BLASTX nr result

ID: Coptis25_contig00017240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017240
         (1194 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267065.1| PREDICTED: probable leucine-rich repeat rece...   174   5e-41
ref|XP_002271307.2| PREDICTED: probable LRR receptor-like serine...   167   5e-39
emb|CBI29035.3| unnamed protein product [Vitis vinifera]              167   5e-39
emb|CBI27339.3| unnamed protein product [Vitis vinifera]              165   2e-38
ref|XP_003633525.1| PREDICTED: probable leucine-rich repeat rece...   163   9e-38

>ref|XP_002267065.1| PREDICTED: probable leucine-rich repeat receptor-like protein kinase
            At1g35710 [Vitis vinifera] gi|147859823|emb|CAN79273.1|
            hypothetical protein VITISV_014885 [Vitis vinifera]
          Length = 736

 Score =  174 bits (440), Expect = 5e-41
 Identities = 113/292 (38%), Positives = 165/292 (56%), Gaps = 3/292 (1%)
 Frame = +2

Query: 326  GAIPSQICEWLRYLVNLDLSNNHLSGPVPQQLVKCKYXXXXXXXXXXXXXXXXYKLPPFV 505
            G+IPS+I   L+ LV+L L NN L G +P++L  C                        +
Sbjct: 243  GSIPSEIGS-LKKLVDLALDNNKLVGVIPKELGNCHS----------------------L 279

Query: 506  QALNLSDNSLSGSIPSRICHWYSPIISLDLSRNRLSGQIPPELVTCNNLKTLVLSYNHLS 685
            + L++  N L+GSIPS I    + +  LDLS N +SG IP +    N+L+ L LSYN+L 
Sbjct: 280  RYLSMKFNRLNGSIPSEIGGLVA-LRKLDLSVNNISGTIPLQFQNFNSLEYLDLSYNYLE 338

Query: 686  GPVPNQLSRFIQGDSSMSFGNNKGLCADFE-GLPSCHSTSKKHKVIMFIVIPIVSTFLVA 862
            G VP +L          +F +NKGLC D + G+P C   ++   +I+ +VI + S  L++
Sbjct: 339  GYVPFELHL---PSLFRAFEHNKGLCGDTKFGIPPCRKRNRI-TIIIIVVICLCSALLIS 394

Query: 863  LLIIGVRYICRKKRRTSEEIEVKETNHGDLFSIWRYDGKIAYKKLLDATEGFNSKXXXXX 1042
             +I GV  I R+K R  +  E   T +GD+FSIW YDGKIAY+ +++ATE F+ K     
Sbjct: 395  SIIFGVLLIWRRKTRKLQPEEATTTQNGDIFSIWDYDGKIAYEDIIEATEDFDIKYCIGT 454

Query: 1043 XXXXXVYKANLPSGETVAIKKFHQSLEQN--YERSFGNEIKILTSIRHRSIV 1192
                 VY+A L +G+ VA+KK H    QN  Y +SF NE+++L+ IRHR+IV
Sbjct: 455  GGYGSVYRAKLTNGKEVALKKLHTLESQNPTYMKSFTNEVRVLSKIRHRNIV 506


>ref|XP_002271307.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At4g08850-like [Vitis vinifera]
          Length = 843

 Score =  167 bits (423), Expect = 5e-39
 Identities = 112/296 (37%), Positives = 166/296 (56%), Gaps = 7/296 (2%)
 Frame = +2

Query: 326  GAIPSQICEWLRYLVNLDLSNNHLSGPVPQQLVKCKYXXXXXXXXXXXXXXXXYKLPPF- 502
            G+IP  I   L+ L++L L +N+L+G +P  L    +                  +    
Sbjct: 331  GSIPPIIWN-LKNLIHLRLDHNNLTGVIPSSLGYLIHLNEFNISGNRINGHIPSTIGNLN 389

Query: 503  -VQALNLSDNSLSGSIPSRICHWYSPIISLDLSRNRLSGQIPPELVTCNNLKTLVLSYNH 679
             +  L+LS N + G IPS++ +    +  L+LS N+LSG IP  L+  +   +L LS+N 
Sbjct: 390  NLTRLDLSANLIHGKIPSQVQN-LKRLTYLNLSHNKLSGSIPTLLIYDHIKPSLDLSHND 448

Query: 680  LSGPVPNQL-SRFIQGDSSMSFGNNKGLCADFEGLPSCHSTSKKHKVIMFIVIPIVSTFL 856
            L G +P +L S+F QG    SF NNKGLC D +GLP C    +++K    IVI + +T  
Sbjct: 449  LEGHIPFELQSKFSQG----SFDNNKGLCGDIKGLPHC---KEEYKTTRIIVISLSTTLF 501

Query: 857  VALLIIGVRYICRKKRRTSEEIEVKE--TNHGDLFSIWRYDGKIAYKKLLDATEGFNSKX 1030
            +  +++G   + RK R+    I+ KE  T +GD+FS+W YDGKIAY+ ++ ATE F+ K 
Sbjct: 502  LFFVVLGFLLLSRKTRK----IQTKEIPTKNGDIFSVWNYDGKIAYEDIIKATEDFDIKY 557

Query: 1031 XXXXXXXXXVYKANLPSGETVAIKKFH--QSLEQNYERSFGNEIKILTSIRHRSIV 1192
                     VYKA LP+G  VA+KK H  +  E  Y +SF NE++IL+ IRHR+IV
Sbjct: 558  CIGTGGYGSVYKAQLPTGNVVALKKLHGWERDEAIYLKSFQNEVQILSKIRHRNIV 613



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 52/156 (33%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
 Frame = +2

Query: 326 GAIPSQICEWLRYLVNLDLSNNH-LSGPVPQQLVKCKYXXXXXXXXXXXXXXXXYKLPPF 502
           G IPS +  +L+ L++LDLS N+ LSG +P  L   K                 Y++   
Sbjct: 162 GVIPSSL-GYLKNLIHLDLSFNYGLSGVIPSSLGYLKNLKYLDLSINEINGSIPYQIGNL 220

Query: 503 --VQALNLSDNSLSGSIPSRICHWYSPIISLDLSRNRLSGQIPPELVTCNNLKTLVLSYN 676
             +  L L  NSLSG IPS + +  S +  L L+ NR++G IP E+    NL  L  S+N
Sbjct: 221 KNLTHLYLVSNSLSGVIPSSLAN-LSNLEYLFLNFNRINGSIPSEIGNLKNLVQLCFSHN 279

Query: 677 HLSGPVPNQLSRF------------IQGDSSMSFGN 748
            L G +P  L               IQG   +SFG+
Sbjct: 280 SLIGTIPPSLGHLTNLTYLHLFNNQIQGGIPLSFGH 315


>emb|CBI29035.3| unnamed protein product [Vitis vinifera]
          Length = 789

 Score =  167 bits (423), Expect = 5e-39
 Identities = 112/296 (37%), Positives = 166/296 (56%), Gaps = 7/296 (2%)
 Frame = +2

Query: 326  GAIPSQICEWLRYLVNLDLSNNHLSGPVPQQLVKCKYXXXXXXXXXXXXXXXXYKLPPF- 502
            G+IP  I   L+ L++L L +N+L+G +P  L    +                  +    
Sbjct: 277  GSIPPIIWN-LKNLIHLRLDHNNLTGVIPSSLGYLIHLNEFNISGNRINGHIPSTIGNLN 335

Query: 503  -VQALNLSDNSLSGSIPSRICHWYSPIISLDLSRNRLSGQIPPELVTCNNLKTLVLSYNH 679
             +  L+LS N + G IPS++ +    +  L+LS N+LSG IP  L+  +   +L LS+N 
Sbjct: 336  NLTRLDLSANLIHGKIPSQVQN-LKRLTYLNLSHNKLSGSIPTLLIYDHIKPSLDLSHND 394

Query: 680  LSGPVPNQL-SRFIQGDSSMSFGNNKGLCADFEGLPSCHSTSKKHKVIMFIVIPIVSTFL 856
            L G +P +L S+F QG    SF NNKGLC D +GLP C    +++K    IVI + +T  
Sbjct: 395  LEGHIPFELQSKFSQG----SFDNNKGLCGDIKGLPHC---KEEYKTTRIIVISLSTTLF 447

Query: 857  VALLIIGVRYICRKKRRTSEEIEVKE--TNHGDLFSIWRYDGKIAYKKLLDATEGFNSKX 1030
            +  +++G   + RK R+    I+ KE  T +GD+FS+W YDGKIAY+ ++ ATE F+ K 
Sbjct: 448  LFFVVLGFLLLSRKTRK----IQTKEIPTKNGDIFSVWNYDGKIAYEDIIKATEDFDIKY 503

Query: 1031 XXXXXXXXXVYKANLPSGETVAIKKFH--QSLEQNYERSFGNEIKILTSIRHRSIV 1192
                     VYKA LP+G  VA+KK H  +  E  Y +SF NE++IL+ IRHR+IV
Sbjct: 504  CIGTGGYGSVYKAQLPTGNVVALKKLHGWERDEAIYLKSFQNEVQILSKIRHRNIV 559



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 52/156 (33%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
 Frame = +2

Query: 326 GAIPSQICEWLRYLVNLDLSNNH-LSGPVPQQLVKCKYXXXXXXXXXXXXXXXXYKLPPF 502
           G IPS +  +L+ L++LDLS N+ LSG +P  L   K                 Y++   
Sbjct: 108 GVIPSSL-GYLKNLIHLDLSFNYGLSGVIPSSLGYLKNLKYLDLSINEINGSIPYQIGNL 166

Query: 503 --VQALNLSDNSLSGSIPSRICHWYSPIISLDLSRNRLSGQIPPELVTCNNLKTLVLSYN 676
             +  L L  NSLSG IPS + +  S +  L L+ NR++G IP E+    NL  L  S+N
Sbjct: 167 KNLTHLYLVSNSLSGVIPSSLAN-LSNLEYLFLNFNRINGSIPSEIGNLKNLVQLCFSHN 225

Query: 677 HLSGPVPNQLSRF------------IQGDSSMSFGN 748
            L G +P  L               IQG   +SFG+
Sbjct: 226 SLIGTIPPSLGHLTNLTYLHLFNNQIQGGIPLSFGH 261


>emb|CBI27339.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  165 bits (417), Expect = 2e-38
 Identities = 117/317 (36%), Positives = 164/317 (51%), Gaps = 29/317 (9%)
 Frame = +2

Query: 326  GAIPSQICEWLRYLVNLDLSNNHLSGPVPQQLVKCKYXXXXXXXXXXXXXXXXYKLPPFV 505
            G IP QI   L  L +LDLS+N LSG +P  L                       L   V
Sbjct: 99   GDIPHQIGT-LTKLTHLDLSHNFLSGELPLSLTN---------------------LTKLV 136

Query: 506  QALNLSDNSLSGSIPSRI------------CHWYSPII--------------SLDLSRNR 607
            + LNL  N +SG IPS I            C++ + +I               LDLS N 
Sbjct: 137  E-LNLGYNHISGQIPSEIGNLRNLVGLVLDCNYLNGVIPSIPSEIGGLVALRKLDLSVNN 195

Query: 608  LSGQIPPELVTCNNLKTLVLSYNHLSGPVPNQLSRFIQGDSSMSFGNNKGLCADFE-GLP 784
            +SG IP +    N+L+ L LSYN+L G VP +L          +F +NKGLC D + G+P
Sbjct: 196  ISGTIPLQFQNFNSLEYLDLSYNYLEGYVPFELHL---PSLFRAFEHNKGLCGDTKFGIP 252

Query: 785  SCHSTSKKHKVIMFIVIPIVSTFLVALLIIGVRYICRKKRRTSEEIEVKETNHGDLFSIW 964
             C   ++   +I+ +VI + S  L++ +I GV  I R+K R  +  E   T +GD+FSIW
Sbjct: 253  PCRKRNRI-TIIIIVVICLCSALLISSIIFGVLLIWRRKTRKLQPEEATTTQNGDIFSIW 311

Query: 965  RYDGKIAYKKLLDATEGFNSKXXXXXXXXXXVYKANLPSGETVAIKKFHQSLEQN--YER 1138
             YDGKIAY+ +++ATE F+ K          VY+A L +G+ VA+KK H    QN  Y +
Sbjct: 312  DYDGKIAYEDIIEATEDFDIKYCIGTGGYGSVYRAKLTNGKEVALKKLHTLESQNPTYMK 371

Query: 1139 SFGNEIKILTSIRHRSI 1189
            SF NE+++L+ IRHR+I
Sbjct: 372  SFTNEVRVLSKIRHRNI 388


>ref|XP_003633525.1| PREDICTED: probable leucine-rich repeat receptor-like protein kinase
            At1g35710-like [Vitis vinifera]
          Length = 1378

 Score =  163 bits (412), Expect = 9e-38
 Identities = 111/317 (35%), Positives = 167/317 (52%), Gaps = 6/317 (1%)
 Frame = +2

Query: 260  IPDSLQFCKXXXXXXXXXXXXXGAIPSQICEWLRYLVNLDLSNNHLSGPVPQQLVKCKYX 439
            IP  L   K             G IP +    L  LV+L+L++NHLSGP+PQQ+   +  
Sbjct: 826  IPKELGMLKSLFNLVIDNNKLSGNIPLEFGN-LSDLVHLNLASNHLSGPIPQQVRNFRKL 884

Query: 440  XXXXXXXXXXXXXXXYKLPPFV--QALNLSDNSLSGSIPSRICHWYSPIISLDLSRNRLS 613
                            ++   +  ++L+L  N L+G IP ++    S + +L+LS N LS
Sbjct: 885  LSLNLSNNKFGESIPAEIGNVITLESLDLCQNMLTGEIPQQLGELQS-LETLNLSHNNLS 943

Query: 614  GQIPPELVTCNNLKTLVLSYNHLSGPVPNQLSRFIQGDSSMSFGNNKGLCADFEGLPSCH 793
            G IPP       L ++ +SYN L GP+PN L  F       +  NNKGLC +  GL +C+
Sbjct: 944  GTIPPTFDDLRGLTSINISYNQLEGPLPN-LKAFRDAPFE-ALRNNKGLCGNITGLEACN 1001

Query: 794  STSKK-HKVIMFIVIPIVSTFLVALLIIGVRYICRKKRRTSEEIEVKET-NHGDLFSIWR 967
            +  KK +K  + I++ I+S  L++ +  G+ ++ R  R  S +I  +E   H DLF+IW 
Sbjct: 1002 TGKKKGNKFFLLIILLILSIPLLSFISYGIYFLRRMVR--SRKINSREVATHQDLFAIWG 1059

Query: 968  YDGKIAYKKLLDATEGFNSKXXXXXXXXXXVYKANLPSGETVAIKKFH--QSLEQNYERS 1141
            +DG++ Y+ +++ TE FNSK          VYKA LP+G  VA+KK H  Q  E    ++
Sbjct: 1060 HDGEMLYEHIIEGTEDFNSKNCIGTGGYGTVYKAELPTGRVVAVKKLHSTQDGEMADLKA 1119

Query: 1142 FGNEIKILTSIRHRSIV 1192
            F +EI  L  IRHR+IV
Sbjct: 1120 FKSEIHALAEIRHRNIV 1136



 Score = 63.9 bits (154), Expect = 7e-08
 Identities = 48/131 (36%), Positives = 61/131 (46%)
 Frame = +2

Query: 326 GAIPSQICEWLRYLVNLDLSNNHLSGPVPQQLVKCKYXXXXXXXXXXXXXXXXYKLPPFV 505
           G IP +I   LR L +L+LS N+LSGP+P  +   +                       +
Sbjct: 185 GLIPQEI-GLLRSLNDLELSTNNLSGPIPPSIGNLRN----------------------L 221

Query: 506 QALNLSDNSLSGSIPSRICHWYSPIISLDLSRNRLSGQIPPELVTCNNLKTLVLSYNHLS 685
             L L  N LSGSIP  I    S +  L LS N LSG IPP +    NL TL L  N LS
Sbjct: 222 TTLYLHRNELSGSIPQEIGLLRS-LNDLQLSTNNLSGPIPPSIENLRNLTTLYLYQNELS 280

Query: 686 GPVPNQLSRFI 718
           G +P ++   I
Sbjct: 281 GSIPQEIGLLI 291



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 45/149 (30%), Positives = 72/149 (48%)
 Frame = +2

Query: 260 IPDSLQFCKXXXXXXXXXXXXXGAIPSQICEWLRYLVNLDLSNNHLSGPVPQQLVKCKYX 439
           IP  + F +             G+IP+ I   +  L  L +S N LSG +PQ++   K  
Sbjct: 586 IPREVGFLRSLFALDSSNNKLTGSIPTSIGNLVN-LTTLHISKNQLSGSIPQEVGWLKS- 643

Query: 440 XXXXXXXXXXXXXXXYKLPPFVQALNLSDNSLSGSIPSRICHWYSPIISLDLSRNRLSGQ 619
                                +  L+LSDN ++GSIP+ I +    +  L LS N+++G 
Sbjct: 644 ---------------------LDKLDLSDNKITGSIPASIGN-LGNLTVLYLSDNKINGS 681

Query: 620 IPPELVTCNNLKTLVLSYNHLSGPVPNQL 706
           IPPE+     L++L LS NHL+G +P+++
Sbjct: 682 IPPEMRHLTRLRSLELSENHLTGQLPHEI 710



 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 17/146 (11%)
 Frame = +2

Query: 326 GAIPSQICEWLRYLVNLDLSNNHLSGPVPQQLVKCKYXXXXXXXXXXXXXXXXY------ 487
           G IP  I   LR L NL L NN LSGP+PQ++   +                        
Sbjct: 401 GPIPPSIGN-LRNLTNLYLYNNELSGPIPQEIGLLRSLIELDLSDNNLTGSTPTSIGNLG 459

Query: 488 -KLPPFVQA----------LNLSDNSLSGSIPSRICHWYSPIISLDLSRNRLSGQIPPEL 634
            KL  F+ +          L+LS+N+L GSIP+ I +  S +++L +  N+L+G IP ++
Sbjct: 460 NKLSGFIPSEIGLLRSLKDLDLSNNNLIGSIPTSIGN-LSNLVTLFVHSNKLNGSIPQDI 518

Query: 635 VTCNNLKTLVLSYNHLSGPVPNQLSR 712
              ++L  L LS N+LSG +P+ L +
Sbjct: 519 HLLSSLSVLALSNNNLSGIIPHSLGK 544



 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 46/127 (36%), Positives = 60/127 (47%)
 Frame = +2

Query: 326 GAIPSQICEWLRYLVNLDLSNNHLSGPVPQQLVKCKYXXXXXXXXXXXXXXXXYKLPPFV 505
           G IP +I   LR L +L+LS N+LSGP+P  +   +                       +
Sbjct: 329 GLIPQEI-GLLRSLNDLELSTNNLSGPIPPSIGNLRN----------------------L 365

Query: 506 QALNLSDNSLSGSIPSRICHWYSPIISLDLSRNRLSGQIPPELVTCNNLKTLVLSYNHLS 685
             L L  N LS SIP  I    S + +L LS N LSG IPP +    NL  L L  N LS
Sbjct: 366 TTLYLHRNELSSSIPQEIGLLRS-LNNLALSTNNLSGPIPPSIGNLRNLTNLYLYNNELS 424

Query: 686 GPVPNQL 706
           GP+P ++
Sbjct: 425 GPIPQEI 431


Top