BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017259
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC68598.1| hypothetical protein OsI_36954 [Oryza sativa Indi...   109   3e-22
gb|EEE55079.1| hypothetical protein OsJ_02812 [Oryza sativa Japo...   101   9e-20
gb|EEC71179.1| hypothetical protein OsI_03059 [Oryza sativa Indi...   101   9e-20
ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   100   1e-19
ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   100   1e-19

>gb|EEC68598.1| hypothetical protein OsI_36954 [Oryza sativa Indica Group]
          Length = 909

 Score =  109 bits (273), Expect = 3e-22
 Identities = 62/158 (39%), Positives = 85/158 (53%), Gaps = 1/158 (0%)
 Frame = +3

Query: 18  FRRQIRSYNHVFSFTSMGVQFDRDLANEEQGVYTFRAQGGVYHRIGSLTPAEGTKPRFLQ 197
           FR  IR +N  F+FTS+GV  D+   N   GVYTFRAQG +YHRI  L P +   PR LQ
Sbjct: 320 FRENIRYFNSHFAFTSLGVTLDQRYCNGSSGVYTFRAQGQIYHRIDQLQPGD-NGPRHLQ 378

Query: 198 MYIYDTDHELQHRMSENDGLNLEIVQKIKTALDANCFVGVLRQIGQRDDIAQCRLIIKEQ 377
           +Y YDTD +L HR   +  L++ +V+ I   L+ N +V   RQ+G   ++   R+ +   
Sbjct: 379 LYFYDTDADLSHRSRRSPDLDINVVRNILGILEHNPYVHTFRQMGSVPNLDDYRISLNTN 438

Query: 378 SP-HQRQYSLPSASQXXXXXXXXXDEEINSGREIIVQG 488
               QR Y+ P+ASQ         D      R +IV G
Sbjct: 439 IVLDQRVYNAPTASQVAAIWIDGNDPRNQFDRSVIVFG 476


>gb|EEE55079.1| hypothetical protein OsJ_02812 [Oryza sativa Japonica Group]
          Length = 1107

 Score =  101 bits (252), Expect = 9e-20
 Identities = 50/140 (35%), Positives = 80/140 (57%), Gaps = 1/140 (0%)
 Frame = +3

Query: 3   PIGRDFRRQIRSYNHVFSFTSMGVQFDRDLANEEQGVYTFRAQGGVYHRIGSLTPAEGTK 182
           P  + FR   R +N  FSFT++GV  D+  AN   GVYTFRA G +YH I S +P + + 
Sbjct: 384 PDAKHFRDNNRYFNGHFSFTTLGVSLDKAFANMSSGVYTFRAHGQIYHNIHSFSPRD-SG 442

Query: 183 PRFLQMYIYDTDHELQHRMSENDGLNLEIVQKIKTALDANCFVGVLRQIGQRDDIAQCRL 362
           P  L++Y YD D  L HR   +  L+ ++++ +   L  N +    R +GQ +D+A  R+
Sbjct: 443 PEHLELYFYDDDPTLSHRFQRSPSLDQDVIRTVADVLRNNPYSETFRSLGQAEDLANYRV 502

Query: 363 IIK-EQSPHQRQYSLPSASQ 419
            +  +   HQR+Y++P  ++
Sbjct: 503 TLNLDHRLHQRRYNVPVTTE 522


>gb|EEC71179.1| hypothetical protein OsI_03059 [Oryza sativa Indica Group]
          Length = 651

 Score =  101 bits (252), Expect = 9e-20
 Identities = 50/140 (35%), Positives = 80/140 (57%), Gaps = 1/140 (0%)
 Frame = +3

Query: 3   PIGRDFRRQIRSYNHVFSFTSMGVQFDRDLANEEQGVYTFRAQGGVYHRIGSLTPAEGTK 182
           P  + FR   R +N  FSFT++GV  D+  AN   GVYTFRA G +YH I S +P + + 
Sbjct: 327 PDAKHFRDNNRYFNGHFSFTTLGVSLDKAFANMSSGVYTFRAHGQIYHNIHSFSPRD-SG 385

Query: 183 PRFLQMYIYDTDHELQHRMSENDGLNLEIVQKIKTALDANCFVGVLRQIGQRDDIAQCRL 362
           P  L++Y YD D  L HR   +  L+ ++++ +   L  N +    R +GQ +D+A  R+
Sbjct: 386 PEHLELYFYDDDPTLSHRFQRSPSLDQDVIRTVADVLRNNPYSETFRSLGQAEDLANYRV 445

Query: 363 IIK-EQSPHQRQYSLPSASQ 419
            +  +   HQR+Y++P  ++
Sbjct: 446 TLNLDHRLHQRRYNVPVTTE 465


>ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355510179|gb|AES91321.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1558

 Score =  100 bits (250), Expect = 1e-19
 Identities = 58/167 (34%), Positives = 98/167 (58%), Gaps = 11/167 (6%)
 Frame = +3

Query: 18  FRRQIRSYNHVFSFTSMGVQFDRDLANEEQGVYTFRAQGGVYHRIGSLTPAEGTKPRFLQ 197
           FR +IR+YN +F+FTSMG + D  + N   G Y ++  G  YHRIG L P +G +P+F Q
Sbjct: 70  FREKIRAYNSIFAFTSMGAKIDNTV-NLRPGPYVYKISGQNYHRIGGLIPGQGKQPKFSQ 128

Query: 198 MYIYDTDHELQHRMSENDG------LNLEIVQKIKTALDANCFVGVLRQIGQ----RDDI 347
           +Y++DT++E+Q+R+S  +G      L+ +IV+++K  LD N  V  L ++ +      D 
Sbjct: 129 LYVHDTENEIQNRLSSLNGGKTARDLDADIVRRLKDMLDMNNSVAKLFRMARDRLSAPDN 188

Query: 348 AQCRL-IIKEQSPHQRQYSLPSASQXXXXXXXXXDEEINSGREIIVQ 485
            + R+ +I  +S   RQY+ P+A++          E  N  R+I+++
Sbjct: 189 KEVRIRLIGTRSNDSRQYTTPTATEIVGLIVGDFGES-NGRRDIVIE 234


>ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355507968|gb|AES89110.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1558

 Score =  100 bits (250), Expect = 1e-19
 Identities = 58/167 (34%), Positives = 98/167 (58%), Gaps = 11/167 (6%)
 Frame = +3

Query: 18  FRRQIRSYNHVFSFTSMGVQFDRDLANEEQGVYTFRAQGGVYHRIGSLTPAEGTKPRFLQ 197
           FR +IR+YN +F+FTSMG + D  + N   G Y ++  G  YHRIG L P +G +P+F Q
Sbjct: 70  FREKIRAYNSIFAFTSMGAKIDNTV-NLRPGPYVYKISGQNYHRIGGLIPGQGKQPKFSQ 128

Query: 198 MYIYDTDHELQHRMSENDG------LNLEIVQKIKTALDANCFVGVLRQIGQ----RDDI 347
           +Y++DT++E+Q+R+S  +G      L+ +IV+++K  LD N  V  L ++ +      D 
Sbjct: 129 LYVHDTENEIQNRLSSLNGGKTARDLDADIVRRLKDMLDMNNSVAKLFRMARDRLSAPDN 188

Query: 348 AQCRL-IIKEQSPHQRQYSLPSASQXXXXXXXXXDEEINSGREIIVQ 485
            + R+ +I  +S   RQY+ P+A++          E  N  R+I+++
Sbjct: 189 KEVRIRLIGTRSNDSRQYTTPTATEIAGLIVGDFGES-NGRRDIVIE 234