BLASTX nr result

ID: Coptis25_contig00017311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017311
         (1428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77023.1| hypothetical protein VITISV_015334 [Vitis vinifera]   597   e-168
ref|XP_002284823.2| PREDICTED: amidase 1-like [Vitis vinifera] g...   594   e-167
ref|XP_002512364.1| amidase, putative [Ricinus communis] gi|2235...   574   e-161
ref|XP_002319550.1| amidase family protein [Populus trichocarpa]...   558   e-156
ref|XP_003556503.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...   552   e-155

>emb|CAN77023.1| hypothetical protein VITISV_015334 [Vitis vinifera]
          Length = 433

 Score =  597 bits (1538), Expect = e-168
 Identities = 295/435 (67%), Positives = 345/435 (79%), Gaps = 1/435 (0%)
 Frame = +3

Query: 15   MAKNSDFGAFMEKFTLLPPKTSSPQQLPLSGLTFAVKDIFDVKGYVTGFGNPDWARTHNX 194
            MAK SD+GAFME+F L P  +SS  +LPL+GLTFAVKDIFDV GYVTGFGNPDWARTH  
Sbjct: 1    MAKASDYGAFMERFILQP--SSSSHELPLNGLTFAVKDIFDVDGYVTGFGNPDWARTHQA 58

Query: 195  XXXXXXXXXXXXNGGATCVGKTVMDEMAYSINGENEHYGTPTNPCAPDRVPXXXXXXXXX 374
                         GGATCVGKTVMDEMAYSINGEN+HYGTPTNP APDRVP         
Sbjct: 59   AMLTAPSVLAVLKGGATCVGKTVMDEMAYSINGENKHYGTPTNPQAPDRVPGGSSSGSAV 118

Query: 375  XXXXELVDFSLGTDTGGSTRVPASYCAIFGFRPSHAVVSTTGVIPMAQSFDTVGWFARDP 554
                 LVDFSLGTDTGGS RVPASYC IFG RPSH VVSTTGVIPMAQSFDTVGWFARDP
Sbjct: 119  AVGAMLVDFSLGTDTGGSVRVPASYCGIFGIRPSHGVVSTTGVIPMAQSFDTVGWFARDP 178

Query: 555  VILNKVGRVLLQLPYVEPVQPRHVVIPNDCFQLLSILSDRLAQIIIESVEKLYGSQVVKH 734
             ILN+VG VLL  P V PV+P  ++IP DCF+LLSI  DR+ Q++I+SVEKL+GS +VKH
Sbjct: 179  EILNRVGHVLLPFPDVNPVKPSQIIIPEDCFRLLSIPIDRVTQVLIKSVEKLFGSDIVKH 238

Query: 735  VNLGDYVSERVPSLEHFIDESNRHQEY-IPSLIALSSAMRCLQRYEFKTNHGKWVTTVKP 911
            V+LGDYV ++V SL+ F+ + N+ QEY IPSL ALS+AMR LQRYEFK NHG+WV  V+P
Sbjct: 239  VSLGDYVEDKVTSLKPFMSKENQTQEYNIPSLAALSTAMRLLQRYEFKNNHGEWVRAVQP 298

Query: 912  NLGPGISERVLEAINSTDEHIDTCHLVKTELRTALNSLLEEFGILAIPTVPGPPPKLRTQ 1091
            +LGPGI ERV EA+ +TDE ID C  +KTE R+AL  LL + G+L +PTVPGPPPKL+T 
Sbjct: 299  DLGPGIRERVWEALGTTDEKIDVCQSLKTEFRSALTDLLGDSGVLVLPTVPGPPPKLQTD 358

Query: 1092 VSLLETFRARAFSLLSIAGVSGFCQVNIPLGMYDGFPISISLIAKHGADAFLLNIAETLY 1271
             + LE+FRARAFSLLSIAGVSGFCQV+IPLG+YD  P+++SL+AKHG+D FLLN+ +TLY
Sbjct: 359  PTTLESFRARAFSLLSIAGVSGFCQVSIPLGLYDNLPVAVSLLAKHGSDGFLLNLVQTLY 418

Query: 1272 INLKQQVEVAEKHRY 1316
             ++K+QVEVAEK  Y
Sbjct: 419  GSIKEQVEVAEKTSY 433


>ref|XP_002284823.2| PREDICTED: amidase 1-like [Vitis vinifera]
            gi|296088312|emb|CBI36757.3| unnamed protein product
            [Vitis vinifera]
          Length = 433

 Score =  594 bits (1532), Expect = e-167
 Identities = 294/435 (67%), Positives = 345/435 (79%), Gaps = 1/435 (0%)
 Frame = +3

