BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017326
         (1105 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32131.3| unnamed protein product [Vitis vinifera]              217   5e-54
ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   217   5e-54
ref|XP_004170207.1| PREDICTED: LOW QUALITY PROTEIN: U4/U6 small ...   205   2e-50
ref|XP_004135478.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   205   2e-50
ref|XP_002525342.1| U4/U6 small nuclear ribonucleoprotein Prp31,...   202   1e-49

>emb|CBI32131.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score =  217 bits (552), Expect = 5e-54
 Identities = 117/185 (63%), Positives = 139/185 (75%), Gaps = 5/185 (2%)
 Frame = -1

Query: 541 MMKKVEDKLENKGNMSDLG---DDNLEYKLIVECNALYADIDNEIVTVHNFIRSHYRHKF 371
           +M+KVED LE   +MS+ G   +D+ EY+LIV+CNAL  DI+NEIV +HNFIR +YR KF
Sbjct: 105 IMQKVEDALEKGSDMSNHGIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDNYRLKF 164

Query: 370 TELESLVPHPVDYARVVKKIGNETDLTLVDLQGLLPSNSIM--AVIASTTSGKLLPEENL 197
            ELESLV HP+DYARVVKKIGNE DLTLVDL+GLLPS  IM  +V ASTTSGK LPEENL
Sbjct: 165 PELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENL 224

Query: 196 KKTIDACDCILSLDLGKNKVLEFLESILGYVAPNLAVLVGSXXXXXXXXXXXXXXXXAKM 17
           KKT+DACD  L+LDL K KVL+F+ES +GY+APNL+ +VGS                AKM
Sbjct: 225 KKTVDACDRALALDLAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLTALAKM 284

Query: 16  PACKV 2
           PAC V
Sbjct: 285 PACNV 289


>ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like [Vitis
           vinifera]
          Length = 489

 Score =  217 bits (552), Expect = 5e-54
 Identities = 117/185 (63%), Positives = 139/185 (75%), Gaps = 5/185 (2%)
 Frame = -1

Query: 541 MMKKVEDKLENKGNMSDLG---DDNLEYKLIVECNALYADIDNEIVTVHNFIRSHYRHKF 371
           +M+KVED LE   +MS+ G   +D+ EY+LIV+CNAL  DI+NEIV +HNFIR +YR KF
Sbjct: 71  IMQKVEDALEKGSDMSNHGIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDNYRLKF 130

Query: 370 TELESLVPHPVDYARVVKKIGNETDLTLVDLQGLLPSNSIM--AVIASTTSGKLLPEENL 197
            ELESLV HP+DYARVVKKIGNE DLTLVDL+GLLPS  IM  +V ASTTSGK LPEENL
Sbjct: 131 PELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENL 190

Query: 196 KKTIDACDCILSLDLGKNKVLEFLESILGYVAPNLAVLVGSXXXXXXXXXXXXXXXXAKM 17
           KKT+DACD  L+LDL K KVL+F+ES +GY+APNL+ +VGS                AKM
Sbjct: 191 KKTVDACDRALALDLAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLTALAKM 250

Query: 16  PACKV 2
           PAC V
Sbjct: 251 PACNV 255


>ref|XP_004170207.1| PREDICTED: LOW QUALITY PROTEIN: U4/U6 small nuclear
           ribonucleoprotein Prp31-like [Cucumis sativus]
          Length = 484

 Score =  205 bits (521), Expect = 2e-50
 Identities = 112/185 (60%), Positives = 134/185 (72%), Gaps = 5/185 (2%)
 Frame = -1

Query: 541 MMKKVEDKLENKGNMSDLG---DDNLEYKLIVECNALYADIDNEIVTVHNFIRSHYRHKF 371
           +M+KVED L+   N+S+ G   +D+ EY+LIVECNAL  DI+NEI+ +HNFIR  YR KF
Sbjct: 66  IMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDKYRLKF 125

Query: 370 TELESLVPHPVDYARVVKKIGNETDLTLVDLQGLLPSNSIM--AVIASTTSGKLLPEENL 197
            ELESLV HP+DYARVVKKIGNE DLTLVDL+GLLPS  IM  +V ASTTSGK LPEE L
Sbjct: 126 PELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPLPEEIL 185

Query: 196 KKTIDACDCILSLDLGKNKVLEFLESILGYVAPNLAVLVGSXXXXXXXXXXXXXXXXAKM 17
           +KTIDACD  L+LD  K  VL F+ES +G++APNL+ +VGS                AKM
Sbjct: 186 QKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLAALAKM 245

Query: 16  PACKV 2
           PAC V
Sbjct: 246 PACNV 250


>ref|XP_004135478.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like
           [Cucumis sativus]
          Length = 476

 Score =  205 bits (521), Expect = 2e-50
 Identities = 112/185 (60%), Positives = 134/185 (72%), Gaps = 5/185 (2%)
 Frame = -1

Query: 541 MMKKVEDKLENKGNMSDLG---DDNLEYKLIVECNALYADIDNEIVTVHNFIRSHYRHKF 371
           +M+KVED L+   N+S+ G   +D+ EY+LIVECNAL  DI+NEI+ +HNFIR  YR KF
Sbjct: 58  IMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDKYRLKF 117

Query: 370 TELESLVPHPVDYARVVKKIGNETDLTLVDLQGLLPSNSIM--AVIASTTSGKLLPEENL 197
            ELESLV HP+DYARVVKKIGNE DLTLVDL+GLLPS  IM  +V ASTTSGK LPEE L
Sbjct: 118 PELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPLPEEIL 177

Query: 196 KKTIDACDCILSLDLGKNKVLEFLESILGYVAPNLAVLVGSXXXXXXXXXXXXXXXXAKM 17
           +KTIDACD  L+LD  K  VL F+ES +G++APNL+ +VGS                AKM
Sbjct: 178 QKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLAALAKM 237

Query: 16  PACKV 2
           PAC V
Sbjct: 238 PACNV 242


>ref|XP_002525342.1| U4/U6 small nuclear ribonucleoprotein Prp31, putative [Ricinus
           communis] gi|223535305|gb|EEF36980.1| U4/U6 small
           nuclear ribonucleoprotein Prp31, putative [Ricinus
           communis]
          Length = 774

 Score =  202 bits (514), Expect = 1e-49
 Identities = 111/185 (60%), Positives = 133/185 (71%), Gaps = 5/185 (2%)
 Frame = -1

Query: 541 MMKKVEDKLENKGNMSDLG---DDNLEYKLIVECNALYADIDNEIVTVHNFIRSHYRHKF 371
           +M+KVE  LE   + SD G   +D+ EY+LIV+CNAL  DI+NEI+ +HNFIR  YR KF
Sbjct: 383 IMQKVEGALEKGSDESDHGIVLEDDPEYQLIVDCNALSVDIENEIIIIHNFIRDKYRLKF 442

Query: 370 TELESLVPHPVDYARVVKKIGNETDLTLVDLQGLLPSNSIM--AVIASTTSGKLLPEENL 197
            ELESLV HP+DYARVVKKIGNE DLTLVDL+GLLPS  IM  +V ASTTSGK L EE L
Sbjct: 443 PELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLSEEVL 502

Query: 196 KKTIDACDCILSLDLGKNKVLEFLESILGYVAPNLAVLVGSXXXXXXXXXXXXXXXXAKM 17
           +KT+DACD  L+LD  K KVL+F+ES +GY+APNL+ +VGS                AKM
Sbjct: 503 QKTVDACDRALALDTAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLSALAKM 562

Query: 16  PACKV 2
           PAC V
Sbjct: 563 PACNV 567