNLANLSLNDSIWSNSYVSKRPEERRNFDVRNGGEVNSLNNFKPKVSDSDVNRFN 74

Query: 983  GGTQNLQPS---------------------------------------KGTNFNGFNDGW 921
             G  + +PS                                       KG++FN FNDGW
Sbjct: 75   DGWNSFKPSVASDLNNWSNTSNSMNLSSTGYEKNALNVFDNGWNSFKSKGSDFNAFNDGW 134

Query: 920  KNEXXXXXXXXXGV---------FHKGVYSKYGXXXXXXXXXXXXXXXXXXXXXXXXXXX 768
            K                      F+KGVYSK G                           
Sbjct: 135  KLNSANMGVDPVIGGAQKGINGGFNKGVYSKIGNFNSNSFVNLKNYKNSGKVEEEKGGKT 194

Query: 767  XXXXXXXV-----------------DKRFKTLPATEALPRNEVVGGYIFVCNNDTMEENL 639
                                     DKRFKTLP +E+LPRNE +GGYIFVCNNDTM+ENL
Sbjct: 195  GKKNSNKNNSGENNNDNKEANKNALDKRFKTLPPSESLPRNETIGGYIFVCNNDTMQENL 254

Query: 638  KRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASFGGTNIDPSAWGDKKCPG 459
            KRQLFGLPPRYRDSVRAITPGLP+FLYNYSTHQLHGIFEAASFGGTNIDP+AW DKK PG
Sbjct: 255  KRQLFGLPPRYRDSVRAITPGLPIFLYNYSTHQLHGIFEAASFGGTNIDPTAWEDKKTPG 314

Query: 458  ESRFPAQVRVATRKVCEPLEEDSFRPILHHYDGPKFRLELNVPEALALLDIFAD 297
            ESRFPAQVR+ TRK+C+PLEEDSFRPILHHYDGPKFRLELN+PEAL+LLDIF +
Sbjct: 315  ESRFPAQVRIVTRKICDPLEEDSFRPILHHYDGPKFRLELNIPEALSLLDIFGE 368


>gb|AFK48098.1| unknown [Medicago truncatula]
          Length = 331

 Score =  302 bits (774), Expect = 1e-79
 Identities = 166/304 (54%), Positives = 189/304 (62%), Gaps = 30/304 (9%)
 Frame = -3

Query: 1112 LRVQNTNFGNLSINDGIWGSSLTSKKNEERRNFDVRVGGERVSGGTQNLQPSKGTN---- 945
            LR Q +N  +LS+ND IW +++T K+ ++RRNFDV+      S    N +PS   N    
Sbjct: 18   LRHQTSNLASLSLNDSIWSTNMT-KRPDQRRNFDVKNSDINNSFTNFNSKPSSDLNDGWK 76

Query: 944  -------------------FNGFNDG-----WKNEXXXXXXXXXGVFHKGVYS--KYGXX 843
                               F GFN G     + N           +   G  S  K G  
Sbjct: 77   MMNNSNGPLFSMPHNNNSSFAGFNKGIYSSPYVNNLNNNTNNLSNINLNGYKSGFKVGDE 136

Query: 842  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDKRFKTLPATEALPRNEVVGGYIFVCN 663
                                             DK+FKTLP +E+LPRNE +GGYIFVCN
Sbjct: 137  FQLGNKGVKKNINNNNNINKKHGDNTDVAKTSADKKFKTLPPSESLPRNETIGGYIFVCN 196

Query: 662  NDTMEENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASFGGTNIDPSA 483
            NDTM ENLKRQ+FGLPPRYRDSVR ITPGLPLFLYNYSTHQLHGIFEAASFGG+NIDP+A
Sbjct: 197  NDTMAENLKRQIFGLPPRYRDSVRTITPGLPLFLYNYSTHQLHGIFEAASFGGSNIDPTA 256

Query: 482  WGDKKCPGESRFPAQVRVATRKVCEPLEEDSFRPILHHYDGPKFRLELNVPEALALLDIF 303
            W DKKCPGESRFPAQV+V TRKVCEPLEEDSFRPILHHYDGPKFRLEL+V EAL+LLDIF
Sbjct: 257  WEDKKCPGESRFPAQVQVITRKVCEPLEEDSFRPILHHYDGPKFRLELSVSEALSLLDIF 316

Query: 302  ADTN 291
            AD N
Sbjct: 317  ADQN 320


>ref|XP_002518847.1| n-rich protein, putative [Ricinus communis]
           gi|223541834|gb|EEF43380.1| n-rich protein, putative
           [Ricinus communis]
          Length = 396

 Score =  296 bits (759), Expect = 7e-78
 Identities = 137/152 (90%), Positives = 145/152 (95%)
 Frame = -3

Query: 743 DKRFKTLPATEALPRNEVVGGYIFVCNNDTMEENLKRQLFGLPPRYRDSVRAITPGLPLF 564
           DKRFKTLP +E+LPRNE VGGYIFVCNNDTM+ENLKRQLFGLPPRYRDSVRAITPGLPLF
Sbjct: 245 DKRFKTLPPSESLPRNETVGGYIFVCNNDTMQENLKRQLFGLPPRYRDSVRAITPGLPLF 304