Query: 15   MAKNSDFGAFMEKFTLLPPKTSSPQQLPLSGLTFAVKDIFDVKGYVTGFGNPDWARTHNX 194
            MAK S++GAFME+F L P  +SS  +LPL+GLTFAVKDIFDV GYVTGFGNPDWARTH  
Sbjct: 1    MAKASNYGAFMERFILQP--SSSSHELPLNGLTFAVKDIFDVDGYVTGFGNPDWARTHQA 58

Query: 195  XXXXXXXXXXXXNGGATCVGKTVMDEMAYSINGENEHYGTPTNPCAPDRVPXXXXXXXXX 374
                         GGATCVGKTVMDEMAYSINGEN+HYGTPTNP APDRVP         
Sbjct: 59   AMLTAPSVLAVLKGGATCVGKTVMDEMAYSINGENKHYGTPTNPQAPDRVPGGSSSGSAV 118

Query: 375  XXXXELVDFSLGTDTGGSTRVPASYCAIFGFRPSHAVVSTTGVIPMAQSFDTVGWFARDP 554
                 LVDFSLGTDTGGS RVPASYC IFG RPSH VVSTTGVIPMAQSFDTVGWFARDP
Sbjct: 119  AVGAMLVDFSLGTDTGGSVRVPASYCGIFGIRPSHGVVSTTGVIPMAQSFDTVGWFARDP 178

Query: 555  VILNKVGRVLLQLPYVEPVQPRHVVIPNDCFQLLSILSDRLAQIIIESVEKLYGSQVVKH 734
             ILN+VG VLL  P V PV+P  ++IP DCF+LLSI  DR+ Q++I+SVEKL+GS +VKH
Sbjct: 179  EILNRVGHVLLPFPDVNPVKPSQIIIPEDCFRLLSIPIDRVTQVLIKSVEKLFGSDIVKH 238

Query: 735  VNLGDYVSERVPSLEHFIDESNRHQEY-IPSLIALSSAMRCLQRYEFKTNHGKWVTTVKP 911
            V+LGDYV ++V SL+ F+ + N+ QEY IPSL ALS+AMR LQRYEFK NHG+WV  V+P
Sbjct: 239  VSLGDYVEDKVTSLKPFMSKENQTQEYNIPSLAALSTAMRLLQRYEFKNNHGEWVREVQP 298

Query: 912  NLGPGISERVLEAINSTDEHIDTCHLVKTELRTALNSLLEEFGILAIPTVPGPPPKLRTQ 1091
            +LGPGI ERV EA+ +TDE ID C  +KTE R+AL  LL + G+L +PTVPGPPPKL+T 
Sbjct: 299  DLGPGIRERVWEALGTTDEKIDVCQSLKTEFRSALTDLLGDSGVLVLPTVPGPPPKLQTD 358

Query: 1092 VSLLETFRARAFSLLSIAGVSGFCQVNIPLGMYDGFPISISLIAKHGADAFLLNIAETLY 1271
             + LE+FRARAFSLLSIAGVSGFCQV+IPLG+YD  P+++SL+AKHG+D FLLN+ +TLY
Sbjct: 359  PTTLESFRARAFSLLSIAGVSGFCQVSIPLGLYDNLPVAVSLLAKHGSDGFLLNLVQTLY 418

Query: 1272 INLKQQVEVAEKHRY 1316
             ++K+QVEVAEK  Y
Sbjct: 419  GSIKEQVEVAEKTSY 433


>ref|XP_002512364.1| amidase, putative [Ricinus communis] gi|223548325|gb|EEF49816.1|
            amidase, putative [Ricinus communis]
          Length = 500

 Score =  574 bits (1480), Expect = e-161
 Identities = 284/428 (66%), Positives = 333/428 (77%), Gaps = 1/428 (0%)
 Frame = +3

Query: 12   NMAKNSDFGAFMEKFTLLPPKTSSPQQLPLSGLTFAVKDIFDVKGYVTGFGNPDWARTHN 191
            +MA + D+GAFMEKF L P  +SS  QLPL  LTFAVKDIFDV GYVTGFGNPDWARTH+
Sbjct: 72   DMAISPDYGAFMEKFVLKP--SSSSDQLPLHSLTFAVKDIFDVDGYVTGFGNPDWARTHS 129

Query: 192  XXXXXXXXXXXXXNGGATCVGKTVMDEMAYSINGENEHYGTPTNPCAPDRVPXXXXXXXX 371
                          GGATCVGK +MDEMAYSINGEN HYGTPTNP APDRVP        
Sbjct: 130  AATATAPAVLAVLRGGATCVGKVIMDEMAYSINGENAHYGTPTNPSAPDRVPGGSSSGSA 189

