BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017207
         (3017 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a...  1071   0.0  
emb|CBI20740.3| unnamed protein product [Vitis vinifera]             1069   0.0  
gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium h...   987   0.0  
ref|XP_002324204.1| dicer-like protein [Populus trichocarpa] gi|...   984   0.0  
ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis...   971   0.0  

>ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
          Length = 1648

 Score = 1071 bits (2769), Expect = 0.0
 Identities = 573/970 (59%), Positives = 697/970 (71%), Gaps = 19/970 (1%)
 Frame = -2

Query: 3016 TTARALCGSWGDITDGISLHAYRIDFSCSLADEFYSGFVLLIEANLDDEVAHAEIELFLT 2837
            T   AL G+WGD  DG    AY+IDFSC++ +E YSGFVLLIE+ LDD+V + E+EL+L 
Sbjct: 701  TQTCALSGTWGDKIDGAIFQAYKIDFSCNIVNELYSGFVLLIESKLDDDVGNIEMELYLI 760

Query: 2836 DKFVKSSVSPCGQLHLNADQVKYAQLFQEFLFNGIFGKLFIGSRSSGTPREFLLMKENKX 2657
             KFV++SVS CGQ+ L+A+QV  A  F E  FN +FG+LFIGS+SSG  REFLL  + K 
Sbjct: 761  SKFVRTSVSSCGQVSLDAEQVMKAMRFHELFFNSLFGRLFIGSKSSGVRREFLLNTQQKS 820

Query: 2656 XXXXXXXXXXLPVES-HIPIRDSLEINWRGINACSSAIEFVKEHYSAVEHLPTRAHD--- 2489
                      LP+ES +IP  +S  INW GIN+C+S +EF+++       L T   +   
Sbjct: 821  LWSSSNMYLLLPIESSNIPSDESWRINWPGINSCASVVEFLEKR----SQLSTGNMNDDT 876

Query: 2488 -----------EAECKNSKFIFLANTSVLAQNLPEMVVLAIHTGRIYSVLEVMNEKSAES 2342
                       E ECK+   + LAN SV   NL  MVVLAIHTGRIYS+L+V+ + SAES
Sbjct: 877  GNPSPCSTGLVETECKSISTVHLANNSVHVNNLKNMVVLAIHTGRIYSILDVVIDTSAES 936

Query: 2341 SFDGEFDAGPSTYSSFREYFDKKYGIVLRYPGQPLLRLKQSHKAHNLLARPRNEVSKNEG 2162
             FDG  D   S Y++F EYF+ KYGIVL YPGQPLL LKQSH AHNLL    +E +   G
Sbjct: 937  PFDGSADVNSSNYTTFAEYFNNKYGIVLMYPGQPLLLLKQSHNAHNLLVNFNDEDALQTG 996

Query: 2161 G-MATEKTLAFVHMPAELLVSIDVSIGVIKSFYLLPSLMHRLESLMLAIQLREEISCGLN 1985
              M  EK    VHMP ELLVSI+V I V+KS YLLPSL+HRLESLMLA QLREEI+    
Sbjct: 997  QKMLNEKAQTHVHMPPELLVSIEVPITVLKSSYLLPSLIHRLESLMLASQLREEIAFTTG 1056

Query: 1984 NCHISSSLILEALTSLRCCEDFSLERLELLGDSVLKYVVSCTLYLKYPKKHEGQLSALRS 1805
            +  ISSSLILEA+T+LRC E FS+ERLELLGDSVLKY VSC L+LKYPKKHEGQLSA RS
Sbjct: 1057 S-QISSSLILEAITTLRCSESFSMERLELLGDSVLKYAVSCHLFLKYPKKHEGQLSARRS 1115

Query: 1804 FAVCNSTLYKLGTNRKLQGYIRDSAFEPRRWVPPGQRSIFPIPCNCGVDTSDVPLESQFV 1625
            + VCNSTL+KLGT+R LQGYIRD AF+PRRWV PGQRSI P+PC+CGVD  +VPL+ +F 
Sbjct: 1116 WVVCNSTLHKLGTDRSLQGYIRDGAFDPRRWVAPGQRSIRPVPCSCGVDALEVPLDGKFQ 1175

Query: 1624 TEDPKTVVGKACDRGHRWMCSKTISDCVEXXXXXXXXXXXXXXXXVIMKWLGINAEFDLT 1445
            TED K VVGK+CDRGHRWM SKTI+DCVE                 +MKW GI+ E + +
Sbjct: 1176 TEDTKIVVGKSCDRGHRWMGSKTIADCVEALIGAYYVGGGLNAALHLMKWFGIDVELEPS 1235

