BLASTX nr result

ID: Coptis25_contig00017223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017223
         (789 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520881.1| conserved hypothetical protein [Ricinus comm...   211   1e-52
ref|XP_002325928.1| predicted protein [Populus trichocarpa] gi|2...   209   5e-52
emb|CBI25354.3| unnamed protein product [Vitis vinifera]              204   1e-50
ref|XP_002275253.1| PREDICTED: U-box domain-containing protein 6...   204   1e-50
ref|XP_004169317.1| PREDICTED: U-box domain-containing protein 6...   204   2e-50

>ref|XP_002520881.1| conserved hypothetical protein [Ricinus communis]
           gi|223540012|gb|EEF41590.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 394

 Score =  211 bits (538), Expect = 1e-52
 Identities = 108/152 (71%), Positives = 120/152 (78%), Gaps = 2/152 (1%)
 Frame = -2

Query: 788 LQHVFKMKVCYTCQQSVTEDSVAPNLSLRSAILAFRREEELSSCRASKKRRERFEQDKSS 609
           +QH+ + K CYTC QS TEDSVAPNLSLR+A+ AFRREEEL   R+SK++RERF+QDK  
Sbjct: 243 IQHIIRTKACYTCSQSTTEDSVAPNLSLRAAVQAFRREEELQFYRSSKRKRERFDQDKGG 302

Query: 608 CGD-LSMYFSRGKGVQFPFAVTDRVVIKGNKRTPLRFVGREAVVTTQCLNGWYVVKTLDN 432
            GD  +M   RG+GVQFPFAVTDRV+IKGNKRTP RFVGREAVVTTQCLNGWYVVKTLDN
Sbjct: 303 FGDSTAMDAPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTLDN 362

Query: 431 AESVKLQYRSLAKV-XXXXXXXXXXXXTPNWL 339
           AESVKLQYRSLAKV              PNWL
Sbjct: 363 AESVKLQYRSLAKVSDAPSGKALSSKIPPNWL 394


>ref|XP_002325928.1| predicted protein [Populus trichocarpa] gi|222862803|gb|EEF00310.1|
           predicted protein [Populus trichocarpa]
          Length = 226

 Score =  209 bits (532), Expect = 5e-52
 Identities = 107/152 (70%), Positives = 121/152 (79%), Gaps = 2/152 (1%)
 Frame = -2

Query: 788 LQHVFKMKVCYTCQQSVTEDSVAPNLSLRSAILAFRREEELSSCRASKKRRERFEQDKSS 609
           +QHV +MKVCY+C QS++EDS+APNLSLR A+ AF+REEEL   R+SK+RRERF+QDK  
Sbjct: 75  MQHVIRMKVCYSCSQSISEDSIAPNLSLRYAVQAFQREEELQFYRSSKRRRERFDQDKGG 134

Query: 608 CGDLS-MYFSRGKGVQFPFAVTDRVVIKGNKRTPLRFVGREAVVTTQCLNGWYVVKTLDN 432
            GD   M   RG+GVQFPFAVTDRV+IKGNKRTP RFVGREAVVTTQCLNGWYVVKTLDN
Sbjct: 135 YGDSGVMDPPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTLDN 194

Query: 431 AESVKLQYRSLAKV-XXXXXXXXXXXXTPNWL 339
           AESVKLQYRSLAK+              PNWL
Sbjct: 195 AESVKLQYRSLAKLSDDPSSKTISTKIAPNWL 226


>emb|CBI25354.3| unnamed protein product [Vitis vinifera]
          Length = 384

 Score =  204 bits (520), Expect = 1e-50
 Identities = 108/152 (71%), Positives = 119/152 (78%), Gaps = 2/152 (1%)
 Frame = -2

Query: 788 LQHVFKMKVCYTCQQSVTEDSVAPNLSLRSAILAFRREEELSSCRASKKRRERFEQDKSS 609
           +QHV KMK C TC Q  +EDSV PNLSLR+A+ AFRREEEL   R SK+RRER +QDK S
Sbjct: 233 MQHVIKMKACSTCSQPFSEDSVQPNLSLRAAVQAFRREEELQVYRTSKRRRERSDQDKCS 292

Query: 608 CGDLSMYFS-RGKGVQFPFAVTDRVVIKGNKRTPLRFVGREAVVTTQCLNGWYVVKTLDN 432
            GD ++  + RG+GVQFPFAVTDRV+IKGNKRTP RFVGREAVVTTQCLNGWYVVKTLDN
Sbjct: 293 YGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTLDN 352

Query: 431 AESVKLQYRSLAKV-XXXXXXXXXXXXTPNWL 339
           AESVKLQYRSLAKV             TPNWL
Sbjct: 353 AESVKLQYRSLAKVPDNPSSKPMLSKMTPNWL 384


>ref|XP_002275253.1| PREDICTED: U-box domain-containing protein 62-like [Vitis vinifera]
          Length = 441

 Score =  204 bits (520), Expect = 1e-50
 Identities = 108/152 (71%), Positives = 119/152 (78%), Gaps = 2/152 (1%)
 Frame = -2

Query: 788 LQHVFKMKVCYTCQQSVTEDSVAPNLSLRSAILAFRREEELSSCRASKKRRERFEQDKSS 609
           +QHV KMK C TC Q  +EDSV PNLSLR+A+ AFRREEEL   R SK+RRER +QDK S
Sbjct: 290 MQHVIKMKACSTCSQPFSEDSVQPNLSLRAAVQAFRREEELQVYRTSKRRRERSDQDKCS 349

Query: 608 CGDLSMYFS-RGKGVQFPFAVTDRVVIKGNKRTPLRFVGREAVVTTQCLNGWYVVKTLDN 432
            GD ++  + RG+GVQFPFAVTDRV+IKGNKRTP RFVGREAVVTTQCLNGWYVVKTLDN
Sbjct: 350 YGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTLDN 409

Query: 431 AESVKLQYRSLAKV-XXXXXXXXXXXXTPNWL 339
           AESVKLQYRSLAKV             TPNWL
Sbjct: 410 AESVKLQYRSLAKVPDNPSSKPMLSKMTPNWL 441


>ref|XP_004169317.1| PREDICTED: U-box domain-containing protein 62-like [Cucumis
           sativus]
          Length = 380

 Score =  204 bits (519), Expect = 2e-50
 Identities = 105/152 (69%), Positives = 120/152 (78%), Gaps = 2/152 (1%)
 Frame = -2

Query: 788 LQHVFKMKVCYTCQQSVTEDSVAPNLSLRSAILAFRREEELSSCRASKKRRERFEQDKSS 609
           +QHV ++K CY+C QSV+EDS+A NLSL++A+ AFRREEEL    + K+RRERFEQ+K  
Sbjct: 229 IQHVLRLKSCYSCSQSVSEDSIAQNLSLQAAVQAFRREEELLFYHSPKRRRERFEQEKGG 288

Query: 608 CGDLS-MYFSRGKGVQFPFAVTDRVVIKGNKRTPLRFVGREAVVTTQCLNGWYVVKTLDN 432
            GDL+ M   RG+GVQFPFAVTDRV+IKGNKRTP RFVGREAVVTTQCLNGWYVVKTLDN
Sbjct: 289 YGDLTLMDTQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTLDN 348

Query: 431 AESVKLQYRSLAKV-XXXXXXXXXXXXTPNWL 339
           AESVKLQYRSLAKV              PNWL
Sbjct: 349 AESVKLQYRSLAKVQNDATSKMITRKMMPNWL 380


Top