BLASTX nr result

ID: Coptis25_contig00017196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017196
         (1731 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302339.1| predicted protein [Populus trichocarpa] gi|2...   218   3e-54
ref|XP_002285689.1| PREDICTED: uncharacterized protein LOC100255...   218   4e-54
emb|CAN74013.1| hypothetical protein VITISV_003550 [Vitis vinifera]   218   4e-54
ref|XP_003519199.1| PREDICTED: putative DNA-binding protein ESCA...   218   5e-54
ref|XP_003602928.1| hypothetical protein MTR_3g100470 [Medicago ...   213   1e-52

>ref|XP_002302339.1| predicted protein [Populus trichocarpa] gi|222844065|gb|EEE81612.1|
            predicted protein [Populus trichocarpa]
          Length = 274

 Score =  218 bits (556), Expect = 3e-54
 Identities = 122/253 (48%), Positives = 158/253 (62%), Gaps = 18/253 (7%)
 Frame = +2

Query: 395  ELERGSGGQEDGTIEVAKRPRGRPPGSKNKPKPPIIITRESEFCAMRPLFLELPNGLDLI 574
            +  R SGG +  TIEV +RPRGRPPGSKNKPKPP+IITRESE  +M P  LE+P G D++
Sbjct: 38   QFSRDSGGTDGATIEVVRRPRGRPPGSKNKPKPPVIITRESE-PSMSPYILEVPGGNDVV 96

Query: 575  DAIARFTHRRNIGLTVLTASGSVANVSFRQSSVNINPTSSSTVTFQGRYEILNISATFLX 754
            +A++RF  R+N+G+ VLT SG+VANV+ RQ S     T  +T+TF GR++IL+ISATFL 
Sbjct: 97   EALSRFCRRKNMGICVLTGSGTVANVTLRQPSA----TPGATITFHGRFDILSISATFLP 152

Query: 755  XXXXXXXXXXXXXXXXXXXXFMISLVGPRGQIIGGSVAGPVITAGTVFIVAGSFDNPSYH 934
                                F ISL GP+GQI+GG VAG ++ AGTVF+VA SF+NPSYH
Sbjct: 153  QTASYPVPNS----------FTISLAGPQGQIVGGIVAGSLVAAGTVFVVAASFNNPSYH 202

Query: 935  RLPIEDDVPKSVSDENLTSNEPLV------------------QSCGMTSMYRSHVPSNSS 1060
            RLP+E++   S SD       P V                  +SCG+ +MY  H+P   +
Sbjct: 203  RLPLEEEGRTSGSDGGGEGQSPAVSGAGGGESGHAASGGGGGESCGI-AMYSCHMP---N 258

Query: 1061 DLIWAPTPRPSAP 1099
            D+IWAP  RP  P
Sbjct: 259  DVIWAPAARPPPP 271


>ref|XP_002285689.1| PREDICTED: uncharacterized protein LOC100255831 [Vitis vinifera]
          Length = 309

 Score =  218 bits (555), Expect = 4e-54
 Identities = 128/265 (48%), Positives = 162/265 (61%), Gaps = 9/265 (3%)
 Frame = +2

Query: 332  TSEEE----SNGPDGCISKKPKLETELERGSGGQEDGTIEVAKRPRGRPPGSKNKPKPPI 499
            TSEE+    S G     +      T  +  SG  +  TIEV +RPRGRPPGSKNKPKPP+
Sbjct: 57   TSEEDDSRSSGGATAVAAAGATTPTPTKPKSGDGDGATIEVVRRPRGRPPGSKNKPKPPV 116

Query: 500  IITRESEFCAMRPLFLELPNGLDLIDAIARFTHRRNIGLTVLTASGSVANVSFRQSSVNI 679
            IITR++E  AM P  LE+P G+D+++AIARF+ RRNIGL VL  SG+VANV+ RQ S   
Sbjct: 117  IITRDTE-PAMSPYVLEVPGGVDIVEAIARFSRRRNIGLCVLNGSGTVANVTLRQPST-- 173

Query: 680  NPTSSSTVTFQGRYEILNISATFLXXXXXXXXXXXXXXXXXXXXXFMISLVGPRGQIIGG 859
              T  +TVTF GR++IL+ISAT +                     F ISL GP+GQI+GG
Sbjct: 174  --TPGATVTFHGRFDILSISATIIPQSASSPIPSSANG-------FTISLAGPQGQIVGG 224

Query: 860  SVAGPVITAGTVFIVAGSFDNPSYHRLPIEDDVPKSVSDENLTSNEPLVQS-----CGMT 1024
            SVAG ++ AGTV+++A SF+NPSYHRLP ED+VP S S  N   + P             
Sbjct: 225  SVAGTLLAAGTVYVIAASFNNPSYHRLPGEDEVPNSGSGGNDGQSPPTGSGDSGHPPAEM 284

Query: 1025 SMYRSHVPSNSSDLIWAPTPRPSAP 1099
            S+Y  H+P   SD+IWAPT R   P
Sbjct: 285  SIYSCHLP---SDVIWAPTARQPPP 306


>emb|CAN74013.1| hypothetical protein VITISV_003550 [Vitis vinifera]
          Length = 417

 Score =  218 bits (555), Expect = 4e-54
 Identities = 128/265 (48%), Positives = 162/265 (61%), Gaps = 9/265 (3%)
 Frame = +2

Query: 332  TSEEE----SNGPDGCISKKPKLETELERGSGGQEDGTIEVAKRPRGRPPGSKNKPKPPI 499
            TSEE+    S G     +      T  +  SG  +  TIEV +RPRGRPPGSKNKPKPP+
Sbjct: 165  TSEEDDSRSSGGATAVAAAGATTPTPTKPKSGDGDGATIEVVRRPRGRPPGSKNKPKPPV 224

Query: 500  IITRESEFCAMRPLFLELPNGLDLIDAIARFTHRRNIGLTVLTASGSVANVSFRQSSVNI 679
            IITR++E  AM P  LE+P G+D+++AIARF+ RRNIGL VL  SG+VANV+ RQ S   
Sbjct: 225  IITRDTE-PAMSPYVLEVPGGVDIVEAIARFSRRRNIGLCVLNGSGTVANVTLRQPST-- 281

Query: 680  NPTSSSTVTFQGRYEILNISATFLXXXXXXXXXXXXXXXXXXXXXFMISLVGPRGQIIGG 859
              T  +TVTF GR++IL+ISAT +                     F ISL GP+GQI+GG
Sbjct: 282  --TPGATVTFHGRFDILSISATIIPQSASSPIPSSANG-------FTISLAGPQGQIVGG 332

Query: 860  SVAGPVITAGTVFIVAGSFDNPSYHRLPIEDDVPKSVSDENLTSNEPLVQS-----CGMT 1024
            SVAG ++ AGTV+++A SF+NPSYHRLP ED+VP S S  N   + P             
Sbjct: 333  SVAGTLLAAGTVYVIAASFNNPSYHRLPGEDEVPNSGSGGNDGQSPPTGSGDSGHPPAEM 392

Query: 1025 SMYRSHVPSNSSDLIWAPTPRPSAP 1099
            S+Y  H+P   SD+IWAPT R   P
Sbjct: 393  SIYSCHLP---SDVIWAPTARQPPP 414


>ref|XP_003519199.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Glycine max]
          Length = 271

 Score =  218 bits (554), Expect = 5e-54
 Identities = 126/266 (47%), Positives = 166/266 (62%), Gaps = 13/266 (4%)
 Frame = +2

Query: 332  TSEEE----SNGPDGCISKKPKLETELERGSGGQEDG-TIEVAKRPRGRPPGSKNKPKPP 496
            TSE++    S GP+  +++K  L      G GG  DG TIEV +RPRGRPPGSKN+PKPP
Sbjct: 24   TSEDDDSRSSGGPNTAVAQKSVL------GGGGCSDGATIEVVRRPRGRPPGSKNRPKPP 77

Query: 497  IIITRESEFCAMRPLFLELPNGLDLIDAIARFTHRRNIGLTVLTASGSVANVSFRQSSVN 676
            +IITRE E  AM P  LE+P G D+++A+ARF+ R+N GL VLT SG+VANV+ RQ S +
Sbjct: 78   LIITREPE-PAMSPFILEIPGGSDVVEALARFSRRKNTGLCVLTGSGTVANVTLRQPSFS 136

Query: 677  INPTSSSTVTFQGRYEILNISATFLXXXXXXXXXXXXXXXXXXXXXFMISLVGPRGQIIG 856
                + +TVTF GR++IL++SATFL                     F +SL GP+GQI+G
Sbjct: 137  PAGATVATVTFHGRFDILSMSATFL----------HHASPAAIPNAFAVSLSGPQGQIVG 186

Query: 857  GSVAGPVITAGTVFIVAGSFDNPSYHRLPIEDDVPKSVSDENLTSNEPLVQSCGMTS--- 1027
            G VAG ++ AGTVF++A SF+NPSYHRL  E++   +       +  P V   G+ S   
Sbjct: 187  GFVAGRLLAAGTVFVIAASFNNPSYHRLSSEEEAQNNSGGGAGDAQSPPVSGGGLESGHV 246

Query: 1028 -----MYRSHVPSNSSDLIWAPTPRP 1090
                 MY  H+P   SD+IWAPTPRP
Sbjct: 247  PAESFMYSCHLP---SDVIWAPTPRP 269


>ref|XP_003602928.1| hypothetical protein MTR_3g100470 [Medicago truncatula]
            gi|355491976|gb|AES73179.1| hypothetical protein
            MTR_3g100470 [Medicago truncatula]
          Length = 290

 Score =  213 bits (543), Expect = 1e-52
 Identities = 126/272 (46%), Positives = 164/272 (60%), Gaps = 14/272 (5%)
 Frame = +2

Query: 329  PTSEEESNGPDGCISKKPKLETELERGSGGQEDGTIEVAKRPRGRPPGSKNKPKPPIIIT 508
            P  E+++N   G ++   K  T    G G     TIEV++RPRGRPPGSKNKPKPPIIIT
Sbjct: 42   PIGEDDNNNTSGGVATTQKPNTS---GDGA----TIEVSRRPRGRPPGSKNKPKPPIIIT 94

Query: 509  RESEFCAMRPLFLELPNGLDLIDAIARFTHRRNIGLTVLTASGSVANVSFRQSSVNINPT 688
            R+ E   M P  L++  G D+++AI+ F+ R+NIGL VLT SG+VANV+ RQ S     T
Sbjct: 95   RDPE-TVMSPFILDISGGNDVVEAISEFSRRKNIGLCVLTGSGTVANVTLRQPST----T 149

Query: 689  SSSTVTFQGRYEILNISATFLXXXXXXXXXXXXXXXXXXXXXFMISLVGPRGQIIGGSVA 868
              +TVTF GR++IL+I+ATF+                     F ISL GP+GQI+GG VA
Sbjct: 150  PGTTVTFHGRFDILSITATFVPQQHGVSPAIPSN--------FSISLAGPQGQIVGGIVA 201

Query: 869  GPVITAGTVFIVAGSFDNPSYHRLPIEDDVPKSVSDENLTSNEPLV-------------- 1006
            G +I AGTVF++A SF+NPSYHRLP+E+D   +        N   V              
Sbjct: 202  GNLIAAGTVFVIASSFNNPSYHRLPLEEDEGGNSVSGGGEGNSQNVSGAVDSGQGQGGGG 261

Query: 1007 QSCGMTSMYRSHVPSNSSDLIWAPTPRPSAPF 1102
            +SCGM SMY  H+P  SSD+IWAP+ RP  P+
Sbjct: 262  ESCGM-SMYNCHLP--SSDVIWAPSARPPPPY 290


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