BLASTX nr result

ID: Coptis25_contig00017295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017295
         (1075 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627002.1| GATA transcription factor [Medicago truncatu...   138   3e-30
emb|CAH67389.1| H0115B09.1 [Oryza sativa Indica Group]                133   9e-29
gb|EEC77722.1| hypothetical protein OsI_16813 [Oryza sativa Indi...   133   9e-29
ref|XP_003530114.1| PREDICTED: GATA transcription factor 9-like ...   132   1e-28
ref|XP_003531654.1| PREDICTED: LOW QUALITY PROTEIN: GATA transcr...   130   6e-28

>ref|XP_003627002.1| GATA transcription factor [Medicago truncatula]
           gi|355521024|gb|AET01478.1| GATA transcription factor
           [Medicago truncatula]
          Length = 342

 Score =  138 bits (347), Expect = 3e-30
 Identities = 86/216 (39%), Positives = 115/216 (53%), Gaps = 22/216 (10%)
 Frame = -2

Query: 636 LCIPNDPIEEIGLWFVPNFSDDSISLESESFSTTPSCENPSLVSFSPTASCESP-SFVSF 460
           LC+P D + E  L ++ NF +DS S E E        +   L+S +     ++P S  S 
Sbjct: 105 LCVPYDDMAE--LEWLSNFVEDSYSAEEE-------LKTLQLLSGAGAVKPQTPESSSST 155

Query: 459 PTTPEQDIESNAKKRSFGEDLHEVLVQENHVLMKKQRSKRSPKRVGPFKVKVL-----PP 295
            T P    +  A+  SF        ++    L  K RSKRS    G +  ++L     PP
Sbjct: 156 DTLPSFSTDETARNASF--------LRPETPLPGKARSKRSRAAPGDWSTRLLHLPDAPP 207

Query: 294 KR----------------RSCTHCGTEETPQWRVGPSGPKTLCNACGVRYKSGRLVPEYR 163
           K                 R C HCGT++TPQWR GP GPKTLCNACGVR+KSGRLVPEYR
Sbjct: 208 KNYPIVKKREDPNVECSGRKCLHCGTDKTPQWRTGPMGPKTLCNACGVRFKSGRLVPEYR 267

Query: 162 PAASPTFNSEMHSNSHKQIVKMRLTRDV*EILYHVH 55
           PAASPTF S  HSNSH++++++R  +++     H H
Sbjct: 268 PAASPTFVSAKHSNSHRKVLELRRQKEMQRSSQHHH 303


>emb|CAH67389.1| H0115B09.1 [Oryza sativa Indica Group]
          Length = 376

 Score =  133 bits (334), Expect = 9e-29
 Identities = 73/171 (42%), Positives = 96/171 (56%), Gaps = 1/171 (0%)
 Frame = -2

Query: 588 PNFSDDSISLESESFSTTPSCENP-SLVSFSPTASCESPSFVSFPTTPEQDIESNAKKRS 412
           P FSD   S  S S +TT SC +  S  SFSP    E          P+  +    KK  
Sbjct: 197 PPFSD---STSSSSTTTTSSCSSSASFSSFSPLLKFEWHPLGGTSDLPDDHLLPPGKKSK 253

Query: 411 FGEDLHEVLVQENHVLMKKQRSKRSPKRVGPFKVKVLPPKRRSCTHCGTEETPQWRVGPS 232
            G++       +N    + ++ K+ P            P  R C+HCG ++TPQWR GP 
Sbjct: 254 HGKN------GKNKPKKRGRKPKQLPPHPSGAAASAPAPGDRRCSHCGVQKTPQWRAGPE 307

Query: 231 GPKTLCNACGVRYKSGRLVPEYRPAASPTFNSEMHSNSHKQIVKMRLTRDV 79
           G KTLCNACGVRYKSGRL+PEYRPA SPTF S +HSNSH+++++MR  ++V
Sbjct: 308 GAKTLCNACGVRYKSGRLLPEYRPACSPTFVSAIHSNSHRKVLEMRRKKEV 358


>gb|EEC77722.1| hypothetical protein OsI_16813 [Oryza sativa Indica Group]
           gi|222629288|gb|EEE61420.1| hypothetical protein
           OsJ_15621 [Oryza sativa Japonica Group]
          Length = 390

 Score =  133 bits (334), Expect = 9e-29
 Identities = 73/171 (42%), Positives = 96/171 (56%), Gaps = 1/171 (0%)
 Frame = -2

Query: 588 PNFSDDSISLESESFSTTPSCENP-SLVSFSPTASCESPSFVSFPTTPEQDIESNAKKRS 412
           P FSD   S  S S +TT SC +  S  SFSP    E          P+  +    KK  
Sbjct: 211 PPFSD---STSSSSTTTTSSCSSSASFSSFSPLLKFEWHPLGGTSDLPDDHLLPPGKKSK 267

Query: 411 FGEDLHEVLVQENHVLMKKQRSKRSPKRVGPFKVKVLPPKRRSCTHCGTEETPQWRVGPS 232
            G++       +N    + ++ K+ P            P  R C+HCG ++TPQWR GP 
Sbjct: 268 HGKN------GKNKPKKRGRKPKQLPPHPSGAAASAPAPGDRRCSHCGVQKTPQWRAGPE 321

Query: 231 GPKTLCNACGVRYKSGRLVPEYRPAASPTFNSEMHSNSHKQIVKMRLTRDV 79
           G KTLCNACGVRYKSGRL+PEYRPA SPTF S +HSNSH+++++MR  ++V
Sbjct: 322 GAKTLCNACGVRYKSGRLLPEYRPACSPTFVSAIHSNSHRKVLEMRRKKEV 372


>ref|XP_003530114.1| PREDICTED: GATA transcription factor 9-like [Glycine max]
          Length = 347

 Score =  132 bits (333), Expect = 1e-28
 Identities = 81/214 (37%), Positives = 110/214 (51%), Gaps = 28/214 (13%)
 Frame = -2

Query: 636 LCIPNDPIEEIGLWFVPNFSDDSISLESESFSTTPSCENPSLVSFSPTASCESPSFVSFP 457
           LC+P D + E  L ++ NF +DS S E E             +     A+  S +  + P
Sbjct: 105 LCVPYDEMAE--LEWLSNFVEDSFSAEEEL----------KTLQLLSGAAAASTAIGAKP 152

Query: 456 TTPEQDIESNAKKRSFGEDL--HEVLVQENHVLMKKQRSKRSPKRVGPFKVKVL------ 301
            TPE    ++       +D   +   +     L  K RSKRS    G +  ++L      
Sbjct: 153 QTPESSSSTDTLPPFASDDTLRNAPFLHSETPLPGKARSKRSRAAPGDWSTRLLHLVATE 212

Query: 300 ----------PPKRRS----------CTHCGTEETPQWRVGPSGPKTLCNACGVRYKSGR 181
                     P K+R           C HCGTE+TPQWR GP GPKTLCNACGVR+KSGR
Sbjct: 213 QEKLPQLKAEPAKKREGTNAECSGRKCLHCGTEKTPQWRTGPMGPKTLCNACGVRFKSGR 272

Query: 180 LVPEYRPAASPTFNSEMHSNSHKQIVKMRLTRDV 79
           LVPEYRPAASPTF S  HSNSH++++++R  +++
Sbjct: 273 LVPEYRPAASPTFMSTKHSNSHRKVLELRRQKEL 306


>ref|XP_003531654.1| PREDICTED: LOW QUALITY PROTEIN: GATA transcription factor 9-like
           [Glycine max]
          Length = 347

 Score =  130 bits (327), Expect = 6e-28
 Identities = 87/227 (38%), Positives = 114/227 (50%), Gaps = 22/227 (9%)
 Frame = -2

Query: 675 PRFINSSLMDFEPLCIPNDPIEEIGLWFVPNFSDDSISLESESFSTTPSCENPSLVSFSP 496
           PR  +S       LC+P D + E  L ++ NF +DS S E E   T          S + 
Sbjct: 92  PRCYHSDPQFSGELCVPYDEMAE--LEWLSNFVEDSFSAEEE-LKTLQLLSGGGAASTAI 148

Query: 495 TASCESP-SFVSFPTTPEQDIESNAKKRSFGEDLHEVLVQENHVLMKKQRSKRSPKRVGP 319
            A  ++P S  S  T P        +   F   LH    +       K RSKRS    G 
Sbjct: 149 GAKPQTPESSSSTDTLPPFASRRTLRNAPF---LHSETPRPG-----KARSKRSRAAPGD 200

Query: 318 FKVKVL---------PPKR------------RSCTHCGTEETPQWRVGPSGPKTLCNACG 202
           +  ++L         PP+             R C HCG E+TPQWR GP GPKTLCNACG
Sbjct: 201 WSTRLLHLVAPEKEKPPQAKKREGTNVECSGRKCLHCGAEKTPQWRTGPMGPKTLCNACG 260

Query: 201 VRYKSGRLVPEYRPAASPTFNSEMHSNSHKQIVKMRLTRDV*EILYH 61
           VR+KSGRLVPEYRPAASPTF S  HSNSH++++++R  +++    +H
Sbjct: 261 VRFKSGRLVPEYRPAASPTFMSTKHSNSHRKVLELRRQKEMQRQQHH 307


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