BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017201
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141864.1| PREDICTED: 50S ribosomal protein L7/L12-like...   139   4e-31
ref|XP_002271482.1| PREDICTED: 50S ribosomal protein L12, chloro...   137   1e-30
emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera]   137   1e-30
ref|XP_002328780.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
ref|XP_002868977.1| ribosomal protein L12 family protein [Arabid...   122   4e-26

>ref|XP_004141864.1| PREDICTED: 50S ribosomal protein L7/L12-like [Cucumis sativus]
           gi|449499867|ref|XP_004160938.1| PREDICTED: 50S
           ribosomal protein L7/L12-like [Cucumis sativus]
          Length = 168

 Score =  139 bits (349), Expect = 4e-31
 Identities = 75/113 (66%), Positives = 82/113 (72%), Gaps = 3/113 (2%)
 Frame = +1

Query: 217 QTQKLERIADEILDLNKLERHDYQILFGHKLGLNHYGPEISRLDXXXXXXXXXXXXXXXX 396
           +TQKLERIADE+LDL K+ERHDY ILF +K+GLN YGP +S L                 
Sbjct: 36  RTQKLERIADELLDLTKIERHDYAILFRYKMGLNKYGPAVSGLSAPGSAAAGSAAAETKE 95

Query: 397 K---AFDIKLEKFDAAVKIKIIKEVTTFTDLGFEEAKDLVEKVPVVLKKGVTK 546
                FDIKLEKFDAA KIKIIKEV TFTDLG +EAKDLVEKVPVVLKKGVTK
Sbjct: 96  AEKTVFDIKLEKFDAAAKIKIIKEVRTFTDLGLKEAKDLVEKVPVVLKKGVTK 148


>ref|XP_002271482.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Vitis
           vinifera]
          Length = 165

 Score =  137 bits (344), Expect = 1e-30
 Identities = 77/114 (67%), Positives = 81/114 (71%), Gaps = 5/114 (4%)
 Frame = +1

Query: 220 TQKLERIADEILDLNKLERHDYQILFGHKLGLNHYGPEISRLDXXXXXXXXXXXXXXXXK 399
           TQKLERIADE+LDL KLER+DY ILF  KLGLN YGP +S L                 K
Sbjct: 32  TQKLERIADELLDLTKLERYDYSILFRLKLGLNKYGPAVSGLASADSASAGSGSAPADAK 91

Query: 400 A-----FDIKLEKFDAAVKIKIIKEVTTFTDLGFEEAKDLVEKVPVVLKKGVTK 546
           A     FDIKLEKFDAA KIKIIKEV TFTDLG +EAKDLVEK PVVLKKGVTK
Sbjct: 92  AAEKTAFDIKLEKFDAAAKIKIIKEVRTFTDLGLKEAKDLVEKAPVVLKKGVTK 145


>emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera]
          Length = 615

 Score =  137 bits (344), Expect = 1e-30
 Identities = 77/114 (67%), Positives = 81/114 (71%), Gaps = 5/114 (4%)
 Frame = +1

Query: 220 TQKLERIADEILDLNKLERHDYQILFGHKLGLNHYGPEISRLDXXXXXXXXXXXXXXXXK 399
           TQKLERIADE+LDL KLER+DY ILF  KLGLN YGP +S L                 K
Sbjct: 482 TQKLERIADELLDLTKLERYDYSILFRLKLGLNKYGPAVSGLASADSASAGSGSAPADAK 541

Query: 400 A-----FDIKLEKFDAAVKIKIIKEVTTFTDLGFEEAKDLVEKVPVVLKKGVTK 546
           A     FDIKLEKFDAA KIKIIKEV TFTDLG +EAKDLVEK PVVLKKGVTK
Sbjct: 542 AAEKTAFDIKLEKFDAAAKIKIIKEVRTFTDLGLKEAKDLVEKAPVVLKKGVTK 595


>ref|XP_002328780.1| predicted protein [Populus trichocarpa] gi|222839078|gb|EEE77429.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  136 bits (342), Expect = 2e-30
 Identities = 74/117 (63%), Positives = 81/117 (69%), Gaps = 6/117 (5%)
 Frame = +1

Query: 214 TQTQKLERIADEILDLNKLERHDYQILFGHKLGLNHYGPEISRL------DXXXXXXXXX 375
           TQTQKLERIAD +LDL K+ERHDY ILF HK+GL  YGP +S                  
Sbjct: 37  TQTQKLERIADVLLDLTKIERHDYAILFRHKMGLGRYGPAVSGAILSGPAAPGSASGDVK 96

Query: 376 XXXXXXXKAFDIKLEKFDAAVKIKIIKEVTTFTDLGFEEAKDLVEKVPVVLKKGVTK 546
                   AFDIKLEKFDAA KIK+IKEV TFTDLG +EAKDLVEKVPVVLKKG+TK
Sbjct: 97  TAAAAEKTAFDIKLEKFDAAAKIKVIKEVRTFTDLGLKEAKDLVEKVPVVLKKGLTK 153


>ref|XP_002868977.1| ribosomal protein L12 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297314813|gb|EFH45236.1| ribosomal protein
           L12 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 167

 Score =  122 bits (306), Expect = 4e-26
 Identities = 59/110 (53%), Positives = 78/110 (70%)
 Frame = +1

Query: 217 QTQKLERIADEILDLNKLERHDYQILFGHKLGLNHYGPEISRLDXXXXXXXXXXXXXXXX 396
           +T+KLERIAD++L+LN++E +DY ILF HKLGLN YG  ++                   
Sbjct: 38  RTKKLERIADDLLNLNRIELYDYSILFSHKLGLNRYGSAVAVAGSDGEASGSTETKTAEK 97

Query: 397 KAFDIKLEKFDAAVKIKIIKEVTTFTDLGFEEAKDLVEKVPVVLKKGVTK 546
            AFD+KLEKF+ A KIK+IKE+  FTDLG +EAK+LVEK PV++KKG+TK
Sbjct: 98  TAFDVKLEKFETASKIKVIKEIRAFTDLGLKEAKELVEKAPVIVKKGLTK 147