Query: 1444 LIDKAISNAPLWHHTPESNVLNVLESKLNYCFTTKGLLLEAITHASQQEQGLSYCYQRLE 1265
            L+D+AI+ A L  + P++N + +LESK+ Y F+ KGLLLEAITHA++QE G+ YCYQRLE
Sbjct: 1236 LVDEAIATASLRTYIPKANEIEILESKIGYEFSVKGLLLEAITHATEQELGVGYCYQRLE 1295

Query: 1264 FLGDSVLDLLITWYLFQSHTDIDPGELTDLRSASVNNESFAKASVKHALQQHLQHCSGLL 1085
            FLGDSVLD+LITW+L+QSH DIDPGELTDLRSASVNNESFA+ +V+  LQQHLQHCSGLL
Sbjct: 1296 FLGDSVLDVLITWHLYQSHRDIDPGELTDLRSASVNNESFAQVAVRRNLQQHLQHCSGLL 1355

Query: 1084 LEQITEYVKFVLDGHDHP-LLQRVKCPKALGDLVESIAGAVLIDSRFNLDEVWRIFEPLL 908
            L QI EY K++    D P  LQ  K PKALGDLVESIAGA+LID++ NL+EVWRIF+PLL
Sbjct: 1356 LGQIKEYAKYLSGSDDVPNPLQSTKGPKALGDLVESIAGAILIDTKLNLNEVWRIFKPLL 1415

Query: 907  SPIVTPEKLELPPFRELNELCSHLGYFIRETSTIEEEIVHIELWLQLKDVLLKGEGRDKS 728
            SPIVTP+KLELPP RELNELC  LGYFI+E  T + E+VH EL LQ+ DVLL GEG  ++
Sbjct: 1416 SPIVTPDKLELPPLRELNELCDSLGYFIKEKCTNKGELVHAELRLQMIDVLLVGEGCGRN 1475

Query: 727  KKAAKGQAAFQLLKDLEIRGISHFRHVS--RKKNHEMVFDDSYIQDMDISIWRQSSGKDL 554
            KKAAKGQAA QLLK+LE RGIS+ R  S  RK+  ++V   S      +++   + G+  
Sbjct: 1476 KKAAKGQAAAQLLKNLEKRGISYSRSNSKRRKQGADLVGVSS-----SLNMGGDACGQSN 1530

Query: 553  NEPSSKKKKAXXXXXXXXXXXXTAPVVVTINKKKGGPRTSLYALCKKQQWPMPTFDSTQQ 374
            NE SS+                   V+ +IN KKGGPR+SLY LCK+ QWPMP+F+S +Q
Sbjct: 1531 NEDSSEN------------YDFVFAVIKSINMKKGGPRSSLYELCKRLQWPMPSFESKEQ 1578

Query: 373  QSRSPVEFGSGSERRIGFNIFVSKITLHIPNFGAIELTGEQRADKKSSQDSAALILLYEL 194
            +SR P+ FG GSERR GFN F+S I+LHIPN G +E  G+ RADKKSS DSAAL++L+EL
Sbjct: 1579 RSRFPIIFGEGSERREGFNSFISSISLHIPNCGVMECRGDHRADKKSSLDSAALVMLHEL 1638

Query: 193  GRRGKCSIED 164
             RRGK  I D
Sbjct: 1639 QRRGKLIIHD 1648


>emb|CBI20740.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score = 1069 bits (2764), Expect = 0.0
 Identities = 577/990 (58%), Positives = 701/990 (70%), Gaps = 39/990 (3%)
 Frame = -2

Query: 3016 TTARALCGSWGDITDGISLHAYRIDFSCSLADEFYSGFVLLIEANLDDEVAHAEIELFLT 2837
            T   AL G+WGD  DG    AY+IDFSC++ +E YSGFVLLIE+ LDD+V + E+EL+L 
Sbjct: 709  TQTCALSGTWGDKIDGAIFQAYKIDFSCNIVNELYSGFVLLIESKLDDDVGNIEMELYLI 768

Query: 2836 DKFVKSSVSPCGQLHLNADQVKYAQLFQEFLFNGIFGKLFIGSRSSGTPREFLLMKENKX 2657
             KFV++SVS CGQ+ L+A+QV  A  F E  FN +FG+LFIGS+SSG  REFLL  + K 
Sbjct: 769  SKFVRTSVSSCGQVSLDAEQVMKAMRFHELFFNSLFGRLFIGSKSSGVRREFLLNTQQKS 828

Query: 2656 XXXXXXXXXXLPVES-HIPIRDSLEINWRGINACSSAIEFVKEHYSAVEHLPTRAHD--- 2489
                      LP+ES +IP  +S  INW GIN+C+S +EF+++       L T   +   
Sbjct: 829  LWSSSNMYLLLPIESSNIPSDESWRINWPGINSCASVVEFLEKR----SQLSTGNMNDDT 884

Query: 2488 -----------EAECKNSKFIFLANTSVLAQNLPEMVVLAIHTGRIYSVLEVMNEKSAES 2342
                       E ECK+   + LAN SV   NL  MVVLAIHTGRIYS+L+V+ + SAES
Sbjct: 885  GNPSPCSTGLVETECKSISTVHLANNSVHVNNLKNMVVLAIHTGRIYSILDVVIDTSAES 944

Query: 2341 SFDGEFDAGPSTYSSFREYFDKKYGIVLRYPGQPLLRLKQSHKAHNLLARPRNE---VSK 2171
             FDG  D   S Y++F EYF+ KYGIVL YPGQPLL LKQSH AHNLL    +E     +
Sbjct: 945  PFDGSADVNSSNYTTFAEYFNNKYGIVLMYPGQPLLLLKQSHNAHNLLVNFNDEGGEALQ 1004

Query: 2170 NEGGMATEKTLAFVHMPAELLVSIDVSIGVIKSFYLLPSLMHRLESLMLAIQLREEISCG 1991
                M  EK    VHMP ELLVSI+V I V+KS YLLPSL+HRLESLMLA QLREEI+  
Sbjct: 1005 TGQKMLNEKAQTHVHMPPELLVSIEVPITVLKSSYLLPSLIHRLESLMLASQLREEIAFT 1064

Query: 1990 LNNCHISSSLILEALTSLRCCEDFSLERLELLGDSVLKYVVSCTLYLKYPKKHEGQLSAL 1811
              +  ISSSLILEA+T+LRC E FS+ERLELLGDSVLKY VSC L+LKYPKKHEGQLSA 
Sbjct: 1065 TGS-QISSSLILEAITTLRCSESFSMERLELLGDSVLKYAVSCHLFLKYPKKHEGQLSAR 1123

Query: 1810 RSFAVCNSTLYKLGTNRKLQGYIRDSAFEPRRWVPPGQRSIFPIPCNCGVDTSDVPLESQ 1631
            RS+ VCNSTL+KLGT+R LQGYIRD AF+PRRWV PGQRSI P+PC+CGVD  +VPL+ +
Sbjct: 1124 RSWVVCNSTLHKLGTDRSLQGYIRDGAFDPRRWVAPGQRSIRPVPCSCGVDALEVPLDGK 1183

Query: 1630 FVTEDPKTVVGKACDRGHRWMCSKTISDCVEXXXXXXXXXXXXXXXXVIMKWLGINAEFD 1451
            F TED K VVGK+CDRGHRWM SKTI+DCVE                 +MKW GI+ E +
Sbjct: 1184 FQTEDTKIVVGKSCDRGHRWMGSKTIADCVEALIGAYYVGGGLNAALHLMKWFGIDVELE 1243

Query: 1450 LTLIDKAISNAPLWHHTPESNVLNVLESKLNYCFTTKGLLLEAITHASQQEQGLSYCYQR 1271
             +L+D+AI+ A L  + P++N + +LESK+ Y F+ KGLLLEAITHA++QE G+ YCYQR
Sbjct: 1244 PSLVDEAIATASLRTYIPKANEIEILESKIGYEFSVKGLLLEAITHATEQELGVGYCYQR 1303

Query: 1270 LEFLGDSVLDLLITWYLFQSHTDIDPGELTDLRSASVNNESFAKASVKHALQQHLQHCSG 1091
            LEFLGDSVLD+LITW+L+QSH DIDPGELTDLRSASVNNESFA+ +V+  LQQHLQHCSG
Sbjct: 1304 LEFLGDSVLDVLITWHLYQSHRDIDPGELTDLRSASVNNESFAQVAVRRNLQQHLQHCSG 1363

Query: 1090 LLLEQITEYVKFVLDGHDHP-LLQRVKCPKALGDLVESIAGAVLIDSRFNLDEVWRIFEP 914
            LLL QI EY K++    D P  LQ  K PKALGDLVESIAGA+LID++ NL+EVWRIF+P
Sbjct: 1364 LLLGQIKEYAKYLSGSDDVPNPLQSTKGPKALGDLVESIAGAILIDTKLNLNEVWRIFKP 1423

Query: 913  LLSPIVTPEKLELPPFRELNELCSHLGYFIRETSTIEEEIVHIELWLQLKDVLLKGEGRD 734
            LLSPIVTP+KLELPP RELNELC  LGYFI+E  T + E+VH EL LQ+ DVLL GEG  
Sbjct: 1424 LLSPIVTPDKLELPPLRELNELCDSLGYFIKEKCTNKGELVHAELRLQMIDVLLVGEGCG 1483

Query: 733  KSKKAAKGQAAFQLLKDLEIRGISHFRHVS--RKKNHEMVFDDSYIQDMDISIWRQSSGK 560
            ++KKAAKGQAA QLLK+LE RGIS+ R  S  RK+  ++V   S      +++   + G+
Sbjct: 1484 RNKKAAKGQAAAQLLKNLEKRGISYSRSNSKRRKQGADLVGVSS-----SLNMGGDACGQ 1538

Query: 559  DLNEPSS------KKKK------------AXXXXXXXXXXXXTAPVVVTINKKKGGPRTS 434
              NE SS      KK+K            A              PV+ +IN KKGGPR+S
Sbjct: 1539 SNNEDSSELIKFHKKQKTTGMQLCTRTSIANNCLENACKPKLDTPVIKSINMKKGGPRSS 1598

Query: 433  LYALCKKQQWPMPTFDSTQQQSRSPVEFGSGSERRIGFNIFVSKITLHIPNFGAIELTGE 254
            LY LCK+ QWPMP+F+S +Q+SR P+ FG GSERR GFN F+S I+LHIPN G +E  G+
Sbjct: 1599 LYELCKRLQWPMPSFESKEQRSRFPIIFGEGSERREGFNSFISSISLHIPNCGVMECRGD 1658

Query: 253  QRADKKSSQDSAALILLYELGRRGKCSIED 164
             RADKKSS DSAAL++L+EL RRGK  I D
Sbjct: 1659 HRADKKSSLDSAALVMLHELQRRGKLIIHD 1688


>gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium hirsutum]
          Length = 1655

 Score =  987 bits (2552), Expect = 0.0
 Identities = 526/967 (54%), Positives = 664/967 (68%), Gaps = 16/967 (1%)
 Frame = -2

Query: 3016 TTARALCGSWGDITDGISLHAYRIDFSCSLADEFYSGFVLLIEANLDDEVAHAEIELFLT 2837
            T  +ALCGSWG+ +D     AY+ DF C++    YSGFVLLIE+ L D+V + E++LFL 
Sbjct: 706  TCIQALCGSWGEKSDDAVFFAYKFDFKCNIITVVYSGFVLLIESKLADDVGNTEMDLFLI 765

Query: 2836 DKFVKSSVSPCGQLHLNADQVKYAQLFQEFLFNGIFGKLFIGSRSSGTPREFLLMKENKX 2657
             K VK+SVS CGQ+ LNA+Q+  A+ FQEF FNG+FGKLF+GS+SSG PREFLL  +   
Sbjct: 766  GKMVKASVSSCGQVRLNAEQMMKAKRFQEFFFNGLFGKLFVGSKSSGAPREFLLRDKTSS 825

Query: 2656 XXXXXXXXXXLPVESHIPIRDSLEINWRGINACSSAIEFVKEHY----------SAVEHL 2507
                      LP+E +    D L I+W GI AC+ A EF+ ++            +   L
Sbjct: 826  LWSPSRMYLLLPLEDNST--DELRIHWPGITACTLAAEFLNKNSLLGTEQSDDGGSNPSL 883

Query: 2506 PTRAHDEAECKNSKFIFLANTSVLAQNLPEMVVLAIHTGRIYSVLEVMNEKSAESSFDGE 2327
             +      +CK +  I  AN+SV A +L   VVLAIHTGRIY ++E +++K+AESSF   
Sbjct: 884  NSTGSPVTDCKETNIIRFANSSVDANSLRNTVVLAIHTGRIYCIIEAVSDKTAESSFAET 943

Query: 2326 FDAGPSTYSSFREYFDKKYGIVLRYPGQPLLRLKQSHKAHNLLARPRNE---VSKNEGGM 2156
             D   S +++F EYF KKY IVL++PGQPL+ LKQSH  HNLL    +E      ++ G+
Sbjct: 944  VDTVSSEFANFYEYFYKKYNIVLKHPGQPLMLLKQSHNPHNLLVNFNDEGVSAKASQAGV 1003

Query: 2155 ATEKTLAFVHMPAELLVSIDVSIGVIKSFYLLPSLMHRLESLMLAIQLREEISCGLNNCH 1976
              EK    VHMP ELL+ +DV + V+KS YLLPSLMHRLESLMLA QLREEI+   +N  
Sbjct: 1004 VNEKPRFHVHMPPELLLVLDVPVSVLKSLYLLPSLMHRLESLMLANQLREEINFCSSNID 1063

Query: 1975 ISSSLILEALTSLRCCEDFSLERLELLGDSVLKYVVSCTLYLKYPKKHEGQLSALRSFAV 1796
            I SS+ILEALT+LRCCE FS+ERLELLGDSVLKY VSC L+L+YP KHEGQLSA RS AV
Sbjct: 1064 IPSSMILEALTTLRCCESFSMERLELLGDSVLKYAVSCHLFLRYPNKHEGQLSARRSLAV 1123

Query: 1795 CNSTLYKLGTNRKLQGYIRDSAFEPRRWVPPGQRSIFPIPCNCGVDTSDVPLESQFVTED 1616
            CNSTL+KLGT+ K+QGYIRDSAF+PRRWV PGQR + P+PC CGVD+ +VPL+ +F TED
Sbjct: 1124 CNSTLHKLGTDHKIQGYIRDSAFDPRRWVAPGQRVLRPVPCKCGVDSLEVPLDKKFQTED 1183

Query: 1615 PKTVVGKACDRGHRWMCSKTISDCVEXXXXXXXXXXXXXXXXVIMKWLGINAEFDLTLID 1436
            PK  VGK+CDRGHRW+CSKTISDCVE                 +MKWLGI+AE D  ++ 
Sbjct: 1184 PKVKVGKSCDRGHRWLCSKTISDCVEALIGAYYLSGGLVAALHVMKWLGIDAELDPLVVA 1243

Query: 1435 KAISNAPLWHHTPESNVLNVLESKLNYCFTTKGLLLEAITHASQQEQGLSYCYQRLEFLG 1256
            + I+ A L  + P   + +++ESK+ Y F+ K  L EA+TH S  E   SYCYQRLEFLG
Sbjct: 1244 EVINQASLRTYVPNYEI-HMIESKVGYNFSVKFFLQEALTHESLHE---SYCYQRLEFLG 1299

Query: 1255 DSVLDLLITWYLFQSHTDIDPGELTDLRSASVNNESFAKASVKHALQQHLQHCSGLLLEQ 1076
            DSVLDLLIT YL+  HT+IDPGELTDLRSASVNNE+FA+ +V+H L +HLQHCS LL  Q
Sbjct: 1300 DSVLDLLITQYLYNHHTNIDPGELTDLRSASVNNENFAQVAVRHDLHKHLQHCSTLLSNQ 1359

Query: 1075 ITEYVK-FVLDGHDHPLLQRVKCPKALGDLVESIAGAVLIDSRFNLDEVWRIFEPLLSPI 899
            I+EYV+ F    +   L   +K PKALGDLVESI GA+LID+  NLD+VWRI EPLLSPI
Sbjct: 1360 ISEYVQSFTESDNTTRLDPSIKGPKALGDLVESIVGAILIDTNLNLDKVWRIVEPLLSPI 1419

Query: 898  VTPEKLELPPFRELNELCSHLGYFIRETSTIEEEIVHIELWLQLKDVLLKGEGRDKSKKA 719
            VTP+KLELPPFRELNELC  LGYFI+E    + E+VH EL LQL   LL GEG D+S+K 
Sbjct: 1420 VTPDKLELPPFRELNELCDSLGYFIKEKCKNKGEVVHAELLLQLDHDLLVGEGFDRSRKV 1479

Query: 718  AKGQAAFQLLKDLEIRGISHFRHVSRKKNHEMVFDDSYIQD--MDISIWRQSSGKDLNEP 545
            AKG+AA  LLKDLE RGIS      +K+ H+ V     ++D  ++ +I ++    ++   
Sbjct: 1480 AKGKAASCLLKDLENRGISR-----KKRKHDCVDSSQTMEDDSLEPTIPKRQRRAEIQLL 1534

Query: 544  SSKKKKAXXXXXXXXXXXXTAPVVVTINKKKGGPRTSLYALCKKQQWPMPTFDSTQQQSR 365
               KK                PV+VT+  KKGGPRT+L+ LCKK  WPMP+  +T+ +S 
Sbjct: 1535 DESKKAC--------SATPATPVIVTVKTKKGGPRTTLFELCKKLLWPMPSIKATEHKSS 1586

Query: 364  SPVEFGSGSERRIGFNIFVSKITLHIPNFGAIELTGEQRADKKSSQDSAALILLYELGRR 185
            +P+E G G ER+ GF  FVSKI L++P +  IE TG+ +ADKKSS DSAAL +LYEL +R
Sbjct: 1587 APMEIGEGPERKKGFISFVSKIILNVPGYDIIECTGDAKADKKSSSDSAALFMLYELEQR 1646

Query: 184  GKCSIED 164
            GK  IE+
Sbjct: 1647 GKLIIEE 1653


>ref|XP_002324204.1| dicer-like protein [Populus trichocarpa] gi|222865638|gb|EEF02769.1|
            dicer-like protein [Populus trichocarpa]
          Length = 1492

 Score =  984 bits (2543), Expect = 0.0
 Identities = 522/960 (54%), Positives = 655/960 (68%), Gaps = 13/960 (1%)
 Frame = -2

Query: 3004 ALCGSWGDITDGISLHAYRIDFSCSLADEFYSGFVLLIEANLDDEVAHAEIELFLTDKFV 2825
            AL GSWG+  DG + HAY+ DFSCS+  + YSGF+LLIE+ LDD+V + E++L+L  K V
Sbjct: 573  ALSGSWGEKLDGATFHAYKFDFSCSIVSQIYSGFILLIESKLDDDVGNIELDLYLVAKIV 632

Query: 2824 KSSVSPCGQLHLNADQVKYAQLFQEFLFNGIFGKLFIGSRSSGTPREFLLMKENKXXXXX 2645
            KSS+S CG +HL+A Q+  A+ FQEF FNG+FGKLF GS+SS   REFLL KE       
Sbjct: 633  KSSISSCGVVHLDAAQMTKAKRFQEFFFNGLFGKLFTGSKSS---REFLLQKETTLLWSP 689

Query: 2644 XXXXXXLPVES-HIPIRDSLEINWRGINACSSAIEFVKEHYSAVEH-------LPTRAHD 2489
                  LP+E   I   D  +I+W+GI ACSS +E++K  + A          LP     
Sbjct: 690  SNMYLLLPLEPWSISSNDWCKIDWKGIEACSSVVEYLKNSFLAARSYSGGGNPLPDNVQS 749

Query: 2488 EA-ECKNSKFIFLANTSVLAQNLPEMVVLAIHTGRIYSVLEVMNEKSAESSFDGEFDAGP 2312
               EC  +  I  AN  V  +N+ +MVVLAIHTGRIYS+++V+N+ SAES+F+G  D   
Sbjct: 750  STIECNGTNLIHFANALVNVENIKDMVVLAIHTGRIYSIVKVVNDSSAESAFEGNAD-NV 808

Query: 2311 STYSSFREYFDKKYGIVLRYPGQPLLRLKQSHKAHNLLARPRNE---VSKNEGGMATEKT 2141
            + +S++ EYF+K+YGIVL +PGQPLLRLKQSH  HN L    +E   V  ++ GM   K 
Sbjct: 809  TEFSTYTEYFNKRYGIVLMHPGQPLLRLKQSHNPHNHLVNFNDEGLLVCDSKDGMVGRKQ 868

Query: 2140 LAFVHMPAELLVSIDVSIGVIKSFYLLPSLMHRLESLMLAIQLREEISCGLNNCHISSSL 1961
               VHMP ELL+ IDV I V+KS YL+PSLMHRLE LMLA QLR+EI C   N +I SSL
Sbjct: 869  QQHVHMPPELLIKIDVPISVVKSIYLMPSLMHRLECLMLASQLRQEIDCHAPNFYIPSSL 928

Query: 1960 ILEALTSLRCCEDFSLERLELLGDSVLKYVVSCTLYLKYPKKHEGQLSALRSFAVCNSTL 1781
            ILEA+T+LRCCE FS+ERLELLGDSVLKY VSC L+LKYP KHEGQLS+ RS AVCNSTL
Sbjct: 929  ILEAITTLRCCESFSMERLELLGDSVLKYAVSCHLFLKYPNKHEGQLSSWRSGAVCNSTL 988

Query: 1780 YKLGTNRKLQGYIRDSAFEPRRWVPPGQRSI-FPIPCNCGVDTSDVPLESQFVTEDPKTV 1604
            +KLGT+ K+QGYI DSAF+PRRW  PGQ+S+  P PC CGVDT +VPL+ +F TE     
Sbjct: 989  HKLGTDCKVQGYILDSAFDPRRWAAPGQKSVRTPAPCKCGVDTLEVPLDRKFQTESAIVK 1048

Query: 1603 VGKACDRGHRWMCSKTISDCVEXXXXXXXXXXXXXXXXVIMKWLGINAEFDLTLIDKAIS 1424
            VGK CD GHRWM SKTISDCVE                 +MKW GINAE D +LI +AI+
Sbjct: 1049 VGKPCDSGHRWMGSKTISDCVESVIGAYYVSGGLIAAIHVMKWFGINAELDPSLISEAIT 1108

Query: 1423 NAPLWHHTPESNVLNVLESKLNYCFTTKGLLLEAITHASQQEQGLSYCYQRLEFLGDSVL 1244
            +A L  + P+ + +  LESKL Y F  K +L EA+THAS QEQG++YCYQRLEFLGDSVL
Sbjct: 1109 SASLRSYIPKEDEIKSLESKLGYTFGVKFVLQEAMTHASIQEQGVTYCYQRLEFLGDSVL 1168

Query: 1243 DLLITWYLFQSHTDIDPGELTDLRSASVNNESFAKASVKHALQQHLQHCSGLLLEQITEY 1064
            DLLITW+L+QSHTD+DPGELTDLRSASVNN++FA+ +VK  L  HL HCS LL  QITEY
Sbjct: 1169 DLLITWHLYQSHTDVDPGELTDLRSASVNNDNFAQVAVKQNLYTHLLHCSTLLQSQITEY 1228

Query: 1063 VKFVLDGHDHPLLQRVKCPKALGDLVESIAGAVLIDSRFNLDEVWRIFEPLLSPIVTPEK 884
            V        H   Q  K PKALGDL+ESIAGA+LID++FNLD VWRIF+PLLSPIVTPEK
Sbjct: 1229 VNSF-----HESDQGTKAPKALGDLIESIAGALLIDTKFNLDGVWRIFKPLLSPIVTPEK 1283

Query: 883  LELPPFRELNELCSHLGYFIRETSTIEEEIVHIELWLQLKDVLLKGEGRDKSKKAAKGQA 704
            LELPP REL ELC  +G F++E  T + E+VH +LW+QL + LL GEG +K++KAAKG+A
Sbjct: 1284 LELPPLRELVELCDSIGVFVKEKCTKKAEMVHAQLWVQLDNELLSGEGYEKNRKAAKGKA 1343

Query: 703  AFQLLKDLEIRGISHFRHVSRKKNHEMVFDDSYIQDMDISIWRQSSGKDLNEPSSKKKKA 524
            A  LLK L++    +  H         +   + ++ +  S                    
Sbjct: 1344 ASCLLKKLQVCNSGNCNHAFFCFLMNSIVPSNIVEYLAKS-------------------- 1383

Query: 523  XXXXXXXXXXXXTAPVVVTINKKKGGPRTSLYALCKKQQWPMPTFDSTQQQSRSPVEFGS 344
                           V+ +INKKKGGPRTSLY LCKK QW MPTFD+T+ +SR+ +EFG 
Sbjct: 1384 -----------PPFAVIESINKKKGGPRTSLYDLCKKVQWTMPTFDTTETKSRTAIEFGE 1432

Query: 343  GSERRIGFNIFVSKITLHIPNFGAIELTGEQRADKKSSQDSAALILLYELGRRGKCSIED 164
            G ++R GFN +VSKI ++IP++G +E  GE  ADKK+S DSAAL +L EL +RG+  I++
Sbjct: 1433 GPDKRTGFNSYVSKIIMNIPSYGVVECAGEASADKKTSYDSAALAMLNELEKRGQLIIDE 1492


>ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis]
            gi|223544646|gb|EEF46162.1| Ribonuclease III, putative
            [Ricinus communis]
          Length = 1660

 Score =  971 bits (2509), Expect = 0.0
 Identities = 516/956 (53%), Positives = 650/956 (67%), Gaps = 5/956 (0%)
 Frame = -2

Query: 3016 TTARALCGSWGDITDGISLHAYRIDFSCSLADEFYSGFVLLIEANLDDEVAHAEIELFLT 2837
            T   AL GSWG+  DG + HAY+ +FSCS+  E YSG++LLIE+ LDD+V + E++LFL 
Sbjct: 716  TPIHALSGSWGENLDGATFHAYKFEFSCSIVSEKYSGYILLIESKLDDDVGNIELDLFLV 775

Query: 2836 DKFVKSSVSPCGQLHLNADQVKYAQLFQEFLFNGIFGKLFIGSRSSGTPREFLLMKENKX 2657
             K V++SVS CGQ+HL+A+Q+  A+ F E  FN +FGKLF GS+SS +PREFLL KE   
Sbjct: 776  RKTVRASVSSCGQVHLDAEQMMKAKCFHELFFNALFGKLFSGSKSSRSPREFLLQKETSL 835

Query: 2656 XXXXXXXXXXLPVESHIPIRD-SLEINWRGINACSSAIEFVKEH-YSAVEHLPTRA--HD 2489
                      LP+E+     D S +INWRG+N CS+ +EF+K++ +   EH         
Sbjct: 836  LWILSNMYLLLPLEAFSASSDESWKINWRGVNGCSNVVEFLKKNCFLGAEHYNGERVRSS 895

Query: 2488 EAECKNSKFIFLANTSVLAQNLPEMVVLAIHTGRIYSVLEVMNEKSAESSFDGEFDAGPS 2309
              EC     +  AN SV  + + +MVVLAIHTG+IYSV+EV+ + SAES F+      PS
Sbjct: 896  VTECSGGNAVHFANISVDVERVKDMVVLAIHTGKIYSVVEVVGDASAESPFEQNVGGAPS 955

Query: 2308 TYSSFREYFDKKYGIVLRYPGQPLLRLKQSHKAHNLLARPRNEVSKNEGGMATEKTLAFV 2129
             +S+F EYF+KKYGIVL  P QPLL LKQSHK HNLL  P  +  K+  G+   K   F 
Sbjct: 956  KFSTFSEYFNKKYGIVLLRPRQPLLLLKQSHKPHNLLNPPDEDTLKD--GLVVAKQRQFA 1013

Query: 2128 HMPAELLVSIDVSIGVIKSFYLLPSLMHRLESLMLAIQLREEISCGLNNCHISSSLILEA 1949
             MP ELLVSIDV I  +KS YLLPSLM+RLESLMLA QLR+EI+C ++N HI S LILEA
Sbjct: 1014 RMPPELLVSIDVPIQTLKSSYLLPSLMYRLESLMLASQLRQEIACQVSNFHIPSLLILEA 1073

Query: 1948 LTSLRCCEDFSLERLELLGDSVLKYVVSCTLYLKYPKKHEGQLSALRSFAVCNSTLYKLG 1769
            +T+ R CE  S+ERLELLGDSVLKY VSC L+L+YP KHEGQLSA R+ AVCNSTL++LG
Sbjct: 1074 ITTPRSCEKVSMERLELLGDSVLKYSVSCDLFLRYPTKHEGQLSAQRTRAVCNSTLHQLG 1133

Query: 1768 TNRKLQGYIRDSAFEPRRWVPPGQRSIFPIPCNCGVDTSDVPLESQFVTEDPKTVVGKAC 1589
               KLQGYIRDSAF PR WV PGQ+  F + C CGVDT +VPL+++F TEDPK  +   C
Sbjct: 1134 IGCKLQGYIRDSAFIPRYWVAPGQQPAFYVSCTCGVDTLEVPLDAKFQTEDPKVQIAICC 1193

Query: 1588 DRGHRWMCSKTISDCVEXXXXXXXXXXXXXXXXVIMKWLGINAEFDLTLIDKAISNAPLW 1409
             +GHRWMCSKTISDCVE                 +M+WLG++ EFD +L+DK I  A + 
Sbjct: 1194 SKGHRWMCSKTISDCVEAVIGAYYVSGGLMAALHVMQWLGMDVEFDPSLVDKIIKTASVR 1253

Query: 1408 HHTPESNVLNVLESKLNYCFTTKGLLLEAITHASQQEQGLSYCYQRLEFLGDSVLDLLIT 1229
             +TP+ + +  +ESKL Y F+ K LL EA+THAS QEQG+ YCYQRLEFLGDSVLDLLIT
Sbjct: 1254 SYTPKEDEIKGIESKLGYTFSVKFLLQEAMTHASMQEQGIGYCYQRLEFLGDSVLDLLIT 1313

Query: 1228 WYLFQSHTDIDPGELTDLRSASVNNESFAKASVKHALQQHLQHCSGLLLEQITEYVKFVL 1049
            W+L+Q+HT +DPGELTDLRSA V+NE+FA+  V+  L +HLQHCS LLL QI EY++   
Sbjct: 1314 WHLYQNHTSMDPGELTDLRSACVSNENFAQVVVRRDLYKHLQHCSTLLLSQIKEYLESFH 1373

Query: 1048 DGHDHPLLQRVKCPKALGDLVESIAGAVLIDSRFNLDEVWRIFEPLLSPIVTPEKLELPP 869
            +  +       K PKALGDL+ESIAGA+LID++ NLDEVWRIF PLLSP+ TP+ LELPP
Sbjct: 1374 ESDEVAKATGPKGPKALGDLLESIAGAMLIDAKLNLDEVWRIFMPLLSPLATPQNLELPP 1433

Query: 868  FRELNELCSHLGYFIRETSTIEEEIVHIELWLQLKDVLLKGEGRDKSKKAAKGQAAFQLL 689
             REL +LC+ LGYFI+E      +IVH EL LQL DVLL G G D+S+KAAKG+AA  LL
Sbjct: 1434 LRELMQLCNSLGYFIKEKCINNNDIVHAELRLQLNDVLLVGNGCDRSRKAAKGKAATHLL 1493

Query: 688  KDLEIRGISH-FRHVSRKKNHEMVFDDSYIQDMDISIWRQSSGKDLNEPSSKKKKAXXXX 512
            K LE RGI++ + H  R+K      D +++ D           KD  +P   KK      
Sbjct: 1494 KKLENRGITYSWGHSKRRKQ-----DSNHVVDSSPLDITNDKAKDHKKP---KKLENQSP 1545

Query: 511  XXXXXXXXTAPVVVTINKKKGGPRTSLYALCKKQQWPMPTFDSTQQQSRSPVEFGSGSER 332
                     A ++  IN KKGGPRT L+ LCKK QW  PT+ ST+ +S +P+ F  G ER
Sbjct: 1546 AGSGGDPSFAGIIEAINMKKGGPRTDLFELCKKVQWTTPTYSSTENKSSTPILFDEGIER 1605

Query: 331  RIGFNIFVSKITLHIPNFGAIELTGEQRADKKSSQDSAALILLYELGRRGKCSIED 164
               +N FVS ITL+IP +G IE TG+ R DKKSS D+AAL +LYEL ++G   I D
Sbjct: 1606 ---YNSFVSTITLNIPFYGTIECTGDPRPDKKSSCDTAALAMLYELQKQGLLIIGD 1658