BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017264
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603240.1| Eukaryotic translation initiation factor 3 s...   266   1e-69
gb|AEL98639.1| putative translation initiation factor 3 subunit ...   265   4e-69
gb|ABK25119.1| unknown [Picea sitchensis]                             263   1e-68
gb|AEL98640.1| putative translation initiation factor 3 subunit ...   261   4e-68
ref|XP_002285591.1| PREDICTED: eukaryotic translation initiation...   261   4e-68

>ref|XP_003603240.1| Eukaryotic translation initiation factor 3 subunit B [Medicago
           truncatula] gi|355492288|gb|AES73491.1| Eukaryotic
           translation initiation factor 3 subunit B [Medicago
           truncatula]
          Length = 731

 Score =  266 bits (680), Expect = 1e-69
 Identities = 130/175 (74%), Positives = 148/175 (84%), Gaps = 4/175 (2%)
 Frame = +2

Query: 2   LQQWLTD-KERDHFVIRAVSDTKVLWNDPRQLKPELVSRLSFWTDNLVQWSRHGTYLATV 178
           LQQWLTD K RD FVIRA SDT+VLWND + LKP+ V + +FWT++ VQWS  GTYLATV
Sbjct: 186 LQQWLTDAKARDQFVIRAGSDTEVLWNDAKLLKPDPVYKRAFWTESFVQWSPLGTYLATV 245

Query: 179 LRQGAVVWGGATTFKRLMRYPHPQVKLIDFSPGEKFLVTYSSHKPSNSCDSHRFVLNIFD 358
            RQGA VWGGATTF RLMRY HPQVKLIDFSPGEK+LVTYSSH+PSN  D++R V+NIFD
Sbjct: 246 HRQGAAVWGGATTFNRLMRYAHPQVKLIDFSPGEKYLVTYSSHEPSNPRDANRVVINIFD 305

Query: 359 VRTGKVMRKFEGSADDIA---TGGQSGVSWPVMRWTGGNNDKYFARMGKNVISVY 514
           VRTGKVMR F+GSADD A   TGG +GVSWPV +W+GG +DKYFARMGKNV+SVY
Sbjct: 306 VRTGKVMRDFKGSADDFAIGGTGGVTGVSWPVFKWSGGRDDKYFARMGKNVLSVY 360


>gb|AEL98639.1| putative translation initiation factor 3 subunit B, partial [Silene
           latifolia]
          Length = 517

 Score =  265 bits (676), Expect = 4e-69
 Identities = 126/175 (72%), Positives = 146/175 (83%), Gaps = 4/175 (2%)
 Frame = +2

Query: 2   LQQWLTD-KERDHFVIRAVSDTKVLWNDPRQLKPELVSRLSFWTDNLVQWSRHGTYLATV 178
           LQ+WLTD K RD FVIRA  DT+VLWND RQLKP+LV + SFWTD+ VQWS  GTYLAT+
Sbjct: 164 LQRWLTDAKARDQFVIRAGQDTEVLWNDARQLKPDLVHKRSFWTDSYVQWSPLGTYLATI 223

Query: 179 LRQGAVVWGGATTFKRLMRYPHPQVKLIDFSPGEKFLVTYSSHKPSNSCDSHRFVLNIFD 358
            RQGA VWGGA+TF+RLMRY HPQVKLIDFSPGEKF+VTYSSH+PSN  D+HR VLNIFD
Sbjct: 224 HRQGAAVWGGASTFERLMRYIHPQVKLIDFSPGEKFIVTYSSHEPSNPRDTHRVVLNIFD 283

Query: 359 VRTGKVMRKFEGSADDIATGGQ---SGVSWPVMRWTGGNNDKYFARMGKNVISVY 514
            RTGKV R F+GSAD+ A GG    +G+SWP+ +W GG +DKYFAR+GKNV+SVY
Sbjct: 284 TRTGKVKRDFKGSADEFAVGGAGGLTGISWPIFKWAGGRDDKYFARIGKNVVSVY 338


>gb|ABK25119.1| unknown [Picea sitchensis]
          Length = 724

 Score =  263 bits (671), Expect = 1e-68
 Identities = 126/175 (72%), Positives = 144/175 (82%), Gaps = 4/175 (2%)
 Frame = +2

Query: 2   LQQWLTD-KERDHFVIRAVSDTKVLWNDPRQLKPELVSRLSFWTDNLVQWSRHGTYLATV 178
           LQQWLTD K RD +VIR+ +DT+V WNDPRQLKPELV R  +WT++ VQWS  GTYLATV
Sbjct: 176 LQQWLTDEKGRDQYVIRSNTDTEVYWNDPRQLKPELVYRRGYWTESFVQWSSLGTYLATV 235

Query: 179 LRQGAVVWGGATTFKRLMRYPHPQVKLIDFSPGEKFLVTYSSHKPSNSCDSHRFVLNIFD 358
            RQGA +WGG TTF RLMR+ HPQVKLIDFSPGE FLVTYSSH+PSN  D+ R  LNIF+
Sbjct: 236 HRQGAAIWGGGTTFNRLMRFAHPQVKLIDFSPGENFLVTYSSHEPSNPRDTQRVTLNIFE 295

Query: 359 VRTGKVMRKFEGSADDIATGGQ---SGVSWPVMRWTGGNNDKYFARMGKNVISVY 514
           VRTGKV+R+F+GSADD ATGG    +GVSWPV RW GG +DKYFAR+GKN ISVY
Sbjct: 296 VRTGKVLREFKGSADDFATGGTGGVAGVSWPVFRWAGGRDDKYFARIGKNAISVY 350


>gb|AEL98640.1| putative translation initiation factor 3 subunit B, partial [Silene
           latifolia]
          Length = 517

 Score =  261 bits (667), Expect = 4e-68
 Identities = 125/175 (71%), Positives = 144/175 (82%), Gaps = 4/175 (2%)
 Frame = +2

Query: 2   LQQWLTD-KERDHFVIRAVSDTKVLWNDPRQLKPELVSRLSFWTDNLVQWSRHGTYLATV 178
           LQ+WLTD K RD FVIRA  DT+VLWND RQLKP+LV + SFWTD+ VQWS  GTYLAT+
Sbjct: 164 LQRWLTDAKARDQFVIRAGQDTEVLWNDARQLKPDLVHKRSFWTDSYVQWSPLGTYLATI 223

Query: 179 LRQGAVVWGGATTFKRLMRYPHPQVKLIDFSPGEKFLVTYSSHKPSNSCDSHRFVLNIFD 358
            RQGA VWGGA+TF RLMRY HPQVKLIDFSPGEKF+VTYSSH+PSN  D+HR  LNIFD
Sbjct: 224 HRQGAAVWGGASTFDRLMRYIHPQVKLIDFSPGEKFIVTYSSHEPSNPRDTHRVGLNIFD 283

Query: 359 VRTGKVMRKFEGSADDIATGGQ---SGVSWPVMRWTGGNNDKYFARMGKNVISVY 514
            RTGKV R F+GSAD+ A GG    +G+SWP+ +W GG +DKYFAR+GKNV+SVY
Sbjct: 284 TRTGKVKRDFKGSADEFAVGGAGGLTGISWPIFKWAGGRDDKYFARIGKNVVSVY 338


>ref|XP_002285591.1| PREDICTED: eukaryotic translation initiation factor 3 subunit B
           [Vitis vinifera] gi|296082169|emb|CBI21174.3| unnamed
           protein product [Vitis vinifera]
          Length = 718

 Score =  261 bits (667), Expect = 4e-68
 Identities = 128/175 (73%), Positives = 142/175 (81%), Gaps = 4/175 (2%)
 Frame = +2

Query: 2   LQQWLTD-KERDHFVIRAVSDTKVLWNDPRQLKPELVSRLSFWTDNLVQWSRHGTYLATV 178
           LQ WLTD K RD FVIRA SDT+VLWND R LKPE V + ++WT++ VQWS  GTYLATV
Sbjct: 171 LQHWLTDEKARDQFVIRAGSDTEVLWNDARHLKPEPVYKRAYWTESFVQWSPLGTYLATV 230

Query: 179 LRQGAVVWGGATTFKRLMRYPHPQVKLIDFSPGEKFLVTYSSHKPSNSCDSHRFVLNIFD 358
            RQGA VWGGAT F RLMRY HPQVKLIDFSPGEK+LVTYSSH+PSN  D+HR VLN+FD
Sbjct: 231 HRQGAAVWGGATAFNRLMRYAHPQVKLIDFSPGEKYLVTYSSHEPSNPRDTHRVVLNVFD 290

Query: 359 VRTGKVMRKFEGSADDIATGGQ---SGVSWPVMRWTGGNNDKYFARMGKNVISVY 514
           VRTGKVMR F+GS D+ + GG    SGVSWPV RW GG  DKYFAR+GKNVISVY
Sbjct: 291 VRTGKVMRDFKGSMDEFSVGGAGGVSGVSWPVFRWGGGKEDKYFARIGKNVISVY 345