BLASTX nr result

ID: Coptis25_contig00017309 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017309
         (870 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37320.3| unnamed protein product [Vitis vinifera]              224   2e-56
ref|XP_002267492.1| PREDICTED: solute carrier family 35 member F...   224   2e-56
emb|CAN74056.1| hypothetical protein VITISV_001016 [Vitis vinifera]   224   2e-56
ref|XP_002321279.1| predicted protein [Populus trichocarpa] gi|2...   210   4e-52
ref|XP_002437460.1| hypothetical protein SORBIDRAFT_10g027500 [S...   209   9e-52

>emb|CBI37320.3| unnamed protein product [Vitis vinifera]
          Length = 390

 Score =  224 bits (571), Expect = 2e-56
 Identities = 118/230 (51%), Positives = 147/230 (63%), Gaps = 4/230 (1%)
 Frame = +1

Query: 1   SNTVLNXXXXXXXXXXXXXXXGERFTLLKLVSILLCFGGTVIVSLGDMESELSVIDTKPL 180
           SNT+L+               GE+FT +KL+S+LLC GGT+IVSLGD E+ LS I T PL
Sbjct: 147 SNTILSSASSLFTFLVALVFLGEKFTWVKLISVLLCMGGTIIVSLGDSETGLSAIATNPL 206

Query: 181 LGDILALASACLYASFITIIRKRIPDEDEKCGRVSMAQXXXXXXXXXXXXXXPVALVLNI 360
           LGDI AL SA LYA +IT+IRK IPD+D K G+VSMAQ              PVAL+LN 
Sbjct: 207 LGDIFALVSAALYAVYITLIRKNIPDDDGKSGQVSMAQFLGFLGLFNLLIFLPVALILNF 266

Query: 361 TNLEPFHIFSWKQFGLLIGKGLLDNVMSDYLSAKXXXXXXXXXXXXXXXIEVPMAAIVDS 540
           T LEPF+  +WKQ GL++GKGLLDNV+SDYL AK               I+VP+AA+VDS
Sbjct: 267 TKLEPFYTLTWKQLGLIVGKGLLDNVLSDYLWAKAILLTSTTVATAGLTIQVPLAAVVDS 326

Query: 541 VTGHAPNLMDYLGGAAVMVGFVGISMPF----HRGDVTSETESENVHTID 678
           +TG+APN MDY+G AAVM GF GI++P        +   E E EN+ + D
Sbjct: 327 LTGNAPNFMDYIGAAAVMAGFAGINIPIDDFCRSKEAGIELEKENISSTD 376


>ref|XP_002267492.1| PREDICTED: solute carrier family 35 member F5 [Vitis vinifera]
          Length = 435

 Score =  224 bits (571), Expect = 2e-56
 Identities = 118/230 (51%), Positives = 147/230 (63%), Gaps = 4/230 (1%)
 Frame = +1

Query: 1   SNTVLNXXXXXXXXXXXXXXXGERFTLLKLVSILLCFGGTVIVSLGDMESELSVIDTKPL 180
           SNT+L+               GE+FT +KL+S+LLC GGT+IVSLGD E+ LS I T PL
Sbjct: 192 SNTILSSASSLFTFLVALVFLGEKFTWVKLISVLLCMGGTIIVSLGDSETGLSAIATNPL 251

Query: 181 LGDILALASACLYASFITIIRKRIPDEDEKCGRVSMAQXXXXXXXXXXXXXXPVALVLNI 360
           LGDI AL SA LYA +IT+IRK IPD+D K G+VSMAQ              PVAL+LN 
Sbjct: 252 LGDIFALVSAALYAVYITLIRKNIPDDDGKSGQVSMAQFLGFLGLFNLLIFLPVALILNF 311

Query: 361 TNLEPFHIFSWKQFGLLIGKGLLDNVMSDYLSAKXXXXXXXXXXXXXXXIEVPMAAIVDS 540
           T LEPF+  +WKQ GL++GKGLLDNV+SDYL AK               I+VP+AA+VDS
Sbjct: 312 TKLEPFYTLTWKQLGLIVGKGLLDNVLSDYLWAKAILLTSTTVATAGLTIQVPLAAVVDS 371

Query: 541 VTGHAPNLMDYLGGAAVMVGFVGISMPF----HRGDVTSETESENVHTID 678
           +TG+APN MDY+G AAVM GF GI++P        +   E E EN+ + D
Sbjct: 372 LTGNAPNFMDYIGAAAVMAGFAGINIPIDDFCRSKEAGIELEKENISSTD 421


>emb|CAN74056.1| hypothetical protein VITISV_001016 [Vitis vinifera]
          Length = 413

 Score =  224 bits (571), Expect = 2e-56
 Identities = 118/230 (51%), Positives = 147/230 (63%), Gaps = 4/230 (1%)
 Frame = +1

Query: 1   SNTVLNXXXXXXXXXXXXXXXGERFTLLKLVSILLCFGGTVIVSLGDMESELSVIDTKPL 180
           SNT+L+               GE+FT +KL+S+LLC GGT+IVSLGD E+ LS I T PL
Sbjct: 170 SNTILSSASSLFTFLVALVFLGEKFTWVKLISVLLCMGGTIIVSLGDSETGLSAIATNPL 229