Query: 563 LYNYSTHQLHGIFEAASFGGTNIDPSAWGDKKCPGESRFPAQVRVATRKVCEPLEEDSFR 384
           LYNYSTHQLHGIFEAASFGGTNIDP+AW DKKCPGESRFPAQVRV TRK+CEPLEEDSFR
Sbjct: 305 LYNYSTHQLHGIFEAASFGGTNIDPTAWEDKKCPGESRFPAQVRVVTRKICEPLEEDSFR 364

Query: 383 PILHHYDGPKFRLELNVPEALALLDIFADTNP 288
           PILHHYDGPKFRLELN+PE L+LLDIF + NP
Sbjct: 365 PILHHYDGPKFRLELNIPEVLSLLDIFDEQNP 396



 Score = 74.7 bits (182), Expect = 6e-11
 Identities = 35/65 (53%), Positives = 44/65 (67%)
 Frame = -3

Query: 1112 LRVQNTNFGNLSINDGIWGSSLTSKKNEERRNFDVRVGGERVSGGTQNLQPSKGTNFNGF 933
            LRVQ +N  NLS+ND IW +S  SK+ +ERRNFD+RVGGE V+         KG++ NG 
Sbjct: 15   LRVQTSNLANLSLNDSIWSNSYGSKRPDERRNFDIRVGGE-VNNSAPTATKLKGSDLNGL 73

Query: 932  NDGWK 918
            ND WK
Sbjct: 74   NDDWK 78


>ref|XP_002266388.1| PREDICTED: uncharacterized protein LOC100252953 [Vitis vinifera]
          Length = 389

 Score =  295 bits (754), Expect = 3e-77
 Identities = 135/152 (88%), Positives = 145/152 (95%)
 Frame = -3

Query: 743 DKRFKTLPATEALPRNEVVGGYIFVCNNDTMEENLKRQLFGLPPRYRDSVRAITPGLPLF 564
           DKRFKTLP +E+LPRNE VGGYIFVCNNDTM+ENLKRQLFGLPPRYRDSVRAITPGLPLF
Sbjct: 238 DKRFKTLPPSESLPRNETVGGYIFVCNNDTMQENLKRQLFGLPPRYRDSVRAITPGLPLF 297

Query: 563 LYNYSTHQLHGIFEAASFGGTNIDPSAWGDKKCPGESRFPAQVRVATRKVCEPLEEDSFR 384
           LYNYSTHQLHG+FEAASFGGTNIDP+AW DKKCPGESRFPAQVRV TRK+CEP+EEDSFR
Sbjct: 298 LYNYSTHQLHGVFEAASFGGTNIDPTAWEDKKCPGESRFPAQVRVVTRKICEPMEEDSFR 357

Query: 383 PILHHYDGPKFRLELNVPEALALLDIFADTNP 288
           P+LHHYDGPKFRLELNVPEAL+LLDIF +  P
Sbjct: 358 PVLHHYDGPKFRLELNVPEALSLLDIFNEKTP 389



 Score = 60.8 bits (146), Expect = 9e-07
 Identities = 32/62 (51%), Positives = 41/62 (66%)
 Frame = -3

Query: 1112 LRVQNTNFGNLSINDGIWGSSLTSKKNEERRNFDVRVGGERVSGGTQNLQPSKGTNFNGF 933
            LRVQ +N  NLS+N+ IW S  T K+ +ERRNFD+RVGGE  +G +      KG +FNG 
Sbjct: 15   LRVQTSNLANLSLNESIWSSPYT-KRQDERRNFDIRVGGEINTGSSLK---QKGLDFNGG 70

Query: 932  ND 927
             D
Sbjct: 71   YD 72


>ref|NP_001239779.1| uncharacterized protein LOC100808989 [Glycine max]
           gi|255637142|gb|ACU18902.1| unknown [Glycine max]
          Length = 330

 Score =  292 bits (748), Expect = 1e-76
 Identities = 137/149 (91%), Positives = 143/149 (95%)
 Frame = -3

Query: 743 DKRFKTLPATEALPRNEVVGGYIFVCNNDTMEENLKRQLFGLPPRYRDSVRAITPGLPLF 564
           DKRFKTLP +E+LPR+E +GGYIFVCNNDTM ENLKRQLFGLPPRYRDSVRAITPGLPLF
Sbjct: 169 DKRFKTLPPSESLPRDETIGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLF 228

Query: 563 LYNYSTHQLHGIFEAASFGGTNIDPSAWGDKKCPGESRFPAQVRVATRKVCEPLEEDSFR 384
           LYNYSTHQLHGIFEAASFGGTNIDPSAW DKKCPGESRFPAQVRV TRK CEPLEEDSFR
Sbjct: 229 LYNYSTHQLHGIFEAASFGGTNIDPSAWEDKKCPGESRFPAQVRVITRKTCEPLEEDSFR 288

Query: 383 PILHHYDGPKFRLELNVPEALALLDIFAD 297
           PILHHYDGPKFRLELNVPEAL+LLDIFA+
Sbjct: 289 PILHHYDGPKFRLELNVPEALSLLDIFAE 317


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