Query: 372  XXXXXELVDFSLGTDTGGSTRVPASYCAIFGFRPSHAVVSTTGVIPMAQSFDTVGWFARD 551
                 +LVDFSLG+DTGGS RVPASYC I GFRPSH VVS +GVIPMAQSFDTVGWF+R+
Sbjct: 190  VAVGAKLVDFSLGSDTGGSVRVPASYCGILGFRPSHGVVSVSGVIPMAQSFDTVGWFSRN 249

Query: 552  PVILNKVGRVLLQLPYVEPVQPRHVVIPNDCFQLLSILSDRLAQIIIESVEKLYGSQVVK 731
            PVIL  VGR+LLQLP V+  +P  + I  DCFQL SI   R++Q++++SVEKL+G  +VK
Sbjct: 250  PVILKHVGRLLLQLPDVDRTKPNQIFIAEDCFQLSSIPKKRVSQVLVKSVEKLFGGDIVK 309

Query: 732  HVNLGDYVSERVPSLEHFIDESNRHQEY-IPSLIALSSAMRCLQRYEFKTNHGKWVTTVK 908
            HVNLGDYV ++VPSL HF+ +  + QEY I  L ALSSAMR LQRYEFKTNHG+WVTTVK
Sbjct: 310  HVNLGDYVEDKVPSLRHFMSKEIKEQEYNIAPLAALSSAMRMLQRYEFKTNHGEWVTTVK 369

Query: 909  PNLGPGISERVLEAINSTDEHIDTCHLVKTELRTALNSLLEEFGILAIPTVPGPPPKLRT 1088
            P+ GPG+ ER+ EA+ ST+E+ID    V+TELR AL +LLEEFGI+AIPTVPG PPKL T
Sbjct: 370  PDFGPGLKERIWEAVRSTEENIDAFQSVRTELRAALTNLLEEFGIIAIPTVPGVPPKLNT 429

Query: 1089 QVSLLETFRARAFSLLSIAGVSGFCQVNIPLGMYDGFPISISLIAKHGADAFLLNIAETL 1268
              + LE FRA+AFSLLSI GVSGFCQV+IPLGM+DG P+SISL+AKHG+D FLLN+ ETL
Sbjct: 430  DPTTLEIFRAKAFSLLSITGVSGFCQVSIPLGMHDGLPVSISLLAKHGSDVFLLNVVETL 489

Query: 1269 YINLKQQV 1292
            Y  L+++V
Sbjct: 490  YDTLQEEV 497


>ref|XP_002319550.1| amidase family protein [Populus trichocarpa]
            gi|222857926|gb|EEE95473.1| amidase family protein
            [Populus trichocarpa]
          Length = 427

 Score =  558 bits (1438), Expect = e-156
 Identities = 273/432 (63%), Positives = 331/432 (76%), Gaps = 1/432 (0%)
 Frame = +3

Query: 15   MAKNSDFGAFMEKFTLLPPKTSSPQQLPLSGLTFAVKDIFDVKGYVTGFGNPDWARTHNX 194
            M ++ D+GAFM+KF L P  TSS    PL GLTFAVKD+   +GYVTGFG+PDWARTH+ 
Sbjct: 1    MERDPDYGAFMDKFVLEP--TSSAHDQPLHGLTFAVKDM---EGYVTGFGHPDWARTHSA 55

Query: 195  XXXXXXXXXXXXNGGATCVGKTVMDEMAYSINGENEHYGTPTNPCAPDRVPXXXXXXXXX 374
                         GGATCVGKT+MDEMAYSINGEN HYGTP NPCAPDRVP         
Sbjct: 56   ATSTAPAVLAVLRGGATCVGKTIMDEMAYSINGENIHYGTPINPCAPDRVPGGSSSGSAV 115

Query: 375  XXXXELVDFSLGTDTGGSTRVPASYCAIFGFRPSHAVVSTTGVIPMAQSFDTVGWFARDP 554
                ++VDFSLGTDTGGS RVPASYC I GFRPSH  V + GVIPMAQSFDTVGWFARDP
Sbjct: 116  AVGAKIVDFSLGTDTGGSVRVPASYCGILGFRPSHDAVPSAGVIPMAQSFDTVGWFARDP 175

Query: 555  VILNKVGRVLLQLPYVEPVQPRHVVIPNDCFQLLSILSDRLAQIIIESVEKLYGSQVVKH 734
            VIL++VG +LLQ P ++P++P  V+I  DCFQL +I +DRL Q++++SVEK+YG  ++KH
Sbjct: 176  VILSRVGHILLQSPVMDPIKPSQVIIAEDCFQLSNIPNDRLGQVLVKSVEKIYGGHILKH 235

Query: 735  VNLGDYVSERVPSLEHFIDESNRHQEY-IPSLIALSSAMRCLQRYEFKTNHGKWVTTVKP 911
              LGDYV E+VPSL+HF+    +  E+ IPSL ALS+AMR L+RYEFK NHG+W+T VKP
Sbjct: 236  TVLGDYVKEKVPSLKHFMSNEIKELEHNIPSLAALSNAMRSLERYEFKDNHGEWITAVKP 295