Query: 181 LGDILALASACLYASFITIIRKRIPDEDEKCGRVSMAQXXXXXXXXXXXXXXPVALVLNI 360
           LGDI AL SA LYA +IT+IRK IPD+D K G+VSMAQ              PVAL+LN 
Sbjct: 230 LGDIFALVSAALYAVYITLIRKNIPDDDGKSGQVSMAQFLGFLGLFNLLIFLPVALILNF 289

Query: 361 TNLEPFHIFSWKQFGLLIGKGLLDNVMSDYLSAKXXXXXXXXXXXXXXXIEVPMAAIVDS 540
           T LEPF+  +WKQ GL++GKGLLDNV+SDYL AK               I+VP+AA+VDS
Sbjct: 290 TKLEPFYTLTWKQLGLIVGKGLLDNVLSDYLWAKAILLTSTTVATAGLTIQVPLAAVVDS 349

Query: 541 VTGHAPNLMDYLGGAAVMVGFVGISMPF----HRGDVTSETESENVHTID 678
           +TG+APN MDY+G AAVM GF GI++P        +   E E EN+ + D
Sbjct: 350 LTGNAPNFMDYIGAAAVMAGFAGINIPIDDFCRSKEAGIELEKENISSTD 399


>ref|XP_002321279.1| predicted protein [Populus trichocarpa] gi|222862052|gb|EEE99594.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score =  210 bits (534), Expect = 4e-52
 Identities = 117/230 (50%), Positives = 146/230 (63%), Gaps = 4/230 (1%)
 Frame = +1

Query: 1   SNTVLNXXXXXXXXXXXXXXXGERFTLLKLVSILLCFGGTVIVSLGDMESELSVIDTKPL 180
           SNT+L+               GE+FT +KL+S+L C  GT+IVSLGD E+ LS + +KPL
Sbjct: 191 SNTILSSVSSLFTFVVSLVFLGEKFTWVKLLSVLFCMAGTIIVSLGDSETGLSAVSSKPL 250

Query: 181 LGDILALASACLYASFITIIRKRIPDEDEKCGRVSMAQXXXXXXXXXXXXXXPVALVLNI 360
           LGDILAL SA LYA +IT+IR ++PD D K G  SMAQ              PVALVL++
Sbjct: 251 LGDILALVSAGLYAVYITLIRLKLPDNDGKSGHASMAQFLGYLGLFNVIIFLPVALVLDL 310

Query: 361 TNLEPFHIFSWKQFGLLIGKGLLDNVMSDYLSAKXXXXXXXXXXXXXXXIEVPMAAIVDS 540
           TNLEP    +WKQFGL++GKGLLDNV+SDYL AK               I+VP+AAIVDS
Sbjct: 311 TNLEPLCKLTWKQFGLIVGKGLLDNVLSDYLWAKAVLLTTTTVATAGLSIQVPLAAIVDS 370

Query: 541 VTGHAPNLMDYLGGAAVMVGFVGISMP---FHRGDVTS-ETESENVHTID 678
             G+AP LMD LG  AV++GFVGI++P   F R    S E E+ENV + D
Sbjct: 371 FIGNAPRLMDGLGALAVLIGFVGINIPSDAFSRSKGASIELENENVRSTD 420


>ref|XP_002437460.1| hypothetical protein SORBIDRAFT_10g027500 [Sorghum bicolor]
           gi|241915683|gb|EER88827.1| hypothetical protein
           SORBIDRAFT_10g027500 [Sorghum bicolor]
          Length = 295

 Score =  209 bits (531), Expect = 9e-52
 Identities = 109/220 (49%), Positives = 139/220 (63%)
 Frame = +1

Query: 1   SNTVLNXXXXXXXXXXXXXXXGERFTLLKLVSILLCFGGTVIVSLGDMESELSVIDTKPL 180
           SNT+L+               GE FT LKL+S+LLC GGT+IVSL D  S  + I T PL
Sbjct: 52  SNTILSSTSSLFTFLVALVFLGETFTWLKLISVLLCMGGTIIVSLADSSSSANAIATNPL 111

Query: 181 LGDILALASACLYASFITIIRKRIPDEDEKCGRVSMAQXXXXXXXXXXXXXXPVALVLNI 360
           LGD L++ SA LYA +IT+IRK++PDE E  G+VSMAQ              PVALVLN 
Sbjct: 112 LGDFLSIVSAGLYAVYITLIRKKLPDEKEGQGQVSMAQFLGFLGLFNMLFFLPVALVLNF 171

Query: 361 TNLEPFHIFSWKQFGLLIGKGLLDNVMSDYLSAKXXXXXXXXXXXXXXXIEVPMAAIVDS 540
             LEPFH  +W+Q GL++GKGL+DNV+SDYL AK               I+VP+AAIVD+
Sbjct: 172 AKLEPFHKLTWEQVGLVVGKGLIDNVLSDYLWAKAILLTTTTVATAGLTIQVPIAAIVDT 231

Query: 541 VTGHAPNLMDYLGGAAVMVGFVGISMPFHRGDVTSETESE 660
           +TGHAP+L+DY+G AAV+VGF GI++P        + E E
Sbjct: 232 LTGHAPHLLDYIGAAAVLVGFAGINIPVGESPQVVQQEQE 271


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