BLASTX nr result

ID: Coptis25_contig00017193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017193
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165024.1| PREDICTED: uncharacterized protein LOC101230...    59   4e-07
ref|XP_004146240.1| PREDICTED: GTPase-activating protein gyp7-li...    59   4e-07
dbj|BAK08188.1| predicted protein [Hordeum vulgare subsp. vulgare]     58   7e-07
emb|CBI34582.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002280223.1| PREDICTED: GTPase-activating protein gyp7-li...    57   2e-06

>ref|XP_004165024.1| PREDICTED: uncharacterized protein LOC101230658 [Cucumis sativus]
          Length = 577

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/39 (69%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
 Frame = -2

Query: 115 EMGSLKSPWSRR-RKNALSYQQWRNLFTTEGKFRDGGVK 2
           + G LKSPWSR+ RK+ALS QQWR+LFT +GK RDGG+K
Sbjct: 78  DRGRLKSPWSRKKRKHALSPQQWRSLFTPDGKLRDGGIK 116


>ref|XP_004146240.1| PREDICTED: GTPase-activating protein gyp7-like [Cucumis sativus]
          Length = 576

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/39 (69%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
 Frame = -2

Query: 115 EMGSLKSPWSRR-RKNALSYQQWRNLFTTEGKFRDGGVK 2
           + G LKSPWSR+ RK+ALS QQWR+LFT +GK RDGG+K
Sbjct: 77  DRGRLKSPWSRKKRKHALSPQQWRSLFTPDGKLRDGGIK 115


>dbj|BAK08188.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 552

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/36 (69%), Positives = 28/36 (77%)
 Frame = -2

Query: 109 GSLKSPWSRRRKNALSYQQWRNLFTTEGKFRDGGVK 2
           G +KSPW RRRK AL  ++WR LFT EGKF DGGVK
Sbjct: 51  GGIKSPWRRRRKTALGPKEWRGLFTPEGKFYDGGVK 86


>emb|CBI34582.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
 Frame = -2

Query: 115 EMGSLKSPWSRRR-KNALSYQQWRNLFTTEGKFRDGGVK 2
           + G+LKSPWSRRR K+AL  +QW++LFT +GKF DGGVK
Sbjct: 56  DRGTLKSPWSRRRRKHALLAKQWKSLFTPDGKFTDGGVK 94


>ref|XP_002280223.1| PREDICTED: GTPase-activating protein gyp7-like isoform 1 [Vitis
           vinifera]
          Length = 554

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
 Frame = -2

Query: 115 EMGSLKSPWSRRR-KNALSYQQWRNLFTTEGKFRDGGVK 2
           + G+LKSPWSRRR K+AL  +QW++LFT +GKF DGGVK
Sbjct: 56  DRGTLKSPWSRRRRKHALLAKQWKSLFTPDGKFTDGGVK 94


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