Query: 912  NLGPGISERVLEAINSTDEHIDTCHLVKTELRTALNSLLEEFGILAIPTVPGPPPKLRTQ 1091
             LGP ISERV EA+ +T E++D CH VKTEL  AL +LL++FGILAIPTV G PPKL+  
Sbjct: 296  ELGPAISERVWEAVRTTGENVDACHSVKTELHAALATLLQDFGILAIPTVSGLPPKLQAD 355

Query: 1092 VSLLETFRARAFSLLSIAGVSGFCQVNIPLGMYDGFPISISLIAKHGADAFLLNIAETLY 1271
             + L+ FRA+AF LLSIAGVSGFCQV+IPLGMYD  P+S+SL+AK G+DAFLLN+ E+LY
Sbjct: 356  PTTLKIFRAKAFGLLSIAGVSGFCQVSIPLGMYDNLPVSVSLLAKQGSDAFLLNVVESLY 415

Query: 1272 INLKQQVEVAEK 1307
              LK+QVE+ EK
Sbjct: 416  GTLKEQVEITEK 427


>ref|XP_003556503.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
            [Glycine max]
          Length = 433

 Score =  552 bits (1422), Expect = e-155
 Identities = 278/435 (63%), Positives = 329/435 (75%), Gaps = 2/435 (0%)
 Frame = +3

Query: 15   MAKNSDFGAFMEKFTLLPPKTSSPQQLPLSGLTFAVKDIFDVKGYVTGFGNPDWARTHNX 194
            M   SD+GAFMEKFTL P   +S   LPL+ LTFAVK+IFDV+GYVTGFGNPDWARTH  
Sbjct: 1    METASDYGAFMEKFTLPP---NSAPSLPLNSLTFAVKEIFDVEGYVTGFGNPDWARTHTV 57

Query: 195  XXXXXXXXXXXXNGGATCVGKTVMDEMAYSINGENEHYGTPTNPCAPDRVPXXXXXXXXX 374
                          GATCVGKTVMDEMAYSINGEN HYGTP NPCAPDRVP         
Sbjct: 58   ATSTAPTVLALLRAGATCVGKTVMDEMAYSINGENIHYGTPRNPCAPDRVPGGSSSGSAV 117

Query: 375  XXXXELVDFSLGTDTGGSTRVPASYCAIFGFRPSHAVVSTTGVIPMAQSFDTVGWFARDP 554
                ELVDFSLGTDTGGS RVPASYC IFGFRPSH  +S +GVIPM+QSFDTVGWFARDP
Sbjct: 118  AVGAELVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAISESGVIPMSQSFDTVGWFARDP 177

Query: 555  VILNKVGRVLLQLPYV-EPVQPRHVVIPNDCFQLLSILSDRLAQIIIESVEKLYGSQVVK 731
            +IL++VG V+LQLP V  P++P  ++I  DCFQL S   D +   +I++VEKLYG  V+K
Sbjct: 178  MILSRVGGVILQLPDVAPPIRPTCIIIAEDCFQLSSTPFDVVTGTVIQAVEKLYGGDVLK 237

Query: 732  HVNLGDYVSERVPSLEHFIDESNRHQEY-IPSLIALSSAMRCLQRYEFKTNHGKWVTTVK 908
            H  LGDYV   VPSL+HF+ + N  Q Y IPSL ALSSAMR LQRYEFK NHG+W++ VK
Sbjct: 238  HEILGDYVKTNVPSLKHFMSKENTDQIYSIPSLAALSSAMRLLQRYEFKNNHGEWISAVK 297

Query: 909  PNLGPGISERVLEAINSTDEHIDTCHLVKTELRTALNSLLEEFGILAIPTVPGPPPKLRT 1088
            P+LGPGISERV +A+ +T E+ID C+ +K EL  AL +LL +FG L IPTVPGPPPKL+T
Sbjct: 298  PDLGPGISERVSDALRTTGENIDICYSIKKELHDALAALLGDFGALMIPTVPGPPPKLQT 357

Query: 1089 QVSLLETFRARAFSLLSIAGVSGFCQVNIPLGMYDGFPISISLIAKHGADAFLLNIAETL 1268
              S LE FRARAFSLLSIAGVSGFCQV+IPLGMY+  P+SISL+A+HGAD FLL++ E+L
Sbjct: 358  NTSDLEIFRARAFSLLSIAGVSGFCQVSIPLGMYNNLPLSISLVARHGADRFLLHLVESL 417

Query: 1269 YINLKQQVEVAEKHR 1313
            Y ++K + +   +H+
Sbjct: 418  YDSIKDRKQHITEHK 432


Top