BLASTX nr result

ID: Coptis25_contig00017292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017292
         (2011 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269363.1| PREDICTED: uncharacterized protein LOC100255...   506   e-140
ref|XP_002513009.1| DNA binding protein, putative [Ricinus commu...   442   e-121
ref|XP_002305468.1| predicted protein [Populus trichocarpa] gi|2...   425   e-116
ref|XP_004170187.1| PREDICTED: uncharacterized protein LOC101227...   417   e-114
ref|XP_004148549.1| PREDICTED: uncharacterized protein LOC101216...   417   e-114

>ref|XP_002269363.1| PREDICTED: uncharacterized protein LOC100255631 [Vitis vinifera]
          Length = 589

 Score =  506 bits (1302), Expect = e-140
 Identities = 305/564 (54%), Positives = 360/564 (63%), Gaps = 23/564 (4%)
 Frame = +2

Query: 335  MEDREKNGNDAMQRLQSSFGTTQQS------SINRFEMPQLNTSSLQGHGNMRFFTPNFS 496
            M D E+   D +QRLQSSFGT+  S      S+N+ ++PQLN SS      MR F+PNFS
Sbjct: 1    MGDTEEANIDMIQRLQSSFGTSSSSIQKQPMSMNQLDIPQLNASSQIRAPMMRHFSPNFS 60

Query: 497  PESSNSKRXXXXXXXXXXXXXXXFSQIPVSRISTQQPSLQNLSPGPTHSRSLSQPAIFSF 676
             +SS  +                +SQIPV R + QQ   QN SPGP+HSRSLSQP+ FS 
Sbjct: 61   GDSSK-RHGFPPSHPHQIPPISPYSQIPVPRPANQQLVSQNFSPGPSHSRSLSQPSFFSL 119

Query: 677  DXXXXXXXXXXXXXXNYRECTPSPVSDSV--DISKEDRDGGMHA-----SQPFSSGRAIS 835
            D               YR+ + + +SD+V  DIS EDRD   H+       PFS G   S
Sbjct: 120  DSLPPLSPSP------YRDSSSTSISDAVSADISMEDRDASSHSVLPPSPSPFSRGN--S 171

Query: 836  VRSGESSLPPRKGHRRSISDIPFGYATVIQSSPPLIPLSGQGNLNQSAFVRENS-GNVNP 1012
            +R GE+ LPPRK HRRS SDIPFG+++++QSSPPLIPL G G L +S   R+N+     P
Sbjct: 172  MRVGEN-LPPRKAHRRSSSDIPFGFSSIMQSSPPLIPLRGSGALERSMSGRDNNMAAAKP 230

Query: 1013 VQLVKREGEWDKNGGKSAEGMDERKSEGDAIDDLFSAYLNLDNVELLNSPETKVKNFNDI 1192
            VQLVKRE  W++ G  +AEGM ERKSEG+ +DDL SAY+NLDN++ LNSP T+ KN  + 
Sbjct: 231  VQLVKRESSWERGGDSNAEGMGERKSEGEVVDDLLSAYMNLDNIDALNSPGTEEKNGTEN 290

Query: 1193 RDDLDSRASGTKMSGGDSSDNETGSSANESGCSITQTNLCSSKNK-EAFKRSAGEDIAPA 1369
            R+DLDSRASGTK +GGDSSDNE  SS NESG S+ +    SS  K E  KRSAG DIAP 
Sbjct: 291  REDLDSRASGTKTNGGDSSDNEAESSVNESGNSMQKLGTSSSAEKREGVKRSAGGDIAPT 350

Query: 1370 NRHRRSVSMDSFMGNLPNFGDESLKLSAS-------VANQTSVDGISSNFSLDFANGEFS 1528
             RH RSVSMDSFMG + NFGDES KL  S       ++   S+DG S+ FSL+F NGEFS
Sbjct: 351  TRHYRSVSMDSFMGKM-NFGDESPKLLPSPGTRPGQLSPSNSMDGNSATFSLEFGNGEFS 409

Query: 1529 GPELKKIMANEKLAEIASADPKRAKRILANRQSAARSKERKMRYISELEHKVXXXXXXXX 1708
            G ELKKIMANEKLAEIA  DPKRAKRILANRQSAARSKERKMRYISELEHKV        
Sbjct: 410  GAELKKIMANEKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEAT 469

Query: 1709 XXXXXXXXXXRDSTGLTSENNELKFXXXXXXXXXXXXXXLNEALTAEVKRLKLVTGESNG 1888
                      RDS GLTS+NNELKF              LNEALTAEV+RLKL T E  G
Sbjct: 470  TLSAQLTLLQRDSAGLTSQNNELKFRLQAMEQQAQLRDALNEALTAEVQRLKLATAELGG 529

Query: 1889 EVLRSNRLA-QLTMNAQMFQAQHK 1957
            E   S  L  QL++N QMF   H+
Sbjct: 530  ESQASKCLVPQLSVNPQMFHLHHQ 553


>ref|XP_002513009.1| DNA binding protein, putative [Ricinus communis]
            gi|223548020|gb|EEF49512.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 574

 Score =  442 bits (1137), Expect = e-121
 Identities = 284/561 (50%), Positives = 341/561 (60%), Gaps = 22/561 (3%)
 Frame = +2

Query: 335  MEDREKNGNDAMQRLQSSFGTTQQSS-------INRFEMPQLNTSSLQGHGNMRFFTPNF 493
            M D E+  ++ MQRL SSFGTTQ SS       + + E+P LN +  +   +   F  NF
Sbjct: 1    MGDTEEANSEMMQRLHSSFGTTQSSSKQQPFSSMTQLEIPHLNQTQNRAR-HFAHFAQNF 59

Query: 494  SPESSNSKRXXXXXXXXXXXXXXXFSQIPVSRISTQQPSLQNLSPGPTHSRSLSQPA-IF 670
            S +SS  +                +SQIPVSR   QQ   QN SPGPTHSRSLSQP+  F
Sbjct: 60   STDSSK-RIGIPPSHPNQIPPISPYSQIPVSRPGNQQMGSQNFSPGPTHSRSLSQPSSFF 118

Query: 671  SFDXXXXXXXXXXXXXXNYRECTPSPVSD--SVDISKEDRDGGMHA---SQPFSSGRAIS 835
            S D               +R+ + + V+D  S D+S E+RD   H+     PF+ G A  
Sbjct: 119  SLDSLPPLSPAP------FRDSSSTSVADPVSTDVSMEERDANSHSLLPPSPFNRGNASR 172

Query: 836  VRSGESSLPPRKGHRRSISDIPFGYATVIQSSPPLIPLSGQGNLNQSAFVRENSGNVNPV 1015
            V     SLPPRK HRRS SDIPFG + V+QSSPPLIPL   G L +S   +ENS    P 
Sbjct: 173  VAE---SLPPRKAHRRSNSDIPFGLSYVMQSSPPLIPLRPSGGLERSVSGKENSSVAKPT 229

Query: 1016 QLVKREGEWDKNGGKSAEGMDERKSEGDAIDDLFSAYLNLDNVELLNSPETKVKNFNDIR 1195
            QLVK+E  W++     AEGM ERKSEG+ +DDLFSAY+NLD ++ LNS  T  KN N+ R
Sbjct: 230  QLVKKE--WERGNDSIAEGMGERKSEGEVVDDLFSAYMNLDTIDALNSSGTDDKNGNENR 287

Query: 1196 DDLDSRASGTKMSGGDSSDNETGSSANESGCSITQTNLCSSKNK-EAFKRSAGEDIAPAN 1372
            +DLDSRASGTK +GGDSSDNE  SS NESG S+ +  + SS  K E  KRSAG DIAP  
Sbjct: 288  EDLDSRASGTKTNGGDSSDNEAESSVNESGSSLLRAGVNSSTEKREGIKRSAGGDIAPTT 347

Query: 1373 RHRRSVSMDSFMGNLPNFGDESLKLSAS-------VANQTSVDGISSNFSLDFANGEFSG 1531
            RH RSVSMDSFMG L NFGDES KL  S       ++   S+DG  + FSLDF NGEFSG
Sbjct: 348  RHYRSVSMDSFMGKL-NFGDESPKLPPSPGSRPGQLSPSNSIDG--NAFSLDFGNGEFSG 404

Query: 1532 PELKKIMANEKLAEIASADPKRAKRILANRQSAARSKERKMRYISELEHKVXXXXXXXXX 1711
             ELKKIMANEKLAEIA  DPKRAKRILANRQSAARSKERKMRYISELEHKV         
Sbjct: 405  AELKKIMANEKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKV--------- 455

Query: 1712 XXXXXXXXXRDSTGLTSENNELKFXXXXXXXXXXXXXXLNEALTAEVKRLKLVTGESNGE 1891
                      ++T L+++   L+               LNEALTAEV+RLKL T E +G+
Sbjct: 456  -----QTLQTEATTLSAQLTLLQ---------SPYLTTLNEALTAEVRRLKLATAELSGD 501

Query: 1892 VLRSNRLA-QLTMNAQMFQAQ 1951
               +  +  QL++N QMFQ Q
Sbjct: 502  SEPTKGMVQQLSINPQMFQLQ 522


>ref|XP_002305468.1| predicted protein [Populus trichocarpa] gi|222848432|gb|EEE85979.1|
            predicted protein [Populus trichocarpa]
          Length = 507

 Score =  425 bits (1093), Expect = e-116
 Identities = 256/460 (55%), Positives = 296/460 (64%), Gaps = 14/460 (3%)
 Frame = +2

Query: 614  QNLSPGPTHSRSLSQPA-IFSFDXXXXXXXXXXXXXXNYRECTPSPVSD--SVDISKEDR 784
            Q+ S GPTHSRSLSQP+  FS D               +R+ +   VSD  S D+  E++
Sbjct: 4    QSFSLGPTHSRSLSQPSSFFSLDSLPPLSPAP------FRDSSSPSVSDPISTDVFMEEK 57

Query: 785  DGGMHA---SQPFSSGRAISVRSGESSLPPRKGHRRSISDIPFGYATVIQSSPPLIPLSG 955
            DGG H+     PF+ G A  V     SLPPRK HRRS SDIPFG A V+Q SPPLIP  G
Sbjct: 58   DGGSHSLLPPSPFNRGNAPRV---VESLPPRKAHRRSNSDIPFGLANVLQCSPPLIPSRG 114

Query: 956  QGNLNQSAFVRENSGNVNPVQLVKREGEWDKNGGKSAEGMDERKSEGDAIDDLFSAYLNL 1135
               L +S   REN G   P Q VK+E  W++ G  +AEGM ERKSEG+ +DDLFSAY+NL
Sbjct: 115  SSGLERSMSGRENLGMAKPAQSVKKE--WERGGDSNAEGMGERKSEGEVVDDLFSAYMNL 172

Query: 1136 DNVELLNSPETKVKNFNDIRDDLDSRASGTKMSGGDSSDNETGSSANESGCSITQTNLCS 1315
            DN+++LNS  T  KN N+ R+DLDSRASGTK +GGDSSDNE  SS NESG ++ +  L S
Sbjct: 173  DNIDVLNSSGTDDKNGNENREDLDSRASGTKTNGGDSSDNEAESSVNESGGNLPRAGLSS 232

Query: 1316 SKNK-EAFKRSAGEDIAPANRHRRSVSMDSFMGNLPNFGDESLKLSASVANQ----TSVD 1480
            S  K E  KRSAG DIAP  RH RSVSMDSFMG L NFG+ES KL  S   +    +  D
Sbjct: 233  STEKREGIKRSAGGDIAPTTRHYRSVSMDSFMGKL-NFGNESPKLPPSPGTRPGQLSPTD 291

Query: 1481 GISSN-FSLDFANGEFSGPELKKIMANEKLAEIASADPKRAKRILANRQSAARSKERKMR 1657
             I  N FSLDF NGEFSG ELKKIMANEKLAEIA ADPKRAKRILANRQSAARSKERKMR
Sbjct: 292  SIDGNAFSLDFGNGEFSGAELKKIMANEKLAEIALADPKRAKRILANRQSAARSKERKMR 351

Query: 1658 YISELEHKVXXXXXXXXXXXXXXXXXXRDSTGLTSENNELKFXXXXXXXXXXXXXXLNEA 1837
            YISELEHKV                  RDS GLT++NNELKF              LNEA
Sbjct: 352  YISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNNELKFRIQAMEQQAQLRDALNEA 411

Query: 1838 LTAEVKRLKLVTGESNGEVLRSNRLA--QLTMNAQMFQAQ 1951
            LTAEV+RLK+ T E  G+   S  +   QL++N QM+  Q
Sbjct: 412  LTAEVRRLKIATAEQGGDSDPSKSMVQQQLSINPQMYLQQ 451


>ref|XP_004170187.1| PREDICTED: uncharacterized protein LOC101227308 [Cucumis sativus]
          Length = 566

 Score =  417 bits (1072), Expect = e-114
 Identities = 262/552 (47%), Positives = 323/552 (58%), Gaps = 14/552 (2%)
 Frame = +2

Query: 338  EDREKNGNDAMQRLQSSFGTTQQSSINR-FEMPQLNTSSLQGHG-NMRFFTPNFSPESSN 511
            +  + N  +    LQ S+G +  S+ N  F M QL  S +       + F  NF  ++S 
Sbjct: 3    DTEDVNTENMRNHLQCSYGVSSSSAGNLPFSMDQLKISQMNSSQIRPQHFHSNFLGDNSR 62

Query: 512  SKRXXXXXXXXXXXXXXXFSQIPVSRISTQQPSLQNLSPGPTHSRSLSQPAIFSFDXXXX 691
                              +SQIP+SR   QQ    N +P PTHSRSLSQP+ FS D    
Sbjct: 63   RIGIPPSPNSPQIPPISPYSQIPISRPMNQQ----NYNPVPTHSRSLSQPSFFSLDSLPP 118

Query: 692  XXXXXXXXXXNYRECTPSPVSDSV--DISKEDRDGGMHASQPFSSGRAISVRSGESSLPP 865
                       +RE   +  SD V  D S EDRD   H+  P S    ++      SLPP
Sbjct: 119  LSPSP------FRESPTTSNSDQVSADTSMEDRDNSSHSLLPPSPYMRVNSSKMGDSLPP 172

Query: 866  RKGHRRSISDIPFGYATVIQSSPPLIPLSGQGNLNQSAFVRENSGNVNPV-QLVKREGEW 1042
            RK HRRS SDIPFG +++IQ SP L+P +  G L +S   +EN+G + P  Q VKRE   
Sbjct: 173  RKAHRRSNSDIPFGLSSMIQPSP-LLPFNSSGGLERSTSSKENAGLLKPSSQFVKREHSL 231

Query: 1043 DKNGGKSAEGMDERKSEGDAIDDLFSAYLNLDNVELLNSPETKVKNFNDIRDDLDSRASG 1222
            +K+   + EGM ERKS+GD++DDLFSAY+NLD+++L NS  T  KN ++ R+DLDSR SG
Sbjct: 232  EKSVDNNLEGMGERKSDGDSVDDLFSAYMNLDHIDLFNSSGTNDKNGHENREDLDSRGSG 291

Query: 1223 TKMSGGDSSDNETGSSANESGCSITQTNLCSSKNK-EAFKRSAGEDIAPANRHRRSVSMD 1399
            TK +GG+SSDNE  SS NESG S     L SS  K E  KR+AG DIAP  RH RSVSMD
Sbjct: 292  TKTNGGESSDNEAESSVNESGDSAQMPGLNSSAEKREGIKRTAGGDIAPTTRHYRSVSMD 351

Query: 1400 SFMGNLPNFGDESLKLSAS--------VANQTSVDGISSNFSLDFANGEFSGPELKKIMA 1555
            SFMG L  FGDES K+  +        +++   VDG S+ FSL+F NGEFSG ELKKIMA
Sbjct: 352  SFMGKL-QFGDESPKMPPTPPGVRPGQLSSNNLVDGNSAPFSLEFGNGEFSGAELKKIMA 410

Query: 1556 NEKLAEIASADPKRAKRILANRQSAARSKERKMRYISELEHKVXXXXXXXXXXXXXXXXX 1735
            N+KLAEIA  DPKRAKRILANRQSAARSKERKMRYISELEHKV                 
Sbjct: 411  NDKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLL 470

Query: 1736 XRDSTGLTSENNELKFXXXXXXXXXXXXXXLNEALTAEVKRLKLVTGESNGEVLRSNRLA 1915
             RDS GLT++NNELKF              LNEALTAEV+RLKL T E N +  ++  ++
Sbjct: 471  QRDSVGLTNQNNELKFRLQAMEQQAQLRDALNEALTAEVQRLKLATTELNAQSHQNGVMS 530

Query: 1916 QLTMNAQMFQAQ 1951
            Q  +N    Q Q
Sbjct: 531  QAAINHHSLQLQ 542


>ref|XP_004148549.1| PREDICTED: uncharacterized protein LOC101216189 [Cucumis sativus]
          Length = 571

 Score =  417 bits (1071), Expect = e-114
 Identities = 262/547 (47%), Positives = 321/547 (58%), Gaps = 14/547 (2%)
 Frame = +2

Query: 353  NGNDAMQRLQSSFGTTQQSSINR-FEMPQLNTSSLQGHG-NMRFFTPNFSPESSNSKRXX 526
            N  +    LQ S+G +  S+ N  F M QL  S +       + F  NF  ++S      
Sbjct: 13   NTENMRNHLQCSYGVSSSSAGNLPFSMDQLKISQMNSSQIRPQHFHSNFLGDNSRRIGIP 72

Query: 527  XXXXXXXXXXXXXFSQIPVSRISTQQPSLQNLSPGPTHSRSLSQPAIFSFDXXXXXXXXX 706
                         +SQIP+SR   QQ    N +P PTHSRSLSQP+ FS D         
Sbjct: 73   PSPNSPQIPPISPYSQIPISRPMNQQ----NYNPVPTHSRSLSQPSFFSLDSLPPLSPSP 128

Query: 707  XXXXXNYRECTPSPVSDSV--DISKEDRDGGMHASQPFSSGRAISVRSGESSLPPRKGHR 880
                  +RE   +  SD V  D S EDRD   H+  P S    ++      SLPPRK HR
Sbjct: 129  ------FRESPTTSNSDQVSADTSMEDRDNSSHSLLPPSPYMRVNSSKMGDSLPPRKAHR 182

Query: 881  RSISDIPFGYATVIQSSPPLIPLSGQGNLNQSAFVRENSGNVNPV-QLVKREGEWDKNGG 1057
            RS SDIPFG +++IQ SP L+P +  G L +S   +EN+G + P  Q VKRE   +K+  
Sbjct: 183  RSNSDIPFGLSSMIQPSP-LLPFNSSGGLERSTSSKENAGLLKPSSQFVKREHSLEKSVD 241

Query: 1058 KSAEGMDERKSEGDAIDDLFSAYLNLDNVELLNSPETKVKNFNDIRDDLDSRASGTKMSG 1237
             + EGM ERKS+GD++DDLFSAY+NLD+++L NS  T  KN ++ R+DLDSR SGTK +G
Sbjct: 242  NNLEGMGERKSDGDSVDDLFSAYMNLDHIDLFNSSGTNDKNGHENREDLDSRGSGTKTNG 301

Query: 1238 GDSSDNETGSSANESGCSITQTNLCSSKNK-EAFKRSAGEDIAPANRHRRSVSMDSFMGN 1414
            G+SSDNE  SS NESG S     L SS  K E  KR+AG DIAP  RH RSVSMDSFMG 
Sbjct: 302  GESSDNEAESSVNESGDSAQMPGLNSSAEKREGIKRTAGGDIAPTTRHYRSVSMDSFMGK 361

Query: 1415 LPNFGDESLKLSAS--------VANQTSVDGISSNFSLDFANGEFSGPELKKIMANEKLA 1570
            L  FGDES K+  +        +++   VDG S+ FSL+F NGEFSG ELKKIMAN+KLA
Sbjct: 362  L-QFGDESPKMPPTPPGVRPGQLSSNNLVDGNSAPFSLEFGNGEFSGAELKKIMANDKLA 420

Query: 1571 EIASADPKRAKRILANRQSAARSKERKMRYISELEHKVXXXXXXXXXXXXXXXXXXRDST 1750
            EIA  DPKRAKRILANRQSAARSKERKMRYISELEHKV                  RDS 
Sbjct: 421  EIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSV 480

Query: 1751 GLTSENNELKFXXXXXXXXXXXXXXLNEALTAEVKRLKLVTGESNGEVLRSNRLAQLTMN 1930
            GLT++NNELKF              LNEALTAEV+RLKL T E N +  ++  ++Q  +N
Sbjct: 481  GLTNQNNELKFRLQAMEQQAQLRDALNEALTAEVQRLKLATTELNAQSHQNGVMSQAAIN 540

Query: 1931 AQMFQAQ 1951
                Q Q
Sbjct: 541  HHSLQLQ 547


Top