BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017216
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV41134.1| D2/4-type cyclin [Populus x canadensis]                 75   4e-12
ref|XP_002306546.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
emb|CAN88855.1| D2/4-type cyclin [Populus trichocarpa]                 75   6e-12
ref|XP_002514014.1| cyclin d, putative [Ricinus communis] gi|223...    75   7e-12
ref|XP_003634482.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-D4-2-...    74   1e-11

>gb|AEV41134.1| D2/4-type cyclin [Populus x canadensis]
          Length = 353

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 33/61 (54%), Positives = 43/61 (70%)
 Frame = +1

Query: 46  LHSDECVGLMVEKKSEHMPRHDYLARLKXXXXXXXXRMEAVEWISKVHSHYSFGPLSVYL 225
           + SDEC+ LMVEK+ +H+P  DYL RL+        R EAV+WI+KVH+H+ FGPL  YL
Sbjct: 60  MQSDECLVLMVEKECQHLPNGDYLKRLRNGDLDMGARKEAVDWIAKVHAHFGFGPLCAYL 119

Query: 226 S 228
           S
Sbjct: 120 S 120


>ref|XP_002306546.1| predicted protein [Populus trichocarpa] gi|222855995|gb|EEE93542.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 36/71 (50%), Positives = 49/71 (69%)
 Frame = +1

Query: 16  NQNSSLFLFSLHSDECVGLMVEKKSEHMPRHDYLARLKXXXXXXXXRMEAVEWISKVHSH 195
           NQNS  +L  + S+EC+ LMVEK+ +H+P  DYL RL+        R EAV+WI+KV++H
Sbjct: 48  NQNSGWWL-PMQSEECLVLMVEKECQHLPSGDYLKRLRNGDLGLGARKEAVDWIAKVNAH 106

Query: 196 YSFGPLSVYLS 228
           + FGPL  YLS
Sbjct: 107 FGFGPLCAYLS 117


>emb|CAN88855.1| D2/4-type cyclin [Populus trichocarpa]
          Length = 319

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 36/71 (50%), Positives = 49/71 (69%)
 Frame = +1

Query: 16  NQNSSLFLFSLHSDECVGLMVEKKSEHMPRHDYLARLKXXXXXXXXRMEAVEWISKVHSH 195
           NQNS  +L  + S+EC+ LMVEK+ +H+P  DYL RL+        R EAV+WI+KV++H
Sbjct: 48  NQNSGWWL-PMQSEECLVLMVEKECQHLPSGDYLKRLRNGDLGLGARKEAVDWIAKVNAH 106

Query: 196 YSFGPLSVYLS 228
           + FGPL  YLS
Sbjct: 107 FGFGPLCAYLS 117


>ref|XP_002514014.1| cyclin d, putative [Ricinus communis] gi|223547100|gb|EEF48597.1|
           cyclin d, putative [Ricinus communis]
          Length = 354

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 32/59 (54%), Positives = 42/59 (71%)
 Frame = +1

Query: 52  SDECVGLMVEKKSEHMPRHDYLARLKXXXXXXXXRMEAVEWISKVHSHYSFGPLSVYLS 228
           S+EC+ LMVEK+ +H+P  DYL RL+        R EA++WI KVH+H+ FGPLS YLS
Sbjct: 65  SEECLRLMVEKECQHLPNADYLKRLRRGELDLGARKEAIDWIGKVHAHFGFGPLSAYLS 123


>ref|XP_003634482.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-D4-2-like [Vitis vinifera]
          Length = 325

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 32/74 (43%), Positives = 46/74 (62%)
 Frame = +1

Query: 7   QNFNQNSSLFLFSLHSDECVGLMVEKKSEHMPRHDYLARLKXXXXXXXXRMEAVEWISKV 186
           ++FN    L    + SDEC+ LM+EK+S+H+P  DYL RL+        R + V WI+K 
Sbjct: 50  KSFNGGEFLIGLPVQSDECLALMIEKESQHLPAADYLMRLRSGDLDIGSRQDVVGWIAKA 109

Query: 187 HSHYSFGPLSVYLS 228
           H+H+ FGPL  YL+
Sbjct: 110 HAHFGFGPLCAYLA 123