BLASTX nr result

ID: Coptis25_contig00017308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017308
         (941 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39667.3| unnamed protein product [Vitis vinifera]              370   e-100
ref|XP_002279795.1| PREDICTED: isopenicillin N epimerase-like is...   370   e-100
ref|XP_002512578.1| cysteine desulfurylase, putative [Ricinus co...   358   8e-97
ref|XP_003626145.1| Cysteine desulfurase [Medicago truncatula] g...   356   5e-96
gb|AFK38273.1| unknown [Medicago truncatula]                          355   1e-95

>emb|CBI39667.3| unnamed protein product [Vitis vinifera]
          Length = 511

 Score =  370 bits (951), Expect = e-100
 Identities = 178/265 (67%), Positives = 214/265 (80%), Gaps = 6/265 (2%)
 Frame = +1

Query: 163 SMEKHSEQQLVQE-----EFSHHDQTIARINNGSFGSCPASIISAQHQWQLRFLQQPDDF 327
           ++ K S+  L+ E     EFSHHD +IARINNGSFGSCPAS+ +AQH WQL FL+QPD F
Sbjct: 82  NISKKSKPMLISESDLRFEFSHHDPSIARINNGSFGSCPASVTAAQHHWQLLFLRQPDHF 141

Query: 328 YFNHLQPGLLQSRTAIKNLINAAFLEEVAIIDNVTTAAAIVLQHISWGFVQGKYHRGDTV 507
           YFN LQP +L+SRT IK+L+NA  ++E++++DN TTAAAIVLQ I+W F +G++ RGD V
Sbjct: 142 YFNRLQPAILRSRTLIKDLVNADHVDEISLVDNATTAAAIVLQQIAWAFTEGRFQRGDAV 201

Query: 508 VMLRYTYGAVKKSIHAYISRMGGNVIEAAVPFPVQSNEQIVMAFRQALGKAKENGNKVIL 687
           VML Y YGAVKKSIHAY+ R GG VIE  +PFPV SNE+IV  FR+AL + K N  +V L
Sbjct: 202 VMLHYAYGAVKKSIHAYVCRAGGQVIEVPLPFPVNSNEEIVDEFRRALMRGKANSGRVRL 261

Query: 688 AVIDHISSMPSVLLPVKELVRICREEMVEQVFVDGAHGIGSVHVDMQDIGADFYTSNLHK 867
           AVIDHI+SMPSVL+PVKELV+ICREE V+QVFVD AHGIG   VDM++IGADFYTSNLHK
Sbjct: 262 AVIDHITSMPSVLIPVKELVKICREEGVDQVFVDAAHGIGCTDVDMKEIGADFYTSNLHK 321

Query: 868 WFFCPPCVAFLYCKKSP-TLLELHH 939
           WFFCPP VAFLYC+K+P T  ELHH
Sbjct: 322 WFFCPPSVAFLYCRKTPETSPELHH 346


>ref|XP_002279795.1| PREDICTED: isopenicillin N epimerase-like isoform 1 [Vitis
           vinifera] gi|359487585|ref|XP_003633615.1| PREDICTED:
           isopenicillin N epimerase-like isoform 2 [Vitis
           vinifera]
          Length = 447

 Score =  370 bits (951), Expect = e-100
 Identities = 178/265 (67%), Positives = 214/265 (80%), Gaps = 6/265 (2%)
 Frame = +1

Query: 163 SMEKHSEQQLVQE-----EFSHHDQTIARINNGSFGSCPASIISAQHQWQLRFLQQPDDF 327
           ++ K S+  L+ E     EFSHHD +IARINNGSFGSCPAS+ +AQH WQL FL+QPD F
Sbjct: 18  NISKKSKPMLISESDLRFEFSHHDPSIARINNGSFGSCPASVTAAQHHWQLLFLRQPDHF 77

Query: 328 YFNHLQPGLLQSRTAIKNLINAAFLEEVAIIDNVTTAAAIVLQHISWGFVQGKYHRGDTV 507
           YFN LQP +L+SRT IK+L+NA  ++E++++DN TTAAAIVLQ I+W F +G++ RGD V
Sbjct: 78  YFNRLQPAILRSRTLIKDLVNADHVDEISLVDNATTAAAIVLQQIAWAFTEGRFQRGDAV 137

Query: 508 VMLRYTYGAVKKSIHAYISRMGGNVIEAAVPFPVQSNEQIVMAFRQALGKAKENGNKVIL 687
           VML Y YGAVKKSIHAY+ R GG VIE  +PFPV SNE+IV  FR+AL + K N  +V L
Sbjct: 138 VMLHYAYGAVKKSIHAYVCRAGGQVIEVPLPFPVNSNEEIVDEFRRALMRGKANSGRVRL 197

Query: 688 AVIDHISSMPSVLLPVKELVRICREEMVEQVFVDGAHGIGSVHVDMQDIGADFYTSNLHK 867
           AVIDHI+SMPSVL+PVKELV+ICREE V+QVFVD AHGIG   VDM++IGADFYTSNLHK
Sbjct: 198 AVIDHITSMPSVLIPVKELVKICREEGVDQVFVDAAHGIGCTDVDMKEIGADFYTSNLHK 257

Query: 868 WFFCPPCVAFLYCKKSP-TLLELHH 939
           WFFCPP VAFLYC+K+P T  ELHH
Sbjct: 258 WFFCPPSVAFLYCRKTPETSPELHH 282


>ref|XP_002512578.1| cysteine desulfurylase, putative [Ricinus communis]
           gi|223548539|gb|EEF50030.1| cysteine desulfurylase,
           putative [Ricinus communis]
          Length = 456

 Score =  358 bits (920), Expect = 8e-97
 Identities = 165/240 (68%), Positives = 205/240 (85%)
 Frame = +1

Query: 193 VQEEFSHHDQTIARINNGSFGSCPASIISAQHQWQLRFLQQPDDFYFNHLQPGLLQSRTA 372
           +Q EF HHD ++ARINNGSFGSCP S+ISAQH WQL+FL+QPD+FYFN L+PG+L SR+ 
Sbjct: 36  IQSEFCHHDASVARINNGSFGSCPNSVISAQHDWQLQFLEQPDNFYFNKLKPGILHSRSI 95

Query: 373 IKNLINAAFLEEVAIIDNVTTAAAIVLQHISWGFVQGKYHRGDTVVMLRYTYGAVKKSIH 552
           IK LINA  ++EV+++DN TTAAAIVLQ I+  F +G++++GD  VML Y YGAVKKS+ 
Sbjct: 96  IKTLINANHVDEVSLVDNATTAAAIVLQRIARSFSEGRFNKGDVAVMLHYAYGAVKKSVE 155

Query: 553 AYISRMGGNVIEAAVPFPVQSNEQIVMAFRQALGKAKENGNKVILAVIDHISSMPSVLLP 732
           AY++R GG+VIE  +PFPV+S E+IV  FR+ALG+ KE+G KV LAVIDH++SMPSV++P
Sbjct: 156 AYVTRAGGHVIEVQLPFPVKSEEEIVTEFRKALGRGKEDGKKVRLAVIDHVTSMPSVVIP 215

Query: 733 VKELVRICREEMVEQVFVDGAHGIGSVHVDMQDIGADFYTSNLHKWFFCPPCVAFLYCKK 912
           VKELV+ICREE V+QVFVD AHGIG V VDM++IGADFYTSNLHKWFFCPP VAFLYC+K
Sbjct: 216 VKELVKICREENVDQVFVDAAHGIGCVDVDMKEIGADFYTSNLHKWFFCPPSVAFLYCRK 275


>ref|XP_003626145.1| Cysteine desulfurase [Medicago truncatula]
           gi|355501160|gb|AES82363.1| Cysteine desulfurase
           [Medicago truncatula]
          Length = 455

 Score =  356 bits (913), Expect = 5e-96
 Identities = 165/252 (65%), Positives = 205/252 (81%), Gaps = 3/252 (1%)
 Frame = +1

Query: 193 VQEEFSHHDQTIARINNGSFGSCPASIISAQHQWQLRFLQQPDDFYFNHLQPGLLQSRTA 372
           +Q EFSHHD  ++RINNGSFGSCP+SI+SAQ QWQL++L+QPD FYFNHL+P +  SR+ 
Sbjct: 39  IQSEFSHHDSAVSRINNGSFGSCPSSILSAQQQWQLKYLRQPDHFYFNHLKPAINNSRSI 98

Query: 373 IKNLINAAFLEEVAIIDNVTTAAAIVLQHISWGFVQGKYHRGDTVVMLRYTYGAVKKSIH 552
           I+NL+NA  + E++I+DN TTAAAIVLQH +W F +GK+++GD VVML Y YGAVKKS+ 
Sbjct: 99  IQNLVNAKDINEISIVDNATTAAAIVLQHTAWCFREGKFNKGDVVVMLHYAYGAVKKSME 158

Query: 553 AYISRMGGNVIEAAVPFPVQSNEQIVMAFRQALGKAKENGNKVILAVIDHISSMPSVLLP 732
           AY++R GG VIE  +PFPV SN++IV  FR+AL K K +G K+ LAVIDH++SMP V++P
Sbjct: 159 AYVTRAGGKVIEVPLPFPVSSNDEIVTEFRKALEKGKVDGKKIRLAVIDHVTSMPCVVIP 218

Query: 733 VKELVRICREEMVEQVFVDGAHGIGSVHVDMQDIGADFYTSNLHKWFFCPPCVAFLYCKK 912
           VKEL++ICREE VEQVFVD AH IG   VDMQDIGADFYTSNLHKWFFCPP +AFLY KK
Sbjct: 219 VKELIQICREEGVEQVFVDAAHSIGCTDVDMQDIGADFYTSNLHKWFFCPPSIAFLYTKK 278

Query: 913 SPTL---LELHH 939
           +P      +LHH
Sbjct: 279 NPKTGGGGDLHH 290


>gb|AFK38273.1| unknown [Medicago truncatula]
          Length = 455

 Score =  355 bits (910), Expect = 1e-95
 Identities = 164/252 (65%), Positives = 205/252 (81%), Gaps = 3/252 (1%)
 Frame = +1

Query: 193 VQEEFSHHDQTIARINNGSFGSCPASIISAQHQWQLRFLQQPDDFYFNHLQPGLLQSRTA 372
           +Q EFSHHD  ++RINNGSFGSCP+SI+SAQ QWQL++L+QPD FYFNHL+P +  SR+ 
Sbjct: 39  IQSEFSHHDSAVSRINNGSFGSCPSSILSAQQQWQLKYLRQPDHFYFNHLKPAINNSRSI 98

Query: 373 IKNLINAAFLEEVAIIDNVTTAAAIVLQHISWGFVQGKYHRGDTVVMLRYTYGAVKKSIH 552
           I+NL+NA  + E++I+DN TTAAAIVLQH +W F +GK+++GD VVML Y YGAVKKS+ 
Sbjct: 99  IQNLVNAKDINEISIVDNATTAAAIVLQHTAWCFREGKFNKGDVVVMLHYAYGAVKKSME 158

Query: 553 AYISRMGGNVIEAAVPFPVQSNEQIVMAFRQALGKAKENGNKVILAVIDHISSMPSVLLP 732
           AY++R GG VIE  +PFPV SN++IV  FR+AL K K +G K+ LAVIDH++SMP V++P
Sbjct: 159 AYVTRAGGKVIEVPLPFPVSSNDEIVTEFRKALEKGKVDGKKIRLAVIDHVTSMPCVVIP 218

Query: 733 VKELVRICREEMVEQVFVDGAHGIGSVHVDMQDIGADFYTSNLHKWFFCPPCVAFLYCKK 912
           VKEL++ICREE VEQVFVD AH IG   VDMQDIGADFYT+NLHKWFFCPP +AFLY KK
Sbjct: 219 VKELIQICREEGVEQVFVDAAHSIGCTDVDMQDIGADFYTTNLHKWFFCPPSIAFLYTKK 278

Query: 913 SPTL---LELHH 939
           +P      +LHH
Sbjct: 279 NPKTGGGGDLHH 